FFCP PHASE1:Hg19::chr14:107034971..107034980,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AM279543,AY577299,FJ385326,GQ232913,GQ232958,GU552732,GU552750,S73611,S73613_5end | |association_with_transcript=0bp_to_AM279543,AY577299,FJ385326,GQ232913,GQ232958,GU552732,GU552750,S73611,S73613_5end | ||
|cluster_id=chr14:107034971..107034980,- | |||
|description=CAGE_peak_1_at_AM279543_5end,CAGE_peak_1_at_AY577299_5end,CAGE_peak_1_at_FJ385326_5end,CAGE_peak_1_at_GQ232913_5end,CAGE_peak_1_at_GQ232958_5end,CAGE_peak_1_at_GU552732_5end,CAGE_peak_1_at_GU552750_5end,CAGE_peak_1_at_S73611_5end,CAGE_peak_1_at_S73613_5end | |description=CAGE_peak_1_at_AM279543_5end,CAGE_peak_1_at_AY577299_5end,CAGE_peak_1_at_FJ385326_5end,CAGE_peak_1_at_GQ232913_5end,CAGE_peak_1_at_GQ232958_5end,CAGE_peak_1_at_GU552732_5end,CAGE_peak_1_at_GU552750_5end,CAGE_peak_1_at_S73611_5end,CAGE_peak_1_at_S73613_5end | ||
|id=chr14:107034971..107034980,- | |id=chr14:107034971..107034980,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.10e-50;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.43e-31!115;UBERON:0002106!5.08e-09!3;UBERON:0004854!5.08e-09!3;UBERON:0009034!5.08e-09!3;UBERON:0002095!5.08e-09!3;UBERON:0004782!5.08e-09!3;UBERON:0003281!5.08e-09!3;UBERON:0009664!5.08e-09!3;UBERON:0002296!5.08e-09!3;UBERON:0005602!5.08e-09!3;UBERON:0001179!5.08e-09!3;UBERON:0006293!5.08e-09!3;UBERON:0004177!3.12e-08!7;UBERON:0000029!6.59e-08!1;UBERON:0002372!8.00e-08!1;UBERON:0001961!8.00e-08!1;UBERON:0001744!8.00e-08!1;UBERON:0001735!8.00e-08!1;UBERON:0001154!9.10e-08!1;UBERON:0001153!9.10e-08!1;UBERON:0001831!1.33e-07!1;UBERON:0001567!1.33e-07!1;UBERON:0008801!1.33e-07!1;UBERON:0002363!2.07e-07!1;UBERON:0007647!2.07e-07!1;UBERON:0010115!2.07e-07!1;UBERON:0000178!8.47e-07!15;UBERON:0000179!8.47e-07!15;UBERON:0000463!8.47e-07!15;UBERON:0001007!9.04e-07!155;UBERON:0001555!9.04e-07!155;UBERON:0007026!9.04e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.10e-50;1!UBERON:0000029;3.10e-50;1!UBERON:0001961;3.10e-50;1!UBERON:0001744;3.10e-50;1!UBERON:0001042;3.10e-50;1!UBERON:0001735;3.10e-50;1!UBERON:0006562;6.30e-26;2!UBERON:0002465;8.54e-21;10!UBERON:0001043;8.69e-18;3!UBERON:0002193;5.07e-11;42!UBERON:0002405;2.13e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.46e-50,1;UBERON:0002372,6.58e-50,1;UBERON:0001961,6.58e-50,1;UBERON:0001744,6.58e-50,1;UBERON:0001735,6.58e-50,1;UBERON:0002465,8.54e-21,10;UBERON:0001043,8.00e-18,3;UBERON:0009143,8.00e-18,3;UBERON:0007023,8.86e-08,114 | |||
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|short_description=p1@AM279543,p1@AY577299,p1@FJ385326,p1@GQ232913,p1@GQ232958,p1@GU552732,p1@GU552750,p1@S73611,p1@S73613 | |short_description=p1@AM279543,p1@AY577299,p1@FJ385326,p1@GQ232913,p1@GQ232958,p1@GU552732,p1@GU552750,p1@S73611,p1@S73613 | ||
}} | }} |
Latest revision as of 18:46, 24 July 2015
Short description: | p1@AM279543, p1@AY577299, p1@FJ385326, p1@GQ232913, p1@GQ232958, p1@GU552732, p1@GU552750, p1@S73611, p1@S73613 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AM279543_5end, CAGE_peak_1_at_AY577299_5end, CAGE_peak_1_at_FJ385326_5end, CAGE_peak_1_at_GQ232913_5end, CAGE_peak_1_at_GQ232958_5end, CAGE_peak_1_at_GU552732_5end, CAGE_peak_1_at_GU552750_5end, CAGE_peak_1_at_S73611_5end, CAGE_peak_1_at_S73613_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AM279543, AY577299, FJ385326, GQ232913, GQ232958, GU552732, GU552750, S73611, S73613_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 1.46e-50 | 1 |
tonsil | 6.58e-50 | 1 |
mucosa-associated lymphoid tissue | 6.58e-50 | 1 |
lymphoid tissue | 6.58e-50 | 1 |
tonsillar ring | 6.58e-50 | 1 |
lymphoid system | 8.54e-21 | 10 |
esophagus | 8.00e-18 | 3 |
esophageal region | 8.00e-18 | 3 |
adult organism | 8.86e-08 | 114 |