FFCP PHASE1:Hg19::chr10:18948208..18948219,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000444660,ENST00000456217_5end | |association_with_transcript=-12bp_to_ENST00000444660,ENST00000456217_5end | ||
|cluster_id=chr10:18948208..18948219,- | |||
|description=CAGE_peak_2_at_ENST00000444660_5end,CAGE_peak_2_at_ENST00000456217_5end | |description=CAGE_peak_2_at_ENST00000444660_5end,CAGE_peak_2_at_ENST00000456217_5end | ||
|id=chr10:18948208..18948219,- | |id=chr10:18948208..18948219,- | ||
|ontology_enrichment_celltype=CL:0000791!2.28e-11!18;CL:0000789!2.28e-11!18;CL:0002420!2.28e-11!18;CL:0002419!2.28e-11!18;CL:0000790!2.28e-11!18;CL:0000542!3.10e-10!53;CL:0000051!3.10e-10!53;CL:0000838!5.67e-10!52;CL:0000625!2.24e-08!11;CL:0000084!1.21e-07!25;CL:0000827!1.21e-07!25 | |ontology_enrichment_celltype=CL:0000791!2.28e-11!18;CL:0000789!2.28e-11!18;CL:0002420!2.28e-11!18;CL:0002419!2.28e-11!18;CL:0000790!2.28e-11!18;CL:0000542!3.10e-10!53;CL:0000051!3.10e-10!53;CL:0000838!5.67e-10!52;CL:0000625!2.24e-08!11;CL:0000084!1.21e-07!25;CL:0000827!1.21e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.84e-25;18!CL:0000789;7.84e-25;18!CL:0002419;7.84e-25;18!CL:0000625;2.76e-18;11!CL:0000084;1.05e-16;25!CL:0000624;6.89e-10;6!CL:0000898;3.44e-08;3!CL:0000542;4.45e-08;53!CL:0000623;3.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.41e-25,18;CL:0000789,1.41e-25,18;CL:0002420,1.41e-25,18;CL:0002419,1.41e-25,18;CL:0000790,1.41e-25,18;CL:0000625,3.79e-19,11;CL:0000084,3.21e-17,25;CL:0000827,3.21e-17,25;CL:0000838,1.55e-13,52;CL:0000542,3.58e-13,53;CL:0000051,3.58e-13,53;CL:0000624,7.74e-10,6;CL:0000898,3.19e-08,3;CL:0000623,1.07e-07,3;CL:0000825,1.07e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;7.84e-25;18!CL:0000051;4.45e-08;53!UBERON:0006215;2.73e-07;3!UBERON:0006241;3.81e-07;3!UBERON:0003057;3.81e-07;3!UBERON:0006601;5.91e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-23!57;UBERON:0005068!1.14e-23!57;UBERON:0006241!1.14e-23!57;UBERON:0007135!1.14e-23!57;UBERON:0007023!4.49e-22!115;UBERON:0002616!2.65e-20!59;UBERON:0001017!1.41e-18!82;UBERON:0003080!3.78e-18!42;UBERON:0000955!6.53e-18!69;UBERON:0006238!6.53e-18!69;UBERON:0000073!7.23e-18!94;UBERON:0001016!7.23e-18!94;UBERON:0005743!7.44e-18!86;UBERON:0002780!8.80e-18!41;UBERON:0001890!8.80e-18!41;UBERON:0006240!8.80e-18!41;UBERON:0001893!1.60e-13!34;UBERON:0002020!1.66e-13!34;UBERON:0003528!1.66e-13!34;UBERON:0002346!2.60e-13!90;UBERON:0002791!5.42e-13!33;UBERON:0000153!9.91e-13!129;UBERON:0007811!9.91e-13!129;UBERON:0003075!1.27e-12!86;UBERON:0007284!1.27e-12!86;UBERON:0001869!1.54e-12!32;UBERON:0003056!5.88e-11!61;UBERON:0002619!8.63e-11!22;UBERON:0000033!9.85e-11!123;UBERON:0000956!3.86e-10!25;UBERON:0000203!3.86e-10!25;UBERON:0001950!7.59e-10!20;UBERON:0000924!6.06e-09!173;UBERON:0006601!6.06e-09!173;UBERON:0004121!2.20e-08!169;UBERON:0003076!9.61e-07!15;UBERON:0003057!9.61e-07!15 | |ontology_enrichment_uberon=UBERON:0001049!1.14e-23!57;UBERON:0005068!1.14e-23!57;UBERON:0006241!1.14e-23!57;UBERON:0007135!1.14e-23!57;UBERON:0007023!4.49e-22!115;UBERON:0002616!2.65e-20!59;UBERON:0001017!1.41e-18!82;UBERON:0003080!3.78e-18!42;UBERON:0000955!6.53e-18!69;UBERON:0006238!6.53e-18!69;UBERON:0000073!7.23e-18!94;UBERON:0001016!7.23e-18!94;UBERON:0005743!7.44e-18!86;UBERON:0002780!8.80e-18!41;UBERON:0001890!8.80e-18!41;UBERON:0006240!8.80e-18!41;UBERON:0001893!1.60e-13!34;UBERON:0002020!1.66e-13!34;UBERON:0003528!1.66e-13!34;UBERON:0002346!2.60e-13!90;UBERON:0002791!5.42e-13!33;UBERON:0000153!9.91e-13!129;UBERON:0007811!9.91e-13!129;UBERON:0003075!1.27e-12!86;UBERON:0007284!1.27e-12!86;UBERON:0001869!1.54e-12!32;UBERON:0003056!5.88e-11!61;UBERON:0002619!8.63e-11!22;UBERON:0000033!9.85e-11!123;UBERON:0000956!3.86e-10!25;UBERON:0000203!3.86e-10!25;UBERON:0001950!7.59e-10!20;UBERON:0000924!6.06e-09!173;UBERON:0006601!6.06e-09!173;UBERON:0004121!2.20e-08!169;UBERON:0003076!9.61e-07!15;UBERON:0003057!9.61e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.04e-15;41!UBERON:0001890;7.04e-15;41!UBERON:0000073;1.40e-13;53!UBERON:0002616;1.40e-13;53!UBERON:0001894;8.00e-12;7!UBERON:0001869;3.36e-11;32!UBERON:0002791;3.44e-11;32!UBERON:0003296;1.29e-10;4!UBERON:0010133;1.29e-10;4!UBERON:0001893;2.12e-10;34!UBERON:0003528;9.74e-10;34!UBERON:0002020;9.74e-10;34!UBERON:0002784;2.10e-09;4!UBERON:0000955;5.47e-09;68!UBERON:0001017;1.95e-08;75!UBERON:0002420;2.03e-08;9!UBERON:0000125;2.03e-08;9!UBERON:0007245;2.03e-08;9!UBERON:0002308;2.03e-08;9!UBERON:0010009;2.03e-08;9!UBERON:0010011;2.03e-08;9!UBERON:0000454;2.03e-08;9!UBERON:0005383;5.40e-08;3!UBERON:0005382;5.40e-08;3!UBERON:0009663;5.61e-08;7!UBERON:0001016;1.25e-07;83!UBERON:0002619;1.39e-07;22!UBERON:0002240;3.81e-07;3!UBERON:0005174;3.81e-07;3!UBERON:0001137;3.81e-07;3!UBERON:0001950;6.46e-07;20 | |||
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| ||
|short_description=p2@ENST00000444660,p2@ENST00000456217 | |short_description=p2@ENST00000444660,p2@ENST00000456217 | ||
}} | }} |
Latest revision as of 12:25, 23 July 2015
Short description: | p2@ENST00000444660, p2@ENST00000456217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000444660_5end, CAGE_peak_2_at_ENST00000456217_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000444660, ENST00000456217_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.41e-25 | 18 |
alpha-beta T cell | 1.41e-25 | 18 |
immature T cell | 1.41e-25 | 18 |
mature T cell | 1.41e-25 | 18 |
immature alpha-beta T cell | 1.41e-25 | 18 |
CD8-positive, alpha-beta T cell | 3.79e-19 | 11 |
T cell | 3.21e-17 | 25 |
pro-T cell | 3.21e-17 | 25 |
lymphoid lineage restricted progenitor cell | 1.55e-13 | 52 |
lymphocyte | 3.58e-13 | 53 |
common lymphoid progenitor | 3.58e-13 | 53 |
CD4-positive, alpha-beta T cell | 7.74e-10 | 6 |
naive T cell | 3.19e-08 | 3 |
natural killer cell | 1.07e-07 | 3 |
pro-NK cell | 1.07e-07 | 3 |