FFCP PHASE1:Mm9::chr5:122660337..122660362,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74096 | |EntrezGene=74096 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U2S8 | |UniProt=Q3U2S8 | ||
|association_with_transcript=30bp_to_NM_028752,uc008zkw.1_5end | |association_with_transcript=30bp_to_NM_028752,uc008zkw.1_5end | ||
|cluster_id=chr5:122660337..122660362,+ | |||
|description=CAGE_peak_2_at_Hvcn1_5end | |description=CAGE_peak_2_at_Hvcn1_5end | ||
|id=chr5:122660337..122660362,+ | |id=chr5:122660337..122660362,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.53e-11,6;CL:0000556,4.53e-11,6;CL:0000763,2.11e-08,16;CL:0000839,2.31e-07,13;CL:0000050,5.10e-07,9;CL:0000049,1.00e-06,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.59e-11!70;UBERON:0002193!7.82e-11!48;UBERON:0002390!4.23e-09!45;UBERON:0003061!4.23e-09!45;UBERON:0001474!2.62e-08!22;UBERON:0004765!2.62e-08!22;UBERON:0001434!2.62e-08!22;UBERON:0002204!4.01e-08!32;UBERON:0002371!1.21e-07!16;UBERON:0003081!5.48e-07!88 | |ontology_enrichment_uberon=UBERON:0002405!5.59e-11!70;UBERON:0002193!7.82e-11!48;UBERON:0002390!4.23e-09!45;UBERON:0003061!4.23e-09!45;UBERON:0001474!2.62e-08!22;UBERON:0004765!2.62e-08!22;UBERON:0001434!2.62e-08!22;UBERON:0002204!4.01e-08!32;UBERON:0002371!1.21e-07!16;UBERON:0003081!5.48e-07!88 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.14e-13,48;UBERON:0002405,2.14e-13,48;UBERON:0001474,2.33e-13,22;UBERON:0004765,2.33e-13,22;UBERON:0001434,2.33e-13,22;UBERON:0002204,1.56e-12,32;UBERON:0002371,2.53e-12,16;UBERON:0002390,1.91e-10,45;UBERON:0003061,1.91e-10,45;UBERON:0003887,1.58e-07,10;UBERON:0002106,3.42e-07,6;UBERON:0004457,3.42e-07,6;UBERON:0000042,3.42e-07,6;UBERON:0004854,3.42e-07,6;UBERON:0009034,3.42e-07,6;UBERON:0002095,3.42e-07,6;UBERON:0004782,3.42e-07,6;UBERON:0003281,3.42e-07,6;UBERON:0009664,3.42e-07,6;UBERON:0002296,3.42e-07,6;UBERON:0005602,3.42e-07,6;UBERON:0001179,3.42e-07,6;UBERON:0006293,3.42e-07,6;UBERON:0003081,3.83e-07,87 | |||
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|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0.174840804837995,16.6554880907831,26.9292105628469,4.89693314689703,151.106377206596,133.001000597567,132.409571360985,0.680346321208558,0.794327609607082,0,4.7997726838022,7.34109699414944,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,25.5304294749514,10.9386948233332,36.6466620781659,41.764435650202,25.9557284284209,41.2683800076481,0.125896817975577,0,0,0,0,0,0,0,0,144.293041209653,0.725362142011344,1.34437519656986,0.257259436035947,0,0,0,0,0,0,0,4.04954872776629,0.988866362566974,5.6838409195688,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,0,0,0,0,3.5111105032938,0,0,0,0,0,0,0,0,0,0,2.05530983494308,68.6185391665005,1.7813056687779,0,0,0,0.150722640552623,0,0.376999773989026,0,1.01219549843938,18.5768215909474,0.808834249737046,5.96272099843063,2.42437626567611,5.59175283654366,0,0,0.766371165625774,0.239630249011841,0,0.635351135365324,0,0.457500602818626,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,8.33526703087623,3.28539585963777,0.420883711772948,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0.199034266818493,1.40442637462647,1.02939162845886,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.324275238183423,0.438599962275997,1.09775057645525,0.671032093801859,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0,0,1.89811624617805,0.164698954724011,0.251335208800269,0.397912944082302,1.16978452271472,0,1.29682829924817,0.597423819763102,0,0,0,0,0,0,0.189709611372772,0.147610147979602,0.470996183524124,0.493588655687202,0,0.166845105716094,0,0,0.608580364165509,0.482354319504834,0.25462585178142,0.575392274901621,0.648540907100142,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.505157755894224,0.358794827043824,0,10.3461786493299,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,2.52216230569906,1.7717175171902,2.71073106717728,7.04612253277673,9.15230403889247,8.38964539772767,1.50791283939272,1.63171705145613,3.93411418415229,3.86311444826625,0.481651769963376,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0.162886959353576,0.659880491890142,0,0,0,0,0.295301892880773,0,0,0,0,1.58018378967908,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0,0.328281799490123,2.91480836629851,0,25.2888903580822,0.206386867963223,1.48155621895769,11.8672127912955,28.7057878214153,40.722514830761,0,0.419854356970974,0.552799895217695,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0.518459893167171,6.21339313086926,0,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0.288030006257865,3.79213344753814,0,0.102710957164827,0.25984164595559,0,0.198681354781265,0.961563596159751,0.738447635872886,0.605798699688886,0.685861259894999,1.00826185136841,1.75424185331554,0.769694733122636,1.16876902181569,0,0,0,0,0,0.375364950902364,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.280924522409647,0.0640251524048693,0.17230640686684,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0,0,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0,0.192906610981141,0,0.467863216890817,0.429742108096597,0.191288332068843,0.661774257358546,0.927471342481686 | ||
|short_description=p2@Hvcn1 | |short_description=p2@Hvcn1 | ||
}} | }} |
Latest revision as of 19:56, 1 October 2015
Short description: | p2@Hvcn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hvcn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 30bp_to_NM_028752, uc008zkw.1_5end |
EntrezGene: | Hvcn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.53e-11 | 6 |
megakaryocyte | 4.53e-11 | 6 |
myeloid cell | 2.11e-08 | 16 |
myeloid lineage restricted progenitor cell | 2.31e-07 | 13 |
megakaryocyte-erythroid progenitor cell | 5.10e-07 | 9 |
common myeloid progenitor | 1.00e-06 | 19 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.14e-13 | 48 |
immune system | 2.14e-13 | 48 |
bone element | 2.33e-13 | 22 |
skeletal element | 2.33e-13 | 22 |
skeletal system | 2.33e-13 | 22 |
musculoskeletal system | 1.56e-12 | 32 |
bone marrow | 2.53e-12 | 16 |
hematopoietic system | 1.91e-10 | 45 |
blood island | 1.91e-10 | 45 |
intraembryonic coelom | 1.58e-07 | 10 |
spleen | 3.42e-07 | 6 |
cavity lining | 3.42e-07 | 6 |
serous membrane | 3.42e-07 | 6 |
gastrointestinal system mesentery | 3.42e-07 | 6 |
stomach region | 3.42e-07 | 6 |
mesentery | 3.42e-07 | 6 |
gastrointestinal system serosa | 3.42e-07 | 6 |
mesentery of stomach | 3.42e-07 | 6 |
gut mesentery | 3.42e-07 | 6 |
dorsal mesentery | 3.42e-07 | 6 |
dorsal mesogastrium | 3.42e-07 | 6 |
peritoneal cavity | 3.42e-07 | 6 |
spleen primordium | 3.42e-07 | 6 |
lateral plate mesoderm | 3.83e-07 | 87 |