FFCP PHASE1:Hg19::chr10:135340452..135340468,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:135340452..135340468,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr10:135340452..135340468,- | |description=CAGE_peak_at_chr10:135340452..135340468,- | ||
|id=chr10:135340452..135340468,- | |id=chr10:135340452..135340468,- | ||
|ontology_enrichment_celltype=CL:0000181!2.36e-12!12;CL:0000417!2.36e-12!12;CL:0000668!2.36e-12!12;CL:0000414!2.36e-12!12;CL:0000412!2.36e-12!12;CL:0000182!2.36e-12!12 | |ontology_enrichment_celltype=CL:0000181!2.36e-12!12;CL:0000417!2.36e-12!12;CL:0000668!2.36e-12!12;CL:0000414!2.36e-12!12;CL:0000412!2.36e-12!12;CL:0000182!2.36e-12!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.41e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.41e-25,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!1.21e-16!1;UBERON:0001961!1.21e-16!1;UBERON:0001744!1.21e-16!1;UBERON:0001735!1.21e-16!1;UBERON:0003112!1.93e-16!1;UBERON:0000032!1.93e-16!1;UBERON:0005253!1.93e-16!1;UBERON:0003128!1.93e-16!1;UBERON:0002241!1.93e-16!1;UBERON:0001703!1.93e-16!1;UBERON:0004761!1.93e-16!1;UBERON:0009617!1.93e-16!1;UBERON:0002107!1.96e-13!19;UBERON:0006925!1.96e-13!19;UBERON:0008836!1.96e-13!19;UBERON:0008835!1.21e-11!22;UBERON:0003894!1.21e-11!22;UBERON:0009854!3.77e-11!23;UBERON:0007499!2.80e-10!25;UBERON:0009497!2.80e-10!25;UBERON:0000015!2.80e-10!25;UBERON:0002423!2.80e-10!25;UBERON:0006235!2.80e-10!25;UBERON:0004161!2.80e-10!25;UBERON:0005057!6.79e-10!26;UBERON:0009856!6.79e-10!26;UBERON:0002365!2.45e-08!31;UBERON:0002330!2.45e-08!31;UBERON:0002368!2.08e-07!35;UBERON:0001042!4.96e-07!10;UBERON:0009145!4.96e-07!10 | |ontology_enrichment_uberon=UBERON:0002372!1.21e-16!1;UBERON:0001961!1.21e-16!1;UBERON:0001744!1.21e-16!1;UBERON:0001735!1.21e-16!1;UBERON:0003112!1.93e-16!1;UBERON:0000032!1.93e-16!1;UBERON:0005253!1.93e-16!1;UBERON:0003128!1.93e-16!1;UBERON:0002241!1.93e-16!1;UBERON:0001703!1.93e-16!1;UBERON:0004761!1.93e-16!1;UBERON:0009617!1.93e-16!1;UBERON:0002107!1.96e-13!19;UBERON:0006925!1.96e-13!19;UBERON:0008836!1.96e-13!19;UBERON:0008835!1.21e-11!22;UBERON:0003894!1.21e-11!22;UBERON:0009854!3.77e-11!23;UBERON:0007499!2.80e-10!25;UBERON:0009497!2.80e-10!25;UBERON:0000015!2.80e-10!25;UBERON:0002423!2.80e-10!25;UBERON:0006235!2.80e-10!25;UBERON:0004161!2.80e-10!25;UBERON:0005057!6.79e-10!26;UBERON:0009856!6.79e-10!26;UBERON:0002365!2.45e-08!31;UBERON:0002330!2.45e-08!31;UBERON:0002368!2.08e-07!35;UBERON:0001042!4.96e-07!10;UBERON:0009145!4.96e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.40e-28;19!UBERON:0006925;2.40e-28;19!UBERON:0002423;1.01e-21;25!UBERON:0002365;3.20e-18;31!UBERON:0002330;3.20e-18;31!UBERON:0002368;1.09e-14;33!UBERON:0000949;2.50e-12;43!UBERON:0005172;4.26e-09;52!UBERON:0005173;4.26e-09;52!UBERON:0002530;7.15e-07;57!UBERON:0001007;9.96e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.49e-28,19;UBERON:0006925,2.49e-28,19;UBERON:0008836,2.49e-28,19;UBERON:0008835,1.43e-24,22;UBERON:0003894,1.43e-24,22;UBERON:0009854,1.55e-23,23;UBERON:0007499,1.03e-21,25;UBERON:0009497,1.03e-21,25;UBERON:0000015,1.03e-21,25;UBERON:0002423,1.03e-21,25;UBERON:0006235,1.03e-21,25;UBERON:0004161,1.03e-21,25;UBERON:0009856,6.62e-21,26;UBERON:0002365,1.20e-17,31;UBERON:0002330,1.20e-17,31;UBERON:0002368,1.05e-15,35;UBERON:0000949,2.36e-12,45;UBERON:0003929,2.17e-10,54;UBERON:0005172,2.17e-10,54;UBERON:0005173,2.17e-10,54;UBERON:0002530,1.49e-09,59;UBERON:0002417,2.10e-09,60;UBERON:0000916,2.10e-09,60;UBERON:0005911,5.19e-07,82 | |||
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|short_description=p@chr10:135340452..135340468,- | |short_description=p@chr10:135340452..135340468,- | ||
}} | }} |
Latest revision as of 11:54, 23 July 2015
Short description: | p@chr10:135340452..135340468, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:135340452..135340468, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.41e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.49e-28 | 19 |
digestive gland | 2.49e-28 | 19 |
liver bud | 2.49e-28 | 19 |
hepatic diverticulum | 1.43e-24 | 22 |
liver primordium | 1.43e-24 | 22 |
digestive tract diverticulum | 1.55e-23 | 23 |
epithelial sac | 1.03e-21 | 25 |
epithelium of foregut-midgut junction | 1.03e-21 | 25 |
anatomical boundary | 1.03e-21 | 25 |
hepatobiliary system | 1.03e-21 | 25 |
foregut-midgut junction | 1.03e-21 | 25 |
septum transversum | 1.03e-21 | 25 |
sac | 6.62e-21 | 26 |
exocrine gland | 1.20e-17 | 31 |
exocrine system | 1.20e-17 | 31 |
endocrine gland | 1.05e-15 | 35 |
endocrine system | 2.36e-12 | 45 |
gut epithelium | 2.17e-10 | 54 |
abdomen element | 2.17e-10 | 54 |
abdominal segment element | 2.17e-10 | 54 |
gland | 1.49e-09 | 59 |
abdominal segment of trunk | 2.10e-09 | 60 |
abdomen | 2.10e-09 | 60 |
endo-epithelium | 5.19e-07 | 82 |