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FFCP PHASE1:Mm9::chr6:122436270..122436322,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108653
|EntrezGene=108653
|HGNC=
|HGNC=
|MCL_coexpression_id=2275
|TSSclassifier=NA
|UniProt=Q80WS1
|UniProt=Q80WS1
|association_with_transcript=0bp_to_NM_027664,uc009dpg.1_5end
|association_with_transcript=0bp_to_NM_027664,uc009dpg.1_5end
|cluster_id=chr6:122436270..122436322,-
|description=CAGE_peak_5_at_Rimklb_5end
|description=CAGE_peak_5_at_Rimklb_5end
|id=chr6:122436270..122436322,-
|id=chr6:122436270..122436322,-
|ontology_enrichment_celltype=CL:0000117!5.61e-16!23;CL:0000337!5.61e-16!23;CL:0000540!2.52e-12!33;CL:0000047!2.52e-12!33;CL:0000031!2.52e-12!33;CL:0000404!2.52e-12!33;CL:0000221!4.88e-11!44;CL:0000133!4.88e-11!44;CL:0002319!1.83e-10!43;CL:0000393!2.15e-08!39;CL:0000211!2.15e-08!39;CL:0000055!4.75e-07!50
|ontology_enrichment_celltype=CL:0000117!5.61e-16!23;CL:0000337!5.61e-16!23;CL:0000540!2.52e-12!33;CL:0000047!2.52e-12!33;CL:0000031!2.52e-12!33;CL:0000404!2.52e-12!33;CL:0000221!4.88e-11!44;CL:0000133!4.88e-11!44;CL:0002319!1.83e-10!43;CL:0000393!2.15e-08!39;CL:0000211!2.15e-08!39;CL:0000055!4.75e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-26,23;CL:0000337,1.02e-26,23;CL:0000540,5.56e-18,33;CL:0000047,5.56e-18,33;CL:0000031,5.56e-18,33;CL:0000404,5.56e-18,33;CL:0000393,5.16e-14,39;CL:0000211,5.16e-14,39;CL:0000221,6.99e-13,44;CL:0000133,6.99e-13,44;CL:0002319,5.24e-12,43;CL:0002609,7.78e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.37e-23!63;UBERON:0001017!7.65e-22!73;UBERON:0005743!7.65e-22!73;UBERON:0002346!8.30e-22!71;UBERON:0003075!8.30e-22!71;UBERON:0007284!8.30e-22!71;UBERON:0001049!1.60e-21!52;UBERON:0005068!1.60e-21!52;UBERON:0006241!1.60e-21!52;UBERON:0007135!1.60e-21!52;UBERON:0000073!3.98e-21!75;UBERON:0001016!3.98e-21!75;UBERON:0003056!6.73e-21!49;UBERON:0004121!4.77e-19!102;UBERON:0000924!4.77e-19!102;UBERON:0006601!4.77e-19!102;UBERON:0000955!7.30e-19!50;UBERON:0006238!7.30e-19!50;UBERON:0002616!1.14e-18!49;UBERON:0002020!3.68e-16!34;UBERON:0003080!4.99e-16!40;UBERON:0002780!1.85e-15!39;UBERON:0001890!1.85e-15!39;UBERON:0006240!1.85e-15!39;UBERON:0000153!8.97e-14!94;UBERON:0007811!3.15e-13!86;UBERON:0002791!1.52e-12!29;UBERON:0003528!1.52e-12!29;UBERON:0001893!1.52e-12!29;UBERON:0000956!4.06e-09!21;UBERON:0001869!4.06e-09!21;UBERON:0000203!4.06e-09!21;UBERON:0002619!3.44e-07!17
|ontology_enrichment_uberon=UBERON:0000033!1.37e-23!63;UBERON:0001017!7.65e-22!73;UBERON:0005743!7.65e-22!73;UBERON:0002346!8.30e-22!71;UBERON:0003075!8.30e-22!71;UBERON:0007284!8.30e-22!71;UBERON:0001049!1.60e-21!52;UBERON:0005068!1.60e-21!52;UBERON:0006241!1.60e-21!52;UBERON:0007135!1.60e-21!52;UBERON:0000073!3.98e-21!75;UBERON:0001016!3.98e-21!75;UBERON:0003056!6.73e-21!49;UBERON:0004121!4.77e-19!102;UBERON:0000924!4.77e-19!102;UBERON:0006601!4.77e-19!102;UBERON:0000955!7.30e-19!50;UBERON:0006238!7.30e-19!50;UBERON:0002616!1.14e-18!49;UBERON:0002020!3.68e-16!34;UBERON:0003080!4.99e-16!40;UBERON:0002780!1.85e-15!39;UBERON:0001890!1.85e-15!39;UBERON:0006240!1.85e-15!39;UBERON:0000153!8.97e-14!94;UBERON:0007811!3.15e-13!86;UBERON:0002791!1.52e-12!29;UBERON:0003528!1.52e-12!29;UBERON:0001893!1.52e-12!29;UBERON:0000956!4.06e-09!21;UBERON:0001869!4.06e-09!21;UBERON:0000203!4.06e-09!21;UBERON:0002619!3.44e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.96e-21,64;UBERON:0003075,4.96e-21,64;UBERON:0007284,4.96e-21,64;UBERON:0010371,1.52e-19,73;UBERON:0002020,5.64e-19,34;UBERON:0003056,1.18e-18,49;UBERON:0000073,1.76e-18,54;UBERON:0004121,2.59e-18,95;UBERON:0000924,2.59e-18,95;UBERON:0006601,2.59e-18,95;UBERON:0001049,3.95e-17,52;UBERON:0005068,3.95e-17,52;UBERON:0006241,3.95e-17,52;UBERON:0007135,3.95e-17,52;UBERON:0001017,1.08e-16,73;UBERON:0001016,6.23e-16,75;UBERON:0003528,2.32e-13,29;UBERON:0002791,2.32e-13,29;UBERON:0001893,2.32e-13,29;UBERON:0003080,2.32e-13,40;UBERON:0010314,5.98e-13,92;UBERON:0002780,1.46e-12,39;UBERON:0001890,1.46e-12,39;UBERON:0006240,1.46e-12,39;UBERON:0002616,1.35e-11,46;UBERON:0000955,3.46e-11,47;UBERON:0006238,3.46e-11,47;UBERON:0002240,1.40e-08,6;UBERON:0005174,1.40e-08,6;UBERON:0001137,1.40e-08,6;UBERON:0001948,7.88e-08,5;UBERON:0002315,7.88e-08,5;UBERON:0002420,9.77e-08,8;UBERON:0007245,9.77e-08,8;UBERON:0010009,9.77e-08,8;UBERON:0010011,9.77e-08,8;UBERON:0000454,9.77e-08,8;UBERON:0000020,1.20e-07,12;UBERON:0001032,1.20e-07,12;UBERON:0004456,1.20e-07,12;UBERON:0000956,1.37e-07,21;UBERON:0001869,1.37e-07,21;UBERON:0000203,1.37e-07,21;UBERON:0000033,6.88e-07,13;UBERON:0005085,6.88e-07,13
