FFCP PHASE1:Hg19::chr10:48332215..48332243,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000454672_5end | |association_with_transcript=-18bp_to_ENST00000454672_5end | ||
|cluster_id=chr10:48332215..48332243,- | |||
|coexpression_cluster_id=C2061 | |||
|description=CAGE_peak_1_at_ENST00000454672_5end | |description=CAGE_peak_1_at_ENST00000454672_5end | ||
|id=chr10:48332215..48332243,- | |id=chr10:48332215..48332243,- | ||
|ontology_enrichment_celltype=CL:0000066!3.96e-27!254;CL:0002251!2.07e-12!21;CL:0000223!1.43e-11!59;CL:0000076!6.82e-10!62;CL:0002076!1.19e-09!43;CL:0000077!3.84e-07!19 | |ontology_enrichment_celltype=CL:0000066!3.96e-27!254;CL:0002251!2.07e-12!21;CL:0000223!1.43e-11!59;CL:0000076!6.82e-10!62;CL:0002076!1.19e-09!43;CL:0000077!3.84e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;7.32e-14;19!CL:0000076;5.52e-09;63!CL:0000064;7.78e-09;3!CL:0000067;7.78e-09;3!CL:0005012;7.78e-09;3!CL:0002304;7.78e-09;3!CL:0002379;1.92e-07;1!CL:0002251;3.54e-07;20!CL:0000342;3.71e-07;1!CL:0002565;3.71e-07;1!CL:0000319;7.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,2.98e-17,63;CL:0000077,6.97e-14,19;CL:0000066,3.88e-11,253;CL:0000064,7.78e-09,3;CL:0000067,7.78e-09,3;CL:0005012,7.78e-09,3;CL:0002304,7.78e-09,3;CL:0002379,1.86e-07,1;CL:0000342,3.01e-07,1;CL:0002565,3.01e-07,1;CL:0002251,4.00e-07,20;CL:0000319,9.73e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.12e-35!106;DOID:0050687!7.76e-31!143;DOID:162!2.07e-25!235;DOID:14566!1.85e-24!239;DOID:1749!3.80e-19!14;DOID:299!1.70e-11!25;DOID:7!1.10e-09!39 | |ontology_enrichment_disease=DOID:305!3.12e-35!106;DOID:0050687!7.76e-31!143;DOID:162!2.07e-25!235;DOID:14566!1.85e-24!239;DOID:1749!3.80e-19!14;DOID:299!1.70e-11!25;DOID:7!1.10e-09!39 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.18e-25;14!DOID:3620;1.92e-07;1!DOID:3565;1.92e-07;1!DOID:3030;7.72e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.19e-25,14;DOID:162,3.05e-12,235;DOID:305,5.47e-12,106;DOID:14566,7.11e-12,239;DOID:0050687,1.77e-10,143;DOID:3620,1.86e-07,1;DOID:3565,1.86e-07,1;DOID:3030,9.73e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.87e-12!169;UBERON:0000925!7.87e-12!169;UBERON:0006595!7.87e-12!169;UBERON:0000344!1.61e-11!12;UBERON:0001007!1.70e-11!155;UBERON:0001555!1.70e-11!155;UBERON:0007026!1.70e-11!155;UBERON:0000077!1.26e-10!130;UBERON:0003729!1.43e-10!5;UBERON:0004921!1.51e-10!129;UBERON:0004185!1.51e-10!129;UBERON:0001041!2.66e-09!98;UBERON:0003343!2.84e-09!4;UBERON:0004785!2.84e-09!4;UBERON:0001264!4.28e-09!10;UBERON:0003922!4.28e-09!10;UBERON:0003923!4.28e-09!10;UBERON:0003924!4.28e-09!10;UBERON:0003921!4.28e-09!10;UBERON:0002108!5.59e-09!14;UBERON:0002114!1.25e-08!12;UBERON:0000488!1.84e-08!4;UBERON:0001045!3.79e-08!11;UBERON:0002394!2.21e-07!4;UBERON:0003928!2.21e-07!4;UBERON:0000160!3.02e-07!27;UBERON:0005409!5.70e-07!35;UBERON:0000466!8.00e