FFCP PHASE1:Hg19::chr15:27216206..27216227,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2567 | |EntrezGene=2567 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4088 | |HGNC=4088 | ||
|TSSclassifier=strong | |||
|UniProt=Q99928 | |UniProt=Q99928 | ||
|association_with_transcript=-201bp_to_ENST00000333743,NM_033223_5end | |association_with_transcript=-201bp_to_ENST00000333743,NM_033223_5end | ||
|cluster_id=chr15:27216206..27216227,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_5_at_GABRG3_5end | |description=CAGE_peak_5_at_GABRG3_5end | ||
|id=chr15:27216206..27216227,+ | |id=chr15:27216206..27216227,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.46e-08;82!UBERON:0005425;6.40e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.37e-48!57;UBERON:0005068!9.37e-48!57;UBERON:0006241!9.37e-48!57;UBERON:0007135!9.37e-48!57;UBERON:0002780!1.20e-44!41;UBERON:0001890!1.20e-44!41;UBERON:0006240!1.20e-44!41;UBERON:0003080!2.31e-43!42;UBERON:0002616!3.50e-43!59;UBERON:0001869!3.07e-42!32;UBERON:0002020!3.12e-42!34;UBERON:0003528!3.12e-42!34;UBERON:0001893!4.69e-42!34;UBERON:0000955!2.70e-41!69;UBERON:0006238!2.70e-41!69;UBERON:0002791!4.05e-40!33;UBERON:0000073!1.46e-38!94;UBERON:0001016!1.46e-38!94;UBERON:0001017!1.69e-38!82;UBERON:0000956!3.81e-36!25;UBERON:0000203!3.81e-36!25;UBERON:0005743!4.10e-36!86;UBERON:0003075!5.86e-36!86;UBERON:0007284!5.86e-36!86;UBERON:0002346!1.84e-35!90;UBERON:0002619!1.92e-34!22;UBERON:0003056!1.99e-32!61;UBERON:0001950!6.98e-31!20;UBERON:0007023!6.63e-29!115;UBERON:0000153!1.42e-25!129;UBERON:0007811!1.42e-25!129;UBERON:0000033!5.60e-25!123;UBERON:0000924!1.90e-21!173;UBERON:0006601!1.90e-21!173;UBERON:0004121!2.69e-21!169;UBERON:0000064!1.01e-13!219;UBERON:0000200!2.95e-13!6;UBERON:0000025!5.48e-12!194;UBERON:0000475!7.71e-12!365;UBERON:0002021!1.28e-11!5;UBERON:0000481!1.12e-09!347;UBERON:0001871!1.31e-09!7;UBERON:0000477!1.78e-09!286;UBERON:0000483!2.32e-09!309;UBERON:0000119!3.96e-09!312;UBERON:0000922!8.76e-09!612;UBERON:0004111!2.66e-08!241;UBERON:0004732!2.82e-08!13;UBERON:0000062!4.45e-08!511;UBERON:0002308!5.20e-08!9;UBERON:0000125!5.20e-08!9;UBERON:0001872!9.75e-08!5;UBERON:0002771!1.76e-07!3;UBERON:0000349!3.98e-07!5;UBERON:0000468!5.08e-07!659;UBERON:0003076!6.91e-07!15;UBERON:0003057!6.91e-07!15;UBERON:0004733!8.16e-07!12;UBERON:0002028!8.16e-07!12;UBERON:0007277!8.16e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.02e-59;20!UBERON:0002619;5.01e-54;22!UBERON:0001869;2.10e-52;32!UBERON:0002791;1.72e-48;32!UBERON:0001893;2.25e-48;34!UBERON:0000956;1.73e-47;25!UBERON:0000203;1.73e-47;25!UBERON:0003528;3.79e-47;34!UBERON:0002020;3.79e-47;34!UBERON:0002780;2.07e-38;41!UBERON:0001890;2.07e-38;41!UBERON:0002021;1.86e-33;5!UBERON:0000073;1.57e-27;53!UBERON:0002616;1.57e-27;53!UBERON:0001872;1.10e-21;5!UBERON:0000955;1.32e-18;68!UBERON:0000200;9.15e-18;6!UBERON:0001017;9.98e-16;75!UBERON:0000369;1.18e-15;4!UBERON:0002435;1.18e-15;4!UBERON:0000204;1.18e-15;4!UBERON:0001016;2.14e-13;83!UBERON:0000125;4.69e-12;9!UBERON:0002308;4.69e-12;9!UBERON:0005383;5.86e-10;3!UBERON:0005382;5.86e-10;3!UBERON:0001870;9.79e-10;3!UBERON:0009663;3.63e-09;7!UBERON:0001874;2.90e-08;1!UBERON:0002581;6.40e-08;1!UBERON:0002902;6.40e-08;1!UBERON:0001882;6.40e-08;1!UBERON:0002022;6.40e-08;1!UBERON:0005795;6.40e-08;1!UBERON:0000941;6.40e-08;1!UBERON:0001785;6.40e-08;1!UBERON:0002464;6.40e-08;1!UBERON:0004904;6.40e-08;1!UBERON:0001021;6.40e-08;1!UBERON:0009899;6.40e-08;1!UBERON:0007190;6.40e-08;1!UBERON:0005403;6.40e-08;1!UBERON:0002420;3.14e-07;9!UBERON:0007245;3.14e-07;9!UBERON:0010009;3.14e-07;9!UBERON:0010011;3.14e-07;9!UBERON:0000454;3.