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,10.3181395038395,8.99284664762456,5.07065122804943,0,0,0,0,0,0.299600110518405,0.384218305321555,2.38486108309499,2.70011876663381,1.68259969081106,5.99867067247988,7.95126747425809,2.69479758272899,4.50473713785711,3.67687514644008,1.10115880999389,1.78762273319263,1.22885226604995,12.924856197559,14.6380229763855,15.106487746146,1.67509799400829,1.12552522006336,1.83357897332172,5.89257170947335,7.83044244395066,9.13357284543973,0.227178579999552,0,0,0,0,0,0,0,0.280888840263504,0,0,0,3.80277233397037,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,1.79748767285787,0,4.14659361972453,0.869121600961382,1.79000820131231,1.24672826735736,0.648965052271031,0.916554274652847,0,0,0.420883711772948,2.08192708740326,1.60931473103431,2.16074555766419,2.71268672104287,3.94611695077702,4.35586648968489,3.46696380870997,0.776110112217047,0.646703978798527,1.13463648100692,1.23165786914764,0.876782929710299,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,4.52780294468852,0,0,0.853153002140936,0.928946687441754,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0,0,0,0,0,0,0,0.685491075658373,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.126473074248515,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.678980343100753,0.234690248288502,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0.315508219416257,0,0.646270193198397,0,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0.642642632843614,0.567760340833074,0.534196811001766,0.81443479676788,0.164970122972535,0,1.21390318077491,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,1.26042765821917,1.55230420539305,0.857348140126369,0.886701168211368,1.07021290561242,0.822745103010605,0.608929898229199,0,0,1.10264199027481,0,0,0,0,0.164140899745061,0,1.48340241608408,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,1.26534397432454,0.406638934253697,0.324016022465404,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,10.1464728963154,0.747582730219894,0.66183396182839,1.16670713006429,0.258319646955462,0,0.234714477291508,0.39061315453185,1.15345278868282,10.8712854371703,12.3852902690882,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,2.82375921308533,0.920650473014354,1.71868654031819,1.3748254587495,2.05524755931193,2.2661816921691,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,1.86817225651518,1.99512436700516,1.53660245178721,0.729320151204882,0.838452650511929,1.2869045591501,1.11123363900808,1.03017528619447,0,1.51618327058278,1.01391719956096,0.188626341386076,1.03005658216871,0.576226371643824,0.746661096422973,0,1.27472758539341,1.15745532278223,0.412085900803307,0.441596760403192,0.342869252385415,1.24233064311536,1.43061713968393,1.16277133305863,0.658765662907314,1.09998990259179,1.09756783723664,1.31534855718921,0.543216455383447,0.561142271657738,2.01679530811096,1.77308068276014,0,0.929621047115796,0.385813221962283,0.999242311751784,0.233931608445408,0.644613162144895,0,0,0.231867835620421
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,10.3181395038395,8.99284664762456,5.07065122804943,0,0,0,0,0,0.299600110518405,0.384218305321555,2.38486108309499,2.70011876663381,1.68259969081106,5.99867067247988,7.95126747425809,2.69479758272899,4.50473713785711,3.67687514644008,1.10115880999389,1.78762273319263,1.22885226604995,12.924856197559,14.6380229763855,15.106487746146,1.67509799400829,1.12552522006336,1.83357897332172,5.89257170947335,7.83044244395066,9.13357284543973,0.227178579999552,0,0,0,0,0,0,0,0.280888840263504,0,0,0,3.80277233397037,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,1.79748767285787,0,4.14659361972453,0.869121600961382,1.79000820131231,1.24672826735736,0.648965052271031,0.916554274652847,0,0,0.420883711772948,2.08192708740326,1.60931473103431,2.16074555766419,2.71268672104287,3.94611695077702,4.35586648968489,3.46696380870997,0.776110112217047,0.646703978798527,1.13463648100692,1.23165786914764,0.876782929710299,