FFCP PHASE1:Hg19::chr14:63671393..63671437,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57381 | |EntrezGene=57381 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=688 | |HGNC=688 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000557133_5end | |association_with_transcript=0bp_to_ENST00000557133_5end | ||
|cluster_id=chr14:63671393..63671437,+ | |||
|coexpression_cluster_id=C1376 | |||
|description=CAGE_peak_2_at_RHOJ_5end | |description=CAGE_peak_2_at_RHOJ_5end | ||
|id=chr14:63671393..63671437,+ | |id=chr14:63671393..63671437,+ | ||
|ontology_enrichment_celltype=CL:0002139!5.82e-21!24;CL:0000222!4.42e-20!119;CL:0000115!1.10e-19!35;CL:0000359!1.99e-19!32;CL:0000071!5.09e-16!18;CL:0002546!5.09e-16!18;CL:0000192!8.50e-15!42;CL:0000514!8.50e-15!42;CL:0002078!1.05e-14!44;CL:0000183!5.53e-14!59;CL:0000187!3.19e-13!54;CL:0000680!3.54e-12!57;CL:0000056!3.54e-12!57;CL:0000355!3.54e-12!57;CL:0000055!7.34e-12!180;CL:0000393!5.60e-11!60;CL:0000211!5.60e-11!60;CL:0000213!2.99e-09!57;CL:0000215!2.99e-09!57;CL:1000413!7.15e-09!9;CL:0002539!2.79e-08!10;CL:0002494!2.58e-07!16 | |ontology_enrichment_celltype=CL:0002139!5.82e-21!24;CL:0000222!4.42e-20!119;CL:0000115!1.10e-19!35;CL:0000359!1.99e-19!32;CL:0000071!5.09e-16!18;CL:0002546!5.09e-16!18;CL:0000192!8.50e-15!42;CL:0000514!8.50e-15!42;CL:0002078!1.05e-14!44;CL:0000183!5.53e-14!59;CL:0000187!3.19e-13!54;CL:0000680!3.54e-12!57;CL:0000056!3.54e-12!57;CL:0000355!3.54e-12!57;CL:0000055!7.34e-12!180;CL:0000393!5.60e-11!60;CL:0000211!5.60e-11!60;CL:0000213!2.99e-09!57;CL:0000215!2.99e-09!57;CL:1000413!7.15e-09!9;CL:0002539!2.79e-08!10;CL:0002494!2.58e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.05e-32;24!CL:0000115;1.19e-25;36!CL:0000071;2.47e-24;18!CL:0000359;6.21e-24;32!CL:0002078;3.10e-14;45!CL:1000413;4.49e-13;9!CL:0002539;4.56e-12;10!CL:0000192;5.85e-12;43!CL:0000213;4.54e-10;58!CL:0000215;4.54e-10;58!CL:0002494;4.90e-10;16!CL:0002138;2.58e-09;6!CL:0002544;2.67e-09;6!CL:0002543;5.61e-09;6!CL:0002595;5.28e-07;5!CL:0002548;5.62e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.99e-32,24;CL:0000115,2.64e-30,36;CL:0000222,1.53e-26,121;CL:0000359,5.63e-25,32;CL:0000071,2.54e-24,18;CL:0002546,2.54e-24,18;CL:0002078,7.63e-22,45;CL:0000192,4.85e-16,43;CL:0000514,4.85e-16,43;CL:0000213,1.76e-15,58;CL:0000215,1.76e-15,58;CL:0000187,2.21e-13,55;CL:1000413,4.61e-13,9;CL:0000680,3.48e-12,58;CL:0000056,3.48e-12,58;CL:0000355,3.48e-12,58;CL:0002539,3.91e-12,10;CL:0002321,1.50e-11,250;CL:0000393,4.08e-11,61;CL:0000211,4.08e-11,61;CL:0002494,4.13e-10,16;CL:0005020,2.47e-09,6;CL:0002138,2.47e-09,6;CL:0005022,2.47e-09,6;CL:0002544,2.71e-09,6;CL:0002543,5.50e-09,6;CL:0002548,3.46e-07,6;CL:0002595,4.12e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.47e-24;18!CL:0000514;5.85e-12;43!CL:0005022;2.58e-09;6!CL:0000222;1.82e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.43e-47!79;UBERON:0007798!2.43e-47!79;UBERON:0000055!6.48e-41!69;UBERON:0004872!1.10e-39!84;UBERON:0001981!3.77e-39!60;UBERON:0007500!3.77e-39!60;UBERON:0004537!3.77e-39!60;UBERON:0006965!3.77e-39!60;UBERON:0001009!9.00e-39!113;UBERON:0004535!3.22e-38!110;UBERON:0001637!1.43e-29!42;UBERON:0003509!1.43e-29!42;UBERON:0004572!1.43e-29!42;UBERON:0000025!5.51e-28!194;UBERON:0000477!8.54e-27!286;UBERON:0004111!4.43e-26!241;UBERON:0003914!9.09e-24!118;UBERON:0004573!1.33e-23!33;UBERON:0004571!1.33e-23!33;UBERON:0000119!7.21e-22!312;UBERON:0000483!1.55e-20!309;UBERON:0001986!5.09e-16!18;UBERON:0004638!5.09e-16!18;UBERON:0004852!5.09e-16!18;UBERON:0000947!1.59e-15!21;UBERON:0010