FFCP PHASE1:Hg19::chr10:75012310..75012337,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51021 | |EntrezGene=51021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14048 | |HGNC=14048 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_ENST00000479005_5end | |association_with_transcript=45bp_to_ENST00000479005_5end | ||
|cluster_id=chr10:75012310..75012337,- | |||
|description=CAGE_peak_2_at_MRPS16_5end | |description=CAGE_peak_2_at_MRPS16_5end | ||
|id=chr10:75012310..75012337,- | |id=chr10:75012310..75012337,- | ||
|ontology_enrichment_celltype=CL:0000066!1.27e-30!254;CL:0000012!1.24e-24!682;CL:0000548!4.30e-24!679;CL:0000004!4.30e-24!679;CL:0000255!4.30e-24!679;CL:0002321!1.11e-21!248;CL:0000220!9.50e-21!246;CL:0000003!3.18e-14!722;CL:0000144!7.26e-11!625;CL:0000222!2.83e-10!119;CL:0000076!4.07e-08!62;CL:0000063!4.53e-07!578;CL:0000055!8.38e-07!180;CL:0000213!8.54e-07!57;CL:0000215!8.54e-07!57 | |ontology_enrichment_celltype=CL:0000066!1.27e-30!254;CL:0000012!1.24e-24!682;CL:0000548!4.30e-24!679;CL:0000004!4.30e-24!679;CL:0000255!4.30e-24!679;CL:0002321!1.11e-21!248;CL:0000220!9.50e-21!246;CL:0000003!3.18e-14!722;CL:0000144!7.26e-11!625;CL:0000222!2.83e-10!119;CL:0000076!4.07e-08!62;CL:0000063!4.53e-07!578;CL:0000055!8.38e-07!180;CL:0000213!8.54e-07!57;CL:0000215!8.54e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.06e-30,253;CL:0002321,5.52e-22,250;CL:0000222,1.69e-10,121;CL:0000076,2.55e-08,63;CL:0000213,4.07e-07,58;CL:0000215,4.07e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.20e-24!239;DOID:162!3.17e-24!235;DOID:0050687!1.61e-16!143;DOID:305!7.93e-14!106;DOID:0050686!1.43e-09!137;DOID:3095!1.70e-07!22;DOID:2994!1.70e-07!22 | |ontology_enrichment_disease=DOID:14566!2.20e-24!239;DOID:162!3.17e-24!235;DOID:0050687!1.61e-16!143;DOID:305!7.93e-14!106;DOID:0050686!1.43e-09!137;DOID:3095!1.70e-07!22;DOID:2994!1.70e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.85e-07;22!DOID:2994;1.85e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.15e-24,239;DOID:162,3.10e-24,235;DOID:0050687,1.58e-16,143;DOID:305,7.83e-14,106;DOID:0050686,1.42e-09,137;DOID:3095,1.69e-07,22;DOID:2994,1.69e-07,22 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,1.42e-09,148;UBERON:0002100,2.97e-09,199;UBERON:0003104,2.96e-07,160;UBERON:0009142,2.96e-07,160 | |||
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| ||
|short_description=p2@MRPS16 | |short_description=p2@MRPS16 | ||
}} | }} |
Latest revision as of 06:48, 19 September 2015
Short description: | p2@MRPS16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MRPS16_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENST00000479005_5end |
EntrezGene: | MRPS16 |
HGNC: | 14048 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.06e-30 | 253 |
embryonic cell | 5.52e-22 | 250 |
mesodermal cell | 1.69e-10 | 121 |
squamous epithelial cell | 2.55e-08 | 63 |
lining cell | 4.07e-07 | 58 |
barrier cell | 4.07e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 1.42e-09 | 148 |
trunk | 2.97e-09 | 199 |
mesenchyme | 2.96e-07 | 160 |
entire embryonic mesenchyme | 2.96e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.15e-24 | 239 |
cancer | 3.10e-24 | 235 |
cell type cancer | 1.58e-16 | 143 |
carcinoma | 7.83e-14 | 106 |
organ system cancer | 1.42e-09 | 137 |
germ cell and embryonal cancer | 1.69e-07 | 22 |
germ cell cancer | 1.69e-07 | 22 |