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,4.52780294468852,0,0,0.853153002140936,0.928946687441754,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0,0,0,0,0,0,0,0.685491075658373,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.126473074248515,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.678980343100753,0.234690248288502,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0.315508219416257,0,0.646270193198397,0,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0.642642632843614,0.567760340833074,0.534196811001766,0.81443479676788,0.164970122972535,0,1.21390318077491,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,1.26042765821917,1.55230420539305,0.857348140126369,0.886701168211368,1.07021290561242,0.822745103010605,0.608929898229199,0,0,1.10264199027481,0,0,0,0,0.164140899745061,0,1.48340241608408,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,1.26534397432454,0.406638934253697,0.324016022465404,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,10.1464728963154,0.747582730219894,0.66183396182839,1.16670713006429,0.258319646955462,0,0.234714477291508,0.39061315453185,1.15345278868282,10.8712854371703,12.3852902690882,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,2.82375921308533,0.920650473014354,1.71868654031819,1.3748254587495,2.05524755931193,2.2661816921691,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,1.86817225651518,1.99512436700516,1.53660245178721,0.729320151204882,0.838452650511929,1.2869045591501,1.11123363900808,1.03017528619447,0,1.51618327058278,1.01391719956096,0.188626341386076,1.03005658216871,0.576226371643824,0.746661096422973,0,1.27472758539341,1.15745532278223,0.412085900803307,0.441596760403192,0.342869252385415,1.24233064311536,1.43061713968393,1.16277133305863,0.658765662907314,1.09998990259179,1.09756783723664,1.31534855718921,0.543216455383447,0.561142271657738,2.01679530811096,1.77308068276014,0,0.929621047115796,0.385813221962283,0.999242311751784,0.233931608445408,0.644613162144895,0,0,0.231867835620421
|short_description=p5@Rimklb
|short_description=p5@Rimklb
}}
}}

Latest revision as of 14:36, 26 September 2015

Short description:p5@Rimklb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Rimklb_5end
Coexpression cluster:MCL_coexpression_mm9:2275
Association with transcript: 0bp_to_NM_027664, uc009dpg.1_5end
EntrezGene:Rimklb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Rimklb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.32
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.13
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F14.15
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C63.95
eyeball, neonate N01.CNhs11140.1532-43E74.36
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G510.15
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H310.87
testis, neonate N30.CNhs11130.1391-42E212.39
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm4.96e-2164
neural plate4.96e-2164
presumptive neural plate4.96e-2164
ecto-epithelium1.52e-1973
gray matter5.64e-1934
pre-chordal neural plate1.18e-1849
regional part of nervous system1.76e-1854
ectoderm-derived structure2.59e-1895
ectoderm2.59e-1895
presumptive ectoderm2.59e-1895
neural tube3.95e-1752
neural rod3.95e-1752
future spinal cord3.95e-1752
neural keel3.95e-1752
central nervous system1.08e-1673
nervous system6.23e-1675
brain grey matter2.32e-1329
regional part of telencephalon2.32e-1329
telencephalon2.32e-1329
anterior neural tube2.32e-1340
structure with developmental contribution from neural crest5.98e-1392
regional part of forebrain1.46e-1239
forebrain1.46e-1239
future forebrain1.46e-1239
regional part of brain1.35e-1146
brain3.46e-1147
future brain3.46e-1147
spinal cord1.40e-086
dorsal region element1.40e-086
dorsum1.40e-086
regional part of spinal cord7.88e-085
gray matter of spinal cord7.88e-085
basal ganglion9.77e-088
nuclear complex of neuraxis9.77e-088
aggregate regional part of brain9.77e-088
collection of basal ganglia9.77e-088
cerebral subcortex9.77e-088
sense organ1.20e-0712
sensory system1.20e-0712
entire sense organ system1.20e-0712
cerebral cortex1.37e-0721
cerebral hemisphere1.37e-0721
pallium1.37e-0721
head6.88e-0713
ectodermal placode6.88e-0713
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