FFCP PHASE1:Hg19::chr14:35872453..35872485,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4792 | |EntrezGene=4792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7797 | |HGNC=7797 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000555371_5end | |association_with_transcript=-9bp_to_ENST00000555371_5end | ||
|cluster_id=chr14:35872453..35872485,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_NFKBIA_5end | |description=CAGE_peak_2_at_NFKBIA_5end | ||
|id=chr14:35872453..35872485,- | |id=chr14:35872453..35872485,- | ||
|ontology_enrichment_celltype=CL:0000738!3.00e-32!140;CL:0000766!9.18e-26!76;CL:0002057!1.22e-25!42;CL:0000860!2.50e-23!45;CL:0002031!8.89e-23!124;CL:0002087!1.54e-22!119;CL:0000557!4.00e-21!71;CL:0002009!5.49e-20!65;CL:0000839!2.53e-19!70;CL:0002194!6.54e-19!63;CL:0000576!6.54e-19!63;CL:0000040!6.54e-19!63;CL:0000559!6.54e-19!63;CL:0000037!1.23e-17!172;CL:0000566!1.23e-17!172;CL:0000988!6.60e-17!182;CL:0002032!1.45e-15!165;CL:0000837!1.45e-15!165;CL:0000763!2.42e-11!112;CL:0000049!2.42e-11!112 | |ontology_enrichment_celltype=CL:0000738!3.00e-32!140;CL:0000766!9.18e-26!76;CL:0002057!1.22e-25!42;CL:0000860!2.50e-23!45;CL:0002031!8.89e-23!124;CL:0002087!1.54e-22!119;CL:0000557!4.00e-21!71;CL:0002009!5.49e-20!65;CL:0000839!2.53e-19!70;CL:0002194!6.54e-19!63;CL:0000576!6.54e-19!63;CL:0000040!6.54e-19!63;CL:0000559!6.54e-19!63;CL:0000037!1.23e-17!172;CL:0000566!1.23e-17!172;CL:0000988!6.60e-17!182;CL:0002032!1.45e-15!165;CL:0000837!1.45e-15!165;CL:0000763!2.42e-11!112;CL:0000049!2.42e-11!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.22e-21;33!CL:0002057;2.22e-21;33!CL:0000473;1.60e-18;39!CL:0000234;1.60e-18;39!CL:0000576;1.64e-15;48!CL:0000766;1.32e-14;69!CL:0002087;4.98e-10;104!CL:0000738;5.01e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.68e-37,136;CL:0000766,2.64e-30,72;CL:0000473,2.65e-28,48;CL:0000234,2.65e-28,48;CL:0000860,3.23e-27,42;CL:0002057,3.23e-27,42;CL:0002031,1.47e-26,120;CL:0002087,4.02e-26,115;CL:0000557,2.12e-25,67;CL:0002009,6.04e-24,61;CL:0000839,2.69e-23,66;CL:0002194,9.49e-23,59;CL:0000576,9.49e-23,59;CL:0000040,9.49e-23,59;CL:0000559,9.49e-23,59;CL:0000037,2.75e-21,168;CL:0000988,6.36e-21,177;CL:0002032,6.03e-19,161;CL:0000837,6.03e-19,161;CL:0000763,2.81e-14,108;CL:0000049,2.81e-14,108;CL:0000134,3.11e-08,354;CL:0002320,2.06e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.67e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.30e-21!102;UBERON:0003061!4.30e-21!102;UBERON:0002193!2.01e-20!112;UBERON:0002371!8.48e-19!80;UBERON:0002405!1.60e-15!115;UBERON:0001474!1.98e-15!86;UBERON:0004765!3.05e-12!101;UBERON:0001434!3.05e-12!101;UBERON:0003081!3.17e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.96e-25,98;UBERON:0003061,1.96e-25,98;UBERON:0002193,3.14e-24,108;UBERON:0002371,6.19e-23,76;UBERON:0002405,1.66e-21,93;UBERON:0001474,1.41e-19,82;UBERON:0004765,3.46e-17,90;UBERON:0001434,7.31e-15,100;UBERON:0003081,2.06e-13,203;UBERON:0000926,3.08e-09,315;UBERON:0004120,3.08e-09,315;UBERON:0006603,3.08e-09,315 | |||
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| ||
|short_description=p2@NFKBIA | |short_description=p2@NFKBIA | ||
}} | }} |
Latest revision as of 21:02, 19 September 2015
Short description: | p2@NFKBIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NFKBIA_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -9bp_to_ENST00000555371_5end |
EntrezGene: | NFKBIA |
HGNC: | 7797 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.68e-37 | 136 |
myeloid leukocyte | 2.64e-30 | 72 |
defensive cell | 2.65e-28 | 48 |
phagocyte | 2.65e-28 | 48 |
classical monocyte | 3.23e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.23e-27 | 42 |
hematopoietic lineage restricted progenitor cell | 1.47e-26 | 120 |
nongranular leukocyte | 4.02e-26 | 115 |
granulocyte monocyte progenitor cell | 2.12e-25 | 67 |
macrophage dendritic cell progenitor | 6.04e-24 | 61 |
myeloid lineage restricted progenitor cell | 2.69e-23 | 66 |
monopoietic cell | 9.49e-23 | 59 |
monocyte | 9.49e-23 | 59 |
monoblast | 9.49e-23 | 59 |
promonocyte | 9.49e-23 | 59 |
hematopoietic stem cell | 2.75e-21 | 168 |
hematopoietic cell | 6.36e-21 | 177 |
hematopoietic oligopotent progenitor cell | 6.03e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.03e-19 | 161 |
myeloid cell | 2.81e-14 | 108 |
common myeloid progenitor | 2.81e-14 | 108 |
mesenchymal cell | 3.11e-08 | 354 |
connective tissue cell | 2.06e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.96e-25 | 98 |
blood island | 1.96e-25 | 98 |
hemolymphoid system | 3.14e-24 | 108 |
bone marrow | 6.19e-23 | 76 |
immune system | 1.66e-21 | 93 |
bone element | 1.41e-19 | 82 |
skeletal element | 3.46e-17 | 90 |
skeletal system | 7.31e-15 | 100 |
lateral plate mesoderm | 2.06e-13 | 203 |
mesoderm | 3.08e-09 | 315 |
mesoderm-derived structure | 3.08e-09 | 315 |
presumptive mesoderm | 3.08e-09 | 315 |