191!1.59e-15!21;UBERON:0000487!8.73e-13!22;UBERON:0000468!1.12e-12!659;UBERON:0000490!4.69e-12!138;UBERON:0002346!6.63e-12!90;UBERON:0006914!8.19e-12!25;UBERON:0002385!2.10e-11!63;UBERON:0001015!2.10e-11!63;UBERON:0000383!2.10e-11!63;UBERON:0003075!2.32e-11!86;UBERON:0007284!2.32e-11!86;UBERON:0001134!5.64e-11!61;UBERON:0002036!5.64e-11!61;UBERON:0003082!5.64e-11!61;UBERON:0002616!1.60e-10!59;UBERON:0007023!1.66e-10!115;UBERON:0000467!1.98e-10!625;UBERON:0000480!2.76e-10!626;UBERON:0007100!6.99e-10!27;UBERON:0000955!1.03e-09!69;UBERON:0006238!1.03e-09!69;UBERON:0001017!1.39e-09!82;UBERON:0004290!1.64e-09!70;UBERON:0000948!1.74e-09!24;UBERON:0005498!1.74e-09!24;UBERON:0004140!1.74e-09!24;UBERON:0009881!1.74e-09!24;UBERON:0004141!1.74e-09!24;UBERON:0003084!1.74e-09!24;UBERON:0007005!1.74e-09!24;UBERON:0004139!1.74e-09!24;UBERON:0004291!1.74e-09!24;UBERON:0005743!2.00e-09!86;UBERON:0001049!4.08e-09!57;UBERON:0005068!4.08e-09!57;UBERON:0006241!4.08e-09!57;UBERON:0007135!4.08e-09!57;UBERON:0003915!7.15e-09!9;UBERON:0004700!7.15e-09!9;UBERON:0001917!7.15e-09!9;UBERON:0001893!7.53e-09!34;UBERON:0000073!7.84e-09!94;UBERON:0001016!7.84e-09!94;UBERON:0000475!8.77e-09!365;UBERON:0002020!1.30e-08!34;UBERON:0003528!1.30e-08!34;UBERON:0002791!1.40e-08!33;UBERON:0001869!1.76e-08!32;UBERON:0003056!2.75e-08!61;UBERON:0004237!2.79e-08!10;UBERON:0004695!2.79e-08!10;UBERON:0002111!2.79e-08!10;UBERON:0004178!2.79e-08!10;UBERON:0002780!4.83e-08!41;UBERON:0001890!4.83e-08!41;UBERON:0006240!4.83e-08!41;UBERON:0000914!6.91e-08!83;UBERON:0002329!6.91e-08!83;UBERON:0003077!6.91e-08!83;UBERON:0003059!6.91e-08!83;UBERON:0007282!6.91e-08!83;UBERON:0009618!6.91e-08!83;UBERON:0007285!6.91e-08!83;UBERON:0000481!1.22e-07!347;UBERON:0003080!1.31e-07!42;UBERON:0001135!3.90e-07!15;UBERON:0000956!6.68e-07!25;UBERON:0000203!6.68e-07!25;UBERON:0000033!6.92e-07!123;UBERON:0000153!7.60e-07!129;UBERON:0007811!7.60e-07!129 | |||
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| ||
|short_description=p2@RHOJ | |short_description=p2@RHOJ | ||
}} | }} |
Latest revision as of 00:04, 25 September 2015
Short description: | p2@RHOJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RHOJ_5end |
Coexpression cluster: | C1376_Endothelial_adipose_Lymphatic_Aortic_Smooth_breast_Hepatic |
Association with transcript: | 0bp_to_ENST00000557133_5end |
EntrezGene: | RHOJ |
HGNC: | 688 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.99e-32 | 24 |
endothelial cell | 2.64e-30 | 36 |
mesodermal cell | 1.53e-26 | 121 |
vascular associated smooth muscle cell | 5.63e-25 | 32 |
blood vessel endothelial cell | 2.54e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.54e-24 | 18 |
meso-epithelial cell | 7.63e-22 | 45 |
smooth muscle cell | 4.85e-16 | 43 |
smooth muscle myoblast | 4.85e-16 | 43 |
lining cell | 1.76e-15 | 58 |
barrier cell | 1.76e-15 | 58 |
muscle cell | 2.21e-13 | 55 |
endothelial cell of artery | 4.61e-13 | 9 |
muscle precursor cell | 3.48e-12 | 58 |
myoblast | 3.48e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.48e-12 | 58 |
aortic smooth muscle cell | 3.91e-12 | 10 |
embryonic cell | 1.50e-11 | 250 |
electrically responsive cell | 4.08e-11 | 61 |
electrically active cell | 4.08e-11 | 61 |
cardiocyte | 4.13e-10 | 16 |
lymphangioblast | 2.47e-09 | 6 |
endothelial cell of lymphatic vessel | 2.47e-09 | 6 |
vascular lymphangioblast | 2.47e-09 | 6 |
aortic endothelial cell | 2.71e-09 | 6 |
vein endothelial cell | 5.50e-09 | 6 |
cardiac fibroblast | 3.46e-07 | 6 |
smooth muscle cell of the subclavian artery | 4.12e-07 | 5 |