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;5.81e-24;4!UBERON:0004785;5.81e-24;4!UBERON:0000974;4.86e-16;6!UBERON:0000488;7.76e-14;4!UBERON:0001264;1.49e-09;10!UBERON:0002203;2.19e-09;6!UBERON:0001768;2.19e-09;6!UBERON:0002200;2.19e-09;6!UBERON:0001778;7.78e-09;3!UBERON:0001775;7.78e-09;3!UBERON:0007625;8.12e-09;11!UBERON:0003729;1.87e-07;13!UBERON:0002506;3.71e-07;1!UBERON:0001769;3.71e-07;1!UBERON:0001801;6.13e-07;14!UBERON:0000997;7.72e-07;1!UBERON:0005056;7.72e-07;1!UBERON:0004176;7.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,7.15e-24,4;UBERON:0004785,7.15e-24,4;UBERON:0000488,6.68e-14,4;UBERON:0000974,1.23e-09,10;UBERON:0001264,1.29e-09,10;UBERON:0002203,1.99e-09,6;UBERON:0001768,1.99e-09,6;UBERON:0002200,1.99e-09,6;UBERON:0007625,7.57e-09,11;UBERON:0001778,7.78e-09,3;UBERON:0001775,7.78e-09,3;UBERON:0003729,1.99e-07,13;UBERON:0002506,3.01e-07,1;UBERON:0001769,3.01e-07,1;UBERON:0001801,5.81e-07,14;UBERON:0000997,6.88e-07,1;UBERON:0005056,6.88e-07,1 | |||
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| ||
|short_description=p1@ENST00000454672 | |short_description=p1@ENST00000454672 | ||
}} | }} |
Latest revision as of 13:53, 23 July 2015
Short description: | p1@ENST00000454672 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000454672_5end |
Coexpression cluster: | C2061_oral_ductal_choriocarcinoma_acantholytic_epidermoid_Lens_pharyngeal |
Association with transcript: | -18bp_to_ENST00000454672_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 2.98e-17 | 63 |
mesothelial cell | 6.97e-14 | 19 |
epithelial cell | 3.88e-11 | 253 |
ciliated cell | 7.78e-09 | 3 |
ciliated epithelial cell | 7.78e-09 | 3 |
multi-ciliated epithelial cell | 7.78e-09 | 3 |
non-pigmented ciliary epithelial cell | 7.78e-09 | 3 |
meningothelial cell | 1.86e-07 | 1 |
pigment cell (sensu Vertebrata) | 3.01e-07 | 1 |
iris pigment epithelial cell | 3.01e-07 | 1 |
epithelial cell of alimentary canal | 4.00e-07 | 20 |
mucus secreting cell | 9.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 7.15e-24 | 4 |
respiratory system mucosa | 7.15e-24 | 4 |
atypical epithelium | 6.68e-14 | 4 |
neck | 1.23e-09 | 10 |
pancreas | 1.29e-09 | 10 |
vasculature of eye | 1.99e-09 | 6 |
uvea | 1.99e-09 | 6 |
vasculature of head | 1.99e-09 | 6 |
pigment epithelium of eye | 7.57e-09 | 11 |
ciliary epithelium | 7.78e-09 | 3 |
ciliary body | 7.78e-09 | 3 |
mouth mucosa | 1.99e-07 | 13 |
iris epithelium | 3.01e-07 | 1 |
iris | 3.01e-07 | 1 |
anterior segment of eyeball | 5.81e-07 | 14 |
mammalian vulva | 6.88e-07 | 1 |
external female genitalia | 6.88e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.19e-25 | 14 |
cancer | 3.05e-12 | 235 |
carcinoma | 5.47e-12 | 106 |
disease of cellular proliferation | 7.11e-12 | 239 |
cell type cancer | 1.77e-10 | 143 |
central nervous system cancer | 1.86e-07 | 1 |
meningioma | 1.86e-07 | 1 |
mucinous adenocarcinoma | 9.73e-07 | 1 |