FFCP PHASE1:Hg19::chr10:21581995..21582005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:21581995..21582005,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr10:21581995..21582005,- | |description=CAGE_peak_at_chr10:21581995..21582005,- | ||
|id=chr10:21581995..21582005,- | |id=chr10:21581995..21582005,- | ||
|ontology_enrichment_celltype=CL:0002322!1.77e-22!5;CL:0000039!1.45e-15!7;CL:0000586!1.45e-15!7;CL:0000540!1.80e-07!6;CL:0000031!1.80e-07!6;CL:0000404!1.80e-07!6 | |ontology_enrichment_celltype=CL:0002322!1.77e-22!5;CL:0000039!1.45e-15!7;CL:0000586!1.45e-15!7;CL:0000540!1.80e-07!6;CL:0000031!1.80e-07!6;CL:0000404!1.80e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.48e-30;5!CL:0000540;1.35e-25;6!CL:0000404;1.35e-25;6!CL:0000039;1.04e-21;7!CL:0000586;1.04e-21;7!CL:0002321;1.73e-10;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.26e-30,5;CL:0000540,1.19e-25,6;CL:0000031,1.19e-25,6;CL:0000404,1.19e-25,6;CL:0000039,1.08e-21,7;CL:0000586,1.08e-21,7;CL:0000047,2.00e-19,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.78e-27;10!UBERON:0005564;9.78e-27;10!CL:0000031;1.35e-25;6 | |||
|ontology_enrichment_disease=DOID:3095!5.97e-09!22;DOID:2994!5.97e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.26e-12;22!DOID:2994;2.26e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.30e-12,22;DOID:2994,2.30e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.52e-09!8 | |ontology_enrichment_uberon=UBERON:0000473!3.52e-09!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.35e-19;8!UBERON:0003135;4.52e-14;11!UBERON:0000991;6.05e-13;21!UBERON:0000922;7.96e-08;49!UBERON:0003101;2.49e-07;22!UBERON:0000079;2.49e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.49e-19,8;UBERON:0003135,4.62e-14,11;UBERON:0000991,6.15e-13,21;UBERON:0009196,6.15e-13,21;UBERON:0009117,6.15e-13,21;UBERON:0005564,6.15e-13,21;UBERON:0004176,2.30e-12,22;UBERON:0003101,2.52e-07,22;UBERON:0000079,2.52e-07,22 | |||
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| ||
|short_description=p@chr10:21581995..21582005,- | |short_description=p@chr10:21581995..21582005,- | ||
}} | }} |
Latest revision as of 12:31, 23 July 2015
Short description: | p@chr10:21581995..21582005, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:21581995..21582005, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.26e-30 | 5 |
neuron | 1.19e-25 | 6 |
neuroblast | 1.19e-25 | 6 |
electrically signaling cell | 1.19e-25 | 6 |
germ line cell | 1.08e-21 | 7 |
germ cell | 1.08e-21 | 7 |
neuronal stem cell | 2.00e-19 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 4.49e-19 | 8 |
male reproductive organ | 4.62e-14 | 11 |
gonad | 6.15e-13 | 21 |
indifferent external genitalia | 6.15e-13 | 21 |
indifferent gonad | 6.15e-13 | 21 |
gonad primordium | 6.15e-13 | 21 |
external genitalia | 2.30e-12 | 22 |
male organism | 2.52e-07 | 22 |
male reproductive system | 2.52e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.30e-12 | 22 |
germ cell cancer | 2.30e-12 | 22 |