FFCP PHASE1:Hg19::chr10:26097547..26097552,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:26097547..26097552,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_at_chr10:26097547..26097552,+ | |description=CAGE_peak_at_chr10:26097547..26097552,+ | ||
|id=chr10:26097547..26097552,+ | |id=chr10:26097547..26097552,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.52e-50;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.12e-53!57;UBERON:0005068!5.12e-53!57;UBERON:0006241!5.12e-53!57;UBERON:0007135!5.12e-53!57;UBERON:0002616!3.58e-51!59;UBERON:0002780!1.47e-44!41;UBERON:0001890!1.47e-44!41;UBERON:0006240!1.47e-44!41;UBERON:0003080!1.78e-43!42;UBERON:0000955!6.98e-43!69;UBERON:0006238!6.98e-43!69;UBERON:0001869!9.70e-42!32;UBERON:0001893!2.93e-39!34;UBERON:0002020!3.03e-39!34;UBERON:0003528!3.03e-39!34;UBERON:0001017!7.06e-36!82;UBERON:0003075!1.48e-34!86;UBERON:0007284!1.48e-34!86;UBERON:0005743!3.88e-34!86;UBERON:0002791!6.08e-34!33;UBERON:0002346!6.23e-33!90;UBERON:0000073!9.59e-31!94;UBERON:0001016!9.59e-31!94;UBERON:0003056!1.55e-29!61;UBERON:0007023!1.02e-28!115;UBERON:0002420!2.03e-28!9;UBERON:0007245!2.03e-28!9;UBERON:0010009!2.03e-28!9;UBERON:0010011!2.03e-28!9;UBERON:0000454!2.03e-28!9;UBERON:0002308!3.37e-28!9;UBERON:0000125!3.37e-28!9;UBERON:0000033!3.20e-26!123;UBERON:0000153!6.64e-25!129;UBERON:0007811!6.64e-25!129;UBERON:0000369!6.91e-24!4;UBERON:0002435!6.91e-24!4;UBERON:0000204!6.91e-24!4;UBERON:0010082!6.91e-24!4;UBERON:0009663!1.06e-23!7;UBERON:0001950!2.13e-22!20;UBERON:0002619!2.13e-20!22;UBERON:0001872!1.39e-18!5;UBERON:0000956!5.65e-18!25;UBERON:0000203!5.65e-18!25;UBERON:0004121!3.09e-16!169;UBERON:0000924!8.29e-16!173;UBERON:0006601!8.29e-16!173;UBERON:0005383!7.64e-15!3;UBERON:0005382!7.64e-15!3;UBERON:0000988!4.14e-14!3;UBERON:0000025!5.19e-14!194;UBERON:0004733!2.60e-13!12;UBERON:0002028!2.60e-13!12;UBERON:0007277!2.60e-13!12;UBERON:0004732!2.63e-12!13;UBERON:0001874!8.62e-12!1;UBERON:0001882!1.18e-11!1;UBERON:0005403!1.18e-11!1;UBERON:0002298!1.34e-11!8;UBERON:0002581!1.78e-11!1;UBERON:0003112!1.97e-11!1;UBERON:0000032!1.97e-11!1;UBERON:0005253!1.97e-11!1;UBERON:0003128!1.97e-11!1;UBERON:0002241!1.97e-11!1;UBERON:0001703!1.97e-11!1;UBERON:0004761!1.97e-11!1;UBERON:0009617!1.97e-11!1;UBERON:0007190!2.42e-11!1;UBERON:0000477!2.95e-11!286;UBERON:0002902!3.63e-11!1;UBERON:0009899!3.63e-11!1;UBERON:0002022!6.00e-11!1;UBERON:0004111!9.07e-11!241;UBERON:0003076!1.07e-10!15;UBERON:0003057!1.07e-10!15;UBERON:0002680!1.92e-10!9;UBERON:0001895!1.92e-10!9;UBERON:0010092!1.92e-10!9;UBERON:0000349!3.39e-09!5;UBERON:0000064!3.81e-09!219;UBERON:0000475!3.51e-08!365;UBERON:0000483!8.49e-08!309;UBERON:0000119!1.07e-07!312;UBERON:0000200!1.25e-07!6;UBERON:0001894!9.38e-07!7;UBERON:0006222!9.38e-07!7 | |ontology_enrichment_uberon=UBERON:0001049!5.12e-53!57;UBERON:0005068!5.12e-53!57;UBERON:0006241!5.12e-53!57;UBERON:0007135!5.12e-53!57;UBERON:0002616!3.58e-51!59;UBERON:0002780!1.47e-44!41;UBERON:0001890!1.47e-44!41;UBERON:0006240!1.47e-44!41;UBERON:0003080!1.78e-43!42;UBERON:0000955!6.98e-43!69;UBERON:0006238!6.98e-43!69;UBERON:0001869!9.70e-42!32;UBERON:0001893!2.93e-39!34;UBERON:0002020!3.03e-39!34;UBERON:0003528!3.03e-39!34;UBERON:0001017!7.06e-36!82;UBERON:0003075!1.48e-34!86;UBERON:0007284!1.48e-34!86;UBERON:0005743!3.88e-34!86;UBERON:0002791!6.08e-34!33;UBERON:0002346!6.23e-33!90;UBERON:0000073!9.59e-31!94;UBERON:0001016!9.59e-31!94;UBERON:0003056!1.55e-29!61;UBERON:0007023!1.02e-28!115;UBERON:0002420!2.03e-28!9;UBERON:0007245!2.03e-28!9;UBERON:0010009!2.03e-28!9;UBERON:0010011!2.03e-28!9;UBERON:0000454!2.03e-28!9;UBERON:0002308!3.37e-28!9;UBERON:0000125!3.37e-28!9;UBERON:0000033!3.20e-26!123;UBERON:0000153!6.64e-25!129;UBERON:0007811!6.64e-25!129;UBERON:0000369!6.91e-24!4;UBERON:0002435!6.91e-24!4;UBERON:0000204!6.91e-24!4;UBERON:0010082!6.91e-24!4;UBERON:0009663!1.06e-23!7;UBERON:0001950!2.13e-22!20;UBERON:0002619!2.13e-20!22;UBERON:0001872!1.39e-18!5;UBERON:0000956!5.65e-18!25;UBERON:0000203!5.65e-18!25;UBERON:0004121!3.09e-16!169;UBERON:0000924!8.29e-16!173;UBERON:0006601!8.29e-16!173;UBERON:0005383!7.64e-15!3;UBERON:0005382!7.64e-15!3;UBERON:0000988!4.14e-14!3;UBERON:0000025!5.19e-14!194;UBERON:0004733!2.60e-13!12;UBERON:0002028!2.60e-13!12;UBERON:0007277!2.60e-13!12;UBERON:0004732!2.63e-12!13;UBERON:0001874!8.62e-12!1;UBERON:0001882!1.18e-11!1;UBERON:0005403!1.18e-11!1;UBERON:0002298!1.34e-11!8;UBERON:0002581!1.78e-11!1;UBERON:0003112!1.97e-11!1;UBERON:0000032!1.97e-11!1;UBERON:0005253!1.97e-11!1;UBERON:0003128!1.97e-11!1;UBERON:0002241!1.97e-11!1;UBERON:0001703!1.97e-11!1;UBERON:0004761!1.97e-11!1;UBERON:0009617!1.97e-11!1;UBERON:0007190!2.42e-11!1;UBERON:0000477!2.95e-11!286;UBERON:0002902!3.63e-11!1;UBERON:0009899!3.63e-11!1;UBERON:0002022!6.00e-11!1;UBERON:0004111!9.07e-11!241;UBERON:0003076!1.07e-10!15;UBERON:0003057!1.07e-10!15;UBERON:0002680!1.92e-10!9;UBERON:0001895!1.92e-10!9;UBERON:0010092!1.92e-10!9;UBERON:0000349!3.39e-09!5;UBERON:0000064!3.81e-09!219;UBERON:0000475!3.51e-08!365;UBERON:0000483!8.49e-08!309;UBERON:0000119!1.07e-07!312;UBERON:0000200!1.25e-07!6;UBERON:0001894!9.38e-07!7;UBERON:0006