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,5.80e-62,32;UBERON:0001950,1.17e-59,20;UBERON:0001893,3.18e-58,34;UBERON:0003528,4.81e-58,34;UBERON:0002020,4.81e-58,34;UBERON:0002791,4.34e-55,32;UBERON:0002619,3.05e-54,22;UBERON:0002780,9.15e-54,41;UBERON:0001890,9.15e-54,41;UBERON:0003080,9.15e-54,41;UBERON:0006240,9.15e-54,41;UBERON:0000956,1.12e-47,25;UBERON:0000203,1.12e-47,25;UBERON:0000073,1.58e-45,53;UBERON:0002616,1.58e-45,53;UBERON:0001049,6.28e-43,56;UBERON:0005068,6.28e-43,56;UBERON:0006241,6.28e-43,56;UBERON:0007135,6.28e-43,56;UBERON:0003056,3.28e-39,61;UBERON:0000955,4.89e-38,68;UBERON:0006238,4.89e-38,68;UBERON:0002021,3.21e-33,5;UBERON:0001017,1.91e-31,81;UBERON:0003075,2.30e-31,82;UBERON:0007284,2.30e-31,82;UBERON:0001016,6.47e-31,89;UBERON:0002346,9.77e-30,86;UBERON:0010371,1.88e-26,104;UBERON:0001872,7.62e-22,5;UBERON:0010314,4.90e-18,132;UBERON:0000200,6.18e-18,6;UBERON:0004121,6.86e-16,171;UBERON:0000924,6.86e-16,171;UBERON:0006601,6.86e-16,171;UBERON:0000369,1.25e-15,4;UBERON:0002435,1.25e-15,4;UBERON:0000204,1.25e-15,4;UBERON:0010082,1.25e-15,4;UBERON:0007023,1.99e-13,114;UBERON:0011216,1.65e-12,223;UBERON:0000125,6.02e-12,9;UBERON:0002308,6.02e-12,9;UBERON:0000025,3.50e-11,192;UBERON:0005383,7.18e-10,3;UBERON:0005382,7.18e-10,3;UBERON:0001870,8.97e-10,3;UBERON:0009663,3.74e-09,7;UBERON:0001874,2.90e-08,1;UBERON:0004111,3.91e-08,240;UBERON:0007190,4.71e-08,1;UBERON:0001882,5.05e-08,1;UBERON:0005403,5.05e-08,1;UBERON:0002022,5.40e-08,1;UBERON:0000483,6.02e-08,306;UBERON:0002581,6.63e-08,1;UBERON:0000941,7.10e-08,1;UBERON:0001785,7.10e-08,1;UBERON:0002464,7.10e-08,1;UBERON:0004904,7.10e-08,1;UBERON:0001021,7.10e-08,1;UBERON:0003902,7.10e-08,1;UBERON:0005425,7.10e-08,1;UBERON:0000119,7.96e-08,309;UBERON:0002902,9.29e-08,1;UBERON:0009899,9.29e-08,1;UBERON:0002420,3.21e-07,9;UBERON:0007245,3.21e-07,9;UBERON:0010009,3.21e-07,9;UBERON:0010011,3.21e-07,9;UBERON:0000454,3.21e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.958120975510189,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0.308419387605311,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580024309752732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,18.5790359152634,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.834912883456661,1.99613798001194,0,0,0,0,0,0.472775363535873,0,0,0,0,1.32656082487949,0,0.110579259931225,0,0.87754158861589,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,3.67287313956588,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,1.7727022867646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,3.94331031418972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,1.70098758642469,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,1.19009341568421,0,0,0,0.471612915298998,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.976210119215705,1.3771002377715,0,0.332787154610557,0.310482014706917,0.691743174681154,0,0,1.14186133417987,