FFCP PHASE1:Hg19::chr10:78646980..78646993,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:78646980..78646993,+ | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_at_chr10:78646980..78646993,+ | |description=CAGE_peak_at_chr10:78646980..78646993,+ | ||
|id=chr10:78646980..78646993,+ | |id=chr10:78646980..78646993,+ | ||
|ontology_enrichment_celltype=CL:0002253!2.23e-11!2;CL:0002603!6.34e-08!3 | |ontology_enrichment_celltype=CL:0002253!2.23e-11!2;CL:0002603!6.34e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002253;7.05e-34;2!CL:0002563;1.03e-17;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,7.05e-34,2;CL:0002563,1.03e-17,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!4.75e-09!10 | |ontology_enrichment_disease=DOID:171!4.75e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:171;2.08e-27;10!DOID:3095;3.77e-13;22!DOID:2994;3.77e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.08e-27,10;DOID:3095,3.77e-13,22;DOID:2994,3.77e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0006834!3.45e-21!1;UBERON:0001052!5.72e-21!4;UBERON:0001301!6.31e-21!1;UBERON:0004907!5.45e-17!5;UBERON:0000059!3.03e-08!11;UBERON:0006947!7.26e-08!3;UBERON:0004054!7.26e-08!3;UBERON:0004175!9.91e-08!25 | |ontology_enrichment_uberon=UBERON:0006834!3.45e-21!1;UBERON:0001052!5.72e-21!4;UBERON:0001301!6.31e-21!1;UBERON:0004907!5.45e-17!5;UBERON:0000059!3.03e-08!11;UBERON:0006947!7.26e-08!3;UBERON:0004054!7.26e-08!3;UBERON:0004175!9.91e-08!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.40e-66;4!UBERON:0000923;2.40e-66;4!UBERON:0010316;2.40e-66;4!UBERON:0005291;2.40e-66;4!UBERON:0002050;2.19e-53;5!UBERON:0005423;2.19e-53;5!UBERON:0001052;1.03e-17;4!UBERON:0001242;1.03e-17;4!UBERON:0001262;1.03e-17;4!UBERON:0004786;1.03e-17;4!UBERON:0004808;1.03e-17;4!UBERON:0001277;1.03e-17;4!UBERON:0004907;1.83e-14;5!UBERON:0000485;9.89e-11;7!UBERON:0003929;9.89e-11;7!UBERON:0003350;1.47e-09;8!UBERON:0001155;1.21e-08;9!UBERON:0000059;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.03e-17,4;UBERON:0001242,1.03e-17,4;UBERON:0001262,1.03e-17,4;UBERON:0004786,1.03e-17,4;UBERON:0004808,1.03e-17,4;UBERON:0001277,1.03e-17,4;UBERON:0004907,1.83e-14,5;UBERON:0003350,1.47e-09,8;UBERON:0001155,1.21e-08,9;UBERON:0000485,1.21e-08,9;UBERON:0000059,2.63e-07,11 | |||
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|short_description=p@chr10:78646980..78646993,+ | |short_description=p@chr10:78646980..78646993,+ | ||
}} | }} |
Latest revision as of 15:46, 23 July 2015
Short description: | p@chr10:78646980..78646993, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:78646980..78646993, + |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 7.05e-34 | 2 |
intestinal epithelial cell | 1.03e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.03e-17 | 4 |
intestinal mucosa | 1.03e-17 | 4 |
wall of intestine | 1.03e-17 | 4 |
gastrointestinal system mucosa | 1.03e-17 | 4 |
gastrointestinal system epithelium | 1.03e-17 | 4 |
intestinal epithelium | 1.03e-17 | 4 |
lower digestive tract | 1.83e-14 | 5 |
epithelium of mucosa | 1.47e-09 | 8 |
colon | 1.21e-08 | 9 |
simple columnar epithelium | 1.21e-08 | 9 |
large intestine | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.08e-27 | 10 |
germ cell and embryonal cancer | 3.77e-13 | 22 |
germ cell cancer | 3.77e-13 | 22 |