222!9.38e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0005383;8.98e-131;3!UBERON:0005382;8.98e-131;3!UBERON:0001874;9.37e-99;1!UBERON:0000369;1.55e-98;4!UBERON:0002435;1.55e-98;4!UBERON:0000204;1.55e-98;4!UBERON:0009663;4.76e-57;7!UBERON:0001873;4.52e-50;2!UBERON:0002420;9.75e-45;9!UBERON:0000125;9.75e-45;9!UBERON:0007245;9.75e-45;9!UBERON:0002308;9.75e-45;9!UBERON:0010009;9.75e-45;9!UBERON:0010011;9.75e-45;9!UBERON:0000454;9.75e-45;9!UBERON:0002791;1.83e-13;32!UBERON:0003528;1.70e-11;34!UBERON:0002020;1.70e-11;34!UBERON:0001893;1.70e-11;34!UBERON:0001869;1.71e-11;32!UBERON:0000955;1.53e-08;68!UBERON:0002780;1.54e-08;41!UBERON:0001890;1.54e-08;41!UBERON:0000073;8.27e-08;53!UBERON:0002616;8.27e-08;53!UBERON:0001017;1.47e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,8.98e-131,3;UBERON:0005382,8.98e-131,3;UBERON:0001874,9.37e-99,1;UBERON:0000369,1.55e-98,4;UBERON:0002435,1.55e-98,4;UBERON:0000204,1.55e-98,4;UBERON:0010082,1.55e-98,4;UBERON:0009663,4.76e-57,7;UBERON:0001873,4.52e-50,2;UBERON:0010122,4.52e-50,2;UBERON:0002420,9.75e-45,9;UBERON:0000125,9.75e-45,9;UBERON:0007245,9.75e-45,9;UBERON:0002308,9.75e-45,9;UBERON:0010009,9.75e-45,9;UBERON:0010011,9.75e-45,9;UBERON:0000454,9.75e-45,9;UBERON:0002791,2.96e-13,32;UBERON:0001869,2.96e-13,32;UBERON:0003528,1.42e-12,34;UBERON:0002020,1.42e-12,34;UBERON:0001893,1.42e-12,34;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p@chr10:26097547..26097552,+ | |short_description=p@chr10:26097547..26097552,+ | ||
}} | }} |
Latest revision as of 12:48, 23 July 2015
Short description: | p@chr10:26097547..26097552, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:26097547..26097552, + |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 8.98e-131 | 3 |
dorsal striatum | 8.98e-131 | 3 |
putamen | 9.37e-99 | 1 |
corpus striatum | 1.55e-98 | 4 |
striatum | 1.55e-98 | 4 |
ventral part of telencephalon | 1.55e-98 | 4 |
future corpus striatum | 1.55e-98 | 4 |
telencephalic nucleus | 4.76e-57 | 7 |
caudate nucleus | 4.52e-50 | 2 |
future caudate nucleus | 4.52e-50 | 2 |
basal ganglion | 9.75e-45 | 9 |
neural nucleus | 9.75e-45 | 9 |
nuclear complex of neuraxis | 9.75e-45 | 9 |
nucleus of brain | 9.75e-45 | 9 |
aggregate regional part of brain | 9.75e-45 | 9 |
collection of basal ganglia | 9.75e-45 | 9 |
cerebral subcortex | 9.75e-45 | 9 |
regional part of telencephalon | 2.96e-13 | 32 |
cerebral hemisphere | 2.96e-13 | 32 |
brain grey matter | 1.42e-12 | 34 |
gray matter | 1.42e-12 | 34 |
telencephalon | 1.42e-12 | 34 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |