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FFCP PHASE1:Mm9::chr5:71233531..71233577,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14405
|EntrezGene=14405
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=Q8BHM6,E9QL38
|UniProt=Q8BHM6,E9QL38
|association_with_transcript=278bp_to_ENSMUST00000031119,ENSMUST00000101143,NM_010252,uc008xqr.1,uc008xqs.1,uc008xqt.1_5end
|association_with_transcript=278bp_to_ENSMUST00000031119,ENSMUST00000101143,NM_010252,uc008xqr.1,uc008xqs.1,uc008xqt.1_5end
|cluster_id=chr5:71233531..71233577,-
|description=CAGE_peak_1_at_Gabrg1_5end
|description=CAGE_peak_1_at_Gabrg1_5end
|id=chr5:71233531..71233577,-
|id=chr5:71233531..71233577,-
|ontology_enrichment_celltype=CL:0000117!8.13e-12!23;CL:0000337!8.13e-12!23;CL:0000540!1.54e-07!33;CL:0000047!1.54e-07!33;CL:0000031!1.54e-07!33;CL:0000404!1.54e-07!33
|ontology_enrichment_celltype=CL:0000117!8.13e-12!23;CL:0000337!8.13e-12!23;CL:0000540!1.54e-07!33;CL:0000047!1.54e-07!33;CL:0000031!1.54e-07!33;CL:0000404!1.54e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.49e-14,23;CL:0000337,1.49e-14,23;CL:0000540,2.46e-08,33;CL:0000047,2.46e-08,33;CL:0000031,2.46e-08,33;CL:0000404,2.46e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.37e-20!52;UBERON:0005068!1.37e-20!52;UBERON:0006241!1.37e-20!52;UBERON:0007135!1.37e-20!52;UBERON:0000073!1.15e-19!75;UBERON:0001016!1.15e-19!75;UBERON:0001017!2.24e-19!73;UBERON:0005743!2.24e-19!73;UBERON:0000955!6.31e-19!50;UBERON:0006238!6.31e-19!50;UBERON:0002616!3.59e-18!49;UBERON:0002346!2.17e-17!71;UBERON:0003075!2.17e-17!71;UBERON:0007284!2.17e-17!71;UBERON:0000033!3.96e-17!63;UBERON:0002020!6.82e-16!34;UBERON:0003056!3.56e-15!49;UBERON:0003080!1.62e-14!40;UBERON:0002780!1.03e-13!39;UBERON:0001890!1.03e-13!39;UBERON:0006240!1.03e-13!39;UBERON:0004121!2.07e-13!102;UBERON:0000924!2.07e-13!102;UBERON:0006601!2.07e-13!102;UBERON:0002791!4.44e-12!29;UBERON:0003528!4.44e-12!29;UBERON:0001893!4.44e-12!29;UBERON:0007811!1.51e-08!86;UBERON:0002420!2.41e-07!8;UBERON:0007245!2.41e-07!8;UBERON:0010009!2.41e-07!8;UBERON:0010011!2.41e-07!8;UBERON:0000454!2.41e-07!8;UBERON:0002619!2.50e-07!17;UBERON:0002021!4.15e-07!10;UBERON:0000411!4.15e-07!10;UBERON:0001950!4.15e-07!10;UBERON:0003076!6.80e-07!12;UBERON:0003057!6.80e-07!12;UBERON:0000956!9.25e-07!21;UBERON:0001869!9.25e-07!21;UBERON:0000203!9.25e-07!21
|ontology_enrichment_uberon=UBERON:0001049!1.37e-20!52;UBERON:0005068!1.37e-20!52;UBERON:0006241!1.37e-20!52;UBERON:0007135!1.37e-20!52;UBERON:0000073!1.15e-19!75;UBERON:0001016!1.15e-19!75;UBERON:0001017!2.24e-19!73;UBERON:0005743!2.24e-19!73;UBERON:0000955!6.31e-19!50;UBERON:0006238!6.31e-19!50;UBERON:0002616!3.59e-18!49;UBERON:0002346!2.17e-17!71;UBERON:0003075!2.17e-17!71;UBERON:0007284!2.17e-17!71;UBERON:0000033!3.96e-17!63;UBERON:0002020!6.82e-16!34;UBERON:0003056!3.56e-15!49;UBERON:0003080!1.62e-14!40;UBERON:0002780!1.03e-13!39;UBERON:0001890!1.03e-13!39;UBERON:0006240!1.03e-13!39;UBERON:0004121!2.07e-13!102;UBERON:0000924!2.07e-13!102;UBERON:0006601!2.07e-13!102;UBERON:0002791!4.44e-12!29;UBERON:0003528!4.44e-12!29;UBERON:0001893!4.44e-12!29;UBERON:0007811!1.51e-08!86;UBERON:0002420!2.41e-07!8;UBERON:0007245!2.41e-07!8;UBERON:0010009!2.41e-07!8;UBERON:0010011!2.41e-07!8;UBERON:0000454!2.41e-07!8;UBERON:0002619!2.50e-07!17;UBERON:0002021!4.15e-07!10;UBERON:0000411!4.15e-07!10;UBERON:0001950!4.15e-07!10;UBERON:0003076!6.80e-07!12;UBERON:0003057!6.80e-07!12;UBERON:0000956!9.25e-07!21;UBERON:0001869!9.25e-07!21;UBERON:0000203!9.25e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.58e-24,54;UBERON:0001049,1.81e-22,52;UBERON:0005068,1.81e-22,52;UBERON:0006241,1.81e-22,52;UBERON:0007135,1.81e-22,52;UBERON:0001017,1.47e-20,73;UBERON:0002020,9.50e-20,34;UBERON:0001016,1.26e-19,75;UBERON:0002346,5.76e-19,64;UBERON:0003075,5.76e-19,64;UBERON:0007284,5.76e-19,64;UBERON:0000955,2.64e-17,47;UBERON:0006238,2.64e-17,47;UBERON:0002616,2.28e-16,46;UBERON:0010371,4.75e-15,73;UBERON:0004121,7.48e-15,95;UBERON:0000924,7.48e-15,95;UBERON:0006601,7.48e-15,95;UBERON:0003528,1.65e-14,29;UBERON:0002791,1.65e-14,29;UBERON:0001893,1.65e-14,29;UBERON:0003080,5.40e-14,40;UBERON:0002780,5.36e-13,39;UBERON:0001890,5.36e-13,39;UBERON:0006240,5.36e-13,39;UBERON:0003056,1.54e-12,49;UBERON:0002420,8.84e-10,8;UBERON:0007245,8.84e-10,8;UBERON:0010009,8.84e-10,8;UBERON:0010011,8.84e-10,8;UBERON:0000454,8.84e-10,8;UBERON:0003076,9.91e-10,12;UBERON:0003057,9.91e-10,12;UBERON:0010314,1.84e-09,92;UBERON:0002240,2.54e-08,6;UBERON:0005174,2.54e-08,6;UBERON:0001137,2.54e-08,6;UBERON:0002619,2.67e-08,17;UBERON:0002021,3.82e-08,10;UBERON:0000411,3.82e-08,10;UBERON:0001950,3.82e-08,10;UBERON:0000956,2.37e-07,21;UBERON:0001869,2.37e-07,21;UBERON:0000203,2.37e-07,21;UBERON:0001948,4.30e-07,5;UBERON:0002315,4.30e-07,5
