FFCP PHASE1:Hg19::chr10:72201370..72201379,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4838 | |EntrezGene=4838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7865 | |HGNC=7865 | ||
|TSSclassifier=strong | |||
|UniProt=Q96S42 | |UniProt=Q96S42 | ||
|association_with_transcript=-11bp_to_BC033585_5end | |association_with_transcript=-11bp_to_BC033585_5end | ||
|cluster_id=chr10:72201370..72201379,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_2_at_NODAL_5end | |description=CAGE_peak_2_at_NODAL_5end | ||
|id=chr10:72201370..72201379,- | |id=chr10:72201370..72201379,- | ||
|ontology_enrichment_celltype=CL:0002322!3.69e-34!5;CL:0000039!2.37e-16!7;CL:0000586!2.37e-16!7;CL:0000540!6.04e-11!6;CL:0000031!6.04e-11!6;CL:0000404!6.04e-11!6;CL:0000047!2.53e-08!8 | |ontology_enrichment_celltype=CL:0002322!3.69e-34!5;CL:0000039!2.37e-16!7;CL:0000586!2.37e-16!7;CL:0000540!6.04e-11!6;CL:0000031!6.04e-11!6;CL:0000404!6.04e-11!6;CL:0000047!2.53e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.85e-37;7!CL:0000586;3.85e-37;7!CL:0002322;2.27e-23;5!CL:0002321;1.78e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.40e-37,7;CL:0000586,3.40e-37,7;CL:0002322,2.54e-23,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.78e-26;10!UBERON:0005564;2.78e-26;10 | |||
|ontology_enrichment_disease=DOID:3095!9.17e-08!22;DOID:2994!9.17e-08!22 | |ontology_enrichment_disease=DOID:3095!9.17e-08!22;DOID:2994!9.17e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.17e-12;22!DOID:2994;2.17e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.09e-12,22;DOID:2994,2.09e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.50e-14!8;UBERON:0003135!1.87e-10!11;UBERON:0001017!4.20e-09!82;UBERON:0005743!1.36e-08!86;UBERON:0007190!7.10e-08!1;UBERON:0002581!7.59e-08!1;UBERON:0002336!1.06e-07!1;UBERON:0001018!1.06e-07!1;UBERON:0002473!1.06e-07!1;UBERON:0005340!1.06e-07!1;UBERON:0002316!1.06e-07!1;UBERON:0003544!1.06e-07!1;UBERON:0001020!1.06e-07!1;UBERON:0005970!1.06e-07!1;UBERON:0002437!1.06e-07!1;UBERON:0001882!1.21e-07!1;UBERON:0005403!1.21e-07!1;UBERON:0000073!1.35e-07!94;UBERON:0001016!1.35e-07!94 | |ontology_enrichment_uberon=UBERON:0000473!2.50e-14!8;UBERON:0003135!1.87e-10!11;UBERON:0001017!4.20e-09!82;UBERON:0005743!1.36e-08!86;UBERON:0007190!7.10e-08!1;UBERON:0002581!7.59e-08!1;UBERON:0002336!1.06e-07!1;UBERON:0001018!1.06e-07!1;UBERON:0002473!1.06e-07!1;UBERON:0005340!1.06e-07!1;UBERON:0002316!1.06e-07!1;UBERON:0003544!1.06e-07!1;UBERON:0001020!1.06e-07!1;UBERON:0005970!1.06e-07!1;UBERON:0002437!1.06e-07!1;UBERON:0001882!1.21e-07!1;UBERON:0005403!1.21e-07!1;UBERON:0000073!1.35e-07!94;UBERON:0001016!1.35e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.28e-32;8!UBERON:0003135;5.65e-24;11!UBERON:0000991;6.06e-13;21!UBERON:0003101;2.17e-12;22!UBERON:0000079;2.17e-12;22!UBERON:0000922;6.89e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.15e-32,8;UBERON:0003135,5.23e-24,11;UBERON:0000991,5.82e-13,21;UBERON:0009196,5.82e-13,21;UBERON:0009117,5.82e-13,21;UBERON:0005564,5.82e-13,21;UBERON:0004176,2.09e-12,22;UBERON:0003101,2.09e-12,22;UBERON:0000079,2.09e-12,22 | |||
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|short_description=p2@NODAL | |short_description=p2@NODAL | ||
}} | }} |
Latest revision as of 02:03, 19 September 2015
Short description: | p2@NODAL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NODAL_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -11bp_to_BC033585_5end |
EntrezGene: | NODAL |
HGNC: | 7865 |
UniProt: | Q96S42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.40e-37 | 7 |
germ cell | 3.40e-37 | 7 |
embryonic stem cell | 2.54e-23 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 1.15e-32 | 8 |
male reproductive organ | 5.23e-24 | 11 |
gonad | 5.82e-13 | 21 |
indifferent external genitalia | 5.82e-13 | 21 |
indifferent gonad | 5.82e-13 | 21 |
gonad primordium | 5.82e-13 | 21 |
external genitalia | 2.09e-12 | 22 |
male organism | 2.09e-12 | 22 |
male reproductive system | 2.09e-12 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.09e-12 | 22 |
germ cell cancer | 2.09e-12 | 22 |