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.323474434190045,0,0.436838552768056,0,0,0.123935764259002,0,0,0,0.80057074828547,0,0,1.73418907760441,1.41696576325585,1.59633859057151,2.87162909937057,3.02486035466062,1.31398779682014,0.968853873791107,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75597720007826,0,1.65349437200947,1.77564268542939,4.37579847214576,0,0,0,0,0,0,3.03482802118316,0.455324382702595,0,0,0,0.135939465953663,1.44700101838268,0,0,0.078493092850514,2.35673384874003,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.118920090777569,0,0.109940516745429,2.11347980993343,0,0.218559560503957,0,0,0,0,0.594092800654172,0,0,0.0939839179798536,0.515663103788617,0,0,0,0,0,0,0,0,0.883889372481891,4.79985759374415,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0.20686599172379,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0,0.215166616178029,0.332660356546013,0,0,0,0,0,0,1.22068853494722,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.958120975510189,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0.308419387605311,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580024309752732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,18.5790359152634,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.834912883456661,1.99613798001194,0,0,0,0,0,0.472775363535873,0,0,0,0,1.32656082487949,0,0.110579259931225,0,0.87754158861589,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,3.67287313956588,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,1.7727022867646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,3.94331031418972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,1.70098758642469,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,1.19009341568421,0,0,0,0.471612915298998,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.976210119215705,1.3771002377715,0,0.332787154610557,0.310482014706917,0.691743174681154,0,0,1.14186133417987,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.323474434190045,0,0.436838552768056,0,0,0.123935764259002,0,0,0,0.80057074828547,0,0,1.73418907760441,1.41696576325585,1.59633859057151,2.87162909937057,3.02486035466062,1.31398779682014,0.968853873791107,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75597720007826,0,1.65349437200947,1.77564268542939,4.37579847214576,0,0,0,0,0,0,3.03482802118316,0.455324382702595,0,0,0,0.135939465953663,1.44700101838268,0,0,0.078493092850514,2.35673384874003,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.118920090777569,0,0.109940516745429,2.11347980993343,0,0.218559560503957,0,0,0,0,0.594092800654172,0,0,0.0939839179798536,0.515663103788617,0,0,0,0,0,0,0,0,0.883889372481891,4.79985759374415,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0.20686599172379,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0,0.215166616178029,0.332660356546013,0,0,0,0,0,0,1.22068853494722,0,0,0 | ||
|short_description=p5@GABRG3 | |short_description=p5@GABRG3 | ||
}} | }} |
Latest revision as of 01:48, 17 September 2015
Short description: | p5@GABRG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GABRG3_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -201bp_to_ENST00000333743, NM_033223_5end |
EntrezGene: | GABRG3 |
HGNC: | 4088 |
UniProt: | Q99928 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data