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03474691289397,3.1739458756322,1.90149421051854,0,0,0,0,0,0.599200221036809,0,0,0.270011876663381,0,15.996455126613,19.8781686856452,1.10241719293459,0.287536413054709,1.83843757322004,22.0231761998777,17.7485399938411,21.8121277223866,3.29715719325485,4.02545631850602,5.73004707612436,11.1673199600552,36.0168070420275,29.3372635731475,25.3380583507354,27.9048494366242,9.31997229126503,0.075726193333184,0.377857800533928,0,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,3.51336956413857,4.60782754989601,0.255457055208591,0,0,0,35.9497534571574,24.2475319493872,18.7224984648168,12.1677024134594,9.97290283588289,35.1161795305657,30.0146336675352,2.85150218780886,0.248813941220186,0,1.05220927943237,0.130120442962704,0,0,0.30140963567143,0.884474488967262,2.3060469651273,0.843315521037559,2.58703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41159794256509,5.35103984372279,0,0,0.639864751605702,0.232236671860439,0.257734922644187,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,1.1270773567308,0.203651327845314,0.387904974335251,0.98190147846446,0.948548056863859,0.590440591918409,0.784993639206874,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,27.4541508879124,25.9037827368769,0,0,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0,0,13.8168166061377,0.141940085208269,0.534196811001766,0.325773918707152,0.164970122972535,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,6.12791290356818,0.36012218806262,0.129358683782755,0,0,0.713475270408282,0.822745103010605,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,30.4097495297236,0,0.412773735926445,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.747582730219894,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,1.17183946359555,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,6.44455331110048,6.30185064783336,3.60891682921744,2.05524755931193,4.5323633843382,6.75022500231806,4.95353323546643,4.07828168085784,0.51776031175182,0.31136204275253,0,0.682934423016537,1.70174701947806,1.25767897576789,0.551530525350042,4.4449345560323,3.09052585858341,2.88827288632634,3.28506375292937,2.5347929989024,3.58390048633545,3.65201879132541,3.13723246783859,2.92920891673628,3.33405583898152,1.97003354106254,2.50781986602817,1.23625770240992,3.23837624295674,3.77156177623957,2.30718548007139,2.38436189947321,2.90692833264657,2.25862512996793,2.19997980518359,2.56099162021882,2.89376682581627,2.71608227691724,3.92799590160417,2.72860541685601,2.75812550651578,3.6830793885272,4.33823155320705,2.70069255373598,4.24677982494508,3.27504251823572,1.93383948643468,1.91288332068843,1.54413993383661,1.15933917810211
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03474691289397,3.1739458756322,1.90149421051854,0,0,0,0,0,0.599200221036809,0,0,0.270011876663381,0,15.996455126613,19.8781686856452,1.10241719293459,0.287536413054709,1.83843757322004,22.0231761998777,17.7485399938411,21.8121277223866,3.29715719325485,4.02545631850602,5.73004707612436,11.1673199600552,36.0168070420275,29.3372635731475,25.3380583507354,27.9048494366242,9.31997229126503,0.075726193333184,0.377857800533928,0,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,3.51336956413857,4.60782754989601,0.255457055208591,0,0,0,35.9497534571574,24.2475319493872,18.7224984648168,12.1677024134594,9.97290283588289,35.1161795305657,30.0146336675352,2.85150218780886,0.248813941220186,0,1.05220927943237,0.130120442962704,0,0,0.30140963567143,0.884474488967262,2.3060469651273,0.843315521037559,2.58703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41159794256509,5.35103984372279,0,0,0.639864751605702,0.232236671860439,0.257734922644187,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,1.1270773567308,0.203651327845314,0.387904974335251,0.98190147846446,0.948548056863859,0.590440591918409,0.784993639206874,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,27.4541508879124,25.9037827368769,0,0,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0,0,13.8168166061377,0.141940085208269,0.534196811001766,0.325773918707152,0.164970122972535,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,6.12791290356818,0.36012218806262,0.129358683782755,0,0,0.713475270408282,0.822745103010605,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,30.4097495297236,0,0.412773735926445,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.747582730219894,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,1.17183946359555,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,6.44455331110048,6.30185064783336,3.60891682921744,2.05524755931193,4.5323633843382,6.75022500231806,4.95353323546643,4.07828168085784,0.51776031175182,0.31136204275253,0,0.682934423016537,1.70174701947806,1.25767897576789,0.551530525350042,4.4449345560323,3.09052585858341,2.88827288632634,3.28506375292937,2.5347929989024,3.58390048633545,3.65201879132541,3.13723246783859,2.92920891673628,3.33405583898152,1.97003354106254,2.50781986602817,1.23625770240992,3.23837624295674,3.77156177623957,2.30718548007139,2.38436189947321,2.90692833264657,2.25862512996793,2.19997980518359,2.56099162021882,2.89376682581627,2.71608227691724,3.92799590160417,2.72860541685601,2.75812550651578,3.6830793885272,4.33823155320705,2.70069255373598,4.24677982494508,3.27504251823572,1.93383948643468,1.91288332068843,1.54413993383661,1.15933917810211
|short_description=p1@Gabrg1
|short_description=p1@Gabrg1
}}
}}

Latest revision as of 04:39, 26 September 2015

Short description:p1@Gabrg1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gabrg1_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 278bp_to_ENSMUST00000031119, ENSMUST00000101143, NM_010252, uc008xqr.1, uc008xqs.1, uc008xqt.1_5end
EntrezGene:Gabrg1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gabrg1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D519.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E536.02
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I629.34
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.34
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.90
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.32
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A435.95
corpus striatum, adult.CNhs10487.19-21D824.25
corpus striatum, neonate N00.CNhs11226.630-43F118.72
cortex, adult.CNhs10473.12-14D512.17
cortex, neonate N30.CNhs11107.1392-42F29.97
diencephalon, adult.CNhs10482.20-12F235.12
diencephalon, neonate N30.CNhs11201.1388-42B230.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E88.41
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C227.45
medulla oblongata, neonate N30.CNhs11200.1396-42A325.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I913.82
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C930.41
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.49e-1423
neuroblast (sensu Vertebrata)1.49e-1423
neuron2.46e-0833
neuronal stem cell2.46e-0833
neuroblast2.46e-0833
electrically signaling cell2.46e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.58e-2454
neural tube1.81e-2252
neural rod1.81e-2252
future spinal cord1.81e-2252
neural keel1.81e-2252
central nervous system1.47e-2073
gray matter9.50e-2034
nervous system1.26e-1975
neurectoderm5.76e-1964
neural plate5.76e-1964
presumptive neural plate5.76e-1964
brain2.64e-1747
future brain2.64e-1747
regional part of brain2.28e-1646
ecto-epithelium4.75e-1573
ectoderm-derived structure7.48e-1595
ectoderm7.48e-1595
presumptive ectoderm7.48e-1595
brain grey matter1.65e-1429
regional part of telencephalon1.65e-1429
telencephalon1.65e-1429
anterior neural tube5.40e-1440
regional part of forebrain5.36e-1339
forebrain5.36e-1339
future forebrain5.36e-1339
pre-chordal neural plate1.54e-1249
basal ganglion8.84e-108
nuclear complex of neuraxis8.84e-108
aggregate regional part of brain8.84e-108
collection of basal ganglia8.84e-108
cerebral subcortex8.84e-108
posterior neural tube9.91e-1012
chordal neural plate9.91e-1012
structure with developmental contribution from neural crest1.84e-0992
spinal cord2.54e-086
dorsal region element2.54e-086
dorsum2.54e-086
regional part of cerebral cortex2.67e-0817
occipital lobe3.82e-0810
visual cortex3.82e-0810
neocortex3.82e-0810
cerebral cortex2.37e-0721
cerebral hemisphere2.37e-0721
pallium2.37e-0721
regional part of spinal cord4.30e-075
gray matter of spinal cord4.30e-075
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