FFCP PHASE1:Hg19::chr10:125968601..125968614,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:125968601..125968614,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:125968601..125968614,- | |description=CAGE_peak_at_chr10:125968601..125968614,- | ||
|id=chr10:125968601..125968614,- | |id=chr10:125968601..125968614,- | ||
|ontology_enrichment_celltype=CL:0002057!3.53e-109!42;CL:0000860!1.68e-101!45;CL:0002194!1.79e-74!63;CL:0000576!1.79e-74!63;CL:0000040!1.79e-74!63;CL:0000559!1.79e-74!63;CL:0000766!5.90e-74!76;CL:0002009!4.95e-72!65;CL:0000839!1.59e-66!70;CL:0000557!1.62e-65!71;CL:0000763!2.36e-48!112;CL:0000049!2.36e-48!112;CL:0000738!3.21e-45!140;CL:0002087!1.76e-39!119;CL:0000037!1.24e-35!172;CL:0000566!1.24e-35!172;CL:0002031!4.25e-35!124;CL:0000988!2.54e-33!182;CL:0002032!7.73e-31!165;CL:0000837!7.73e-31!165;CL:0000767!3.76e-16!3;CL:0000134!1.20e-13!358;CL:0002320!2.98e-13!365;CL:0000219!7.33e-12!390;CL:0000048!3.41e-10!430;CL:0000723!5.88e-10!436;CL:0000034!1.19e-09!444;CL:0000784!1.06e-07!3 | |ontology_enrichment_celltype=CL:0002057!3.53e-109!42;CL:0000860!1.68e-101!45;CL:0002194!1.79e-74!63;CL:0000576!1.79e-74!63;CL:0000040!1.79e-74!63;CL:0000559!1.79e-74!63;CL:0000766!5.90e-74!76;CL:0002009!4.95e-72!65;CL:0000839!1.59e-66!70;CL:0000557!1.62e-65!71;CL:0000763!2.36e-48!112;CL:0000049!2.36e-48!112;CL:0000738!3.21e-45!140;CL:0002087!1.76e-39!119;CL:0000037!1.24e-35!172;CL:0000566!1.24e-35!172;CL:0002031!4.25e-35!124;CL:0000988!2.54e-33!182;CL:0002032!7.73e-31!165;CL:0000837!7.73e-31!165;CL:0000767!3.76e-16!3;CL:0000134!1.20e-13!358;CL:0002320!2.98e-13!365;CL:0000219!7.33e-12!390;CL:0000048!3.41e-10!430;CL:0000723!5.88e-10!436;CL:0000034!1.19e-09!444;CL:0000784!1.06e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.22e-111;33!CL:0002057;2.22e-111;33!CL:0000473;2.96e-78;39!CL:0000234;2.96e-78;39!CL:0000576;9.94e-53;48!CL:0000766;3.90e-31;69!CL:0000763;5.10e-14;100!CL:0002087;6.34e-14;104!CL:0000738;4.83e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.10e-96,42;CL:0002057,1.10e-96,42;CL:0000473,3.10e-84,48;CL:0000234,3.10e-84,48;CL:0002194,8.49e-67,59;CL:0000576,8.49e-67,59;CL:0000040,8.49e-67,59;CL:0000559,8.49e-67,59;CL:0002009,1.51e-64,61;CL:0000766,1.45e-59,72;CL:0000839,1.66e-59,66;CL:0000557,1.38e-58,67;CL:0000763,7.07e-39,108;CL:0000049,7.07e-39,108;CL:0002087,4.57e-33,115;CL:0002031,1.43e-31,120;CL:0000738,2.76e-30,136;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0000037,6.09e-24,168;CL:0000988,1.45e-22,177;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0000219,1.85e-08,386;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.36e-73;42!CL:0000049;4.67e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.50e-57!80;UBERON:0001474!3.73e-53!86;UBERON:0002390!4.83e-47!102;UBERON:0003061!4.83e-47!102;UBERON:0004765!2.01e-44!101;UBERON:0001434!2.01e-44!101;UBERON:0002193!2.55e-42!112;UBERON:0002405!2.62e-38!115;UBERON:0002204!1.68e-24!167;UBERON:0003081!5.83e-19!216;UBERON:0002384!1.03e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.20e-51,76;UBERON:0001474,1.89e-47,82;UBERON:0004765,5.23e-43,90;UBERON:0002405,1.55e-41,93;UBERON:0002390,2.78e-39,98;UBERON:0003061,2.78e-39,98;UBERON:0001434,1.92e-38,100;UBERON:0002193,2.16e-35,108;UBERON:0002204,7.74e-22,167;UBERON:0003081,2.11e-17,203;UBERON:0000926,5.07e-10,315;UBERON:0004120,5.07e-10,315;UBERON:0006603,5.07e-10,315;UBERON:0002384,5.20e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.15148819429164,0.928896739896456,0,0,0,0,0,0,0,0.401088894940283,0.651032612147555,0,0,0,0.726991193897824,0,0.242584061187816,3.71886459049095,4.11167888021826,8.05236564327269,2.58923153089935,3.58624989140741,2.60130452877444,3.10271112662957,3.22742341791913,2.70852973188684,1.69418105588344,3.27487380069415,1.12361742222542,1.83650335422542,5.45579346029359,1.27867425159808,0,0.398927315243264,0.426224750532694,1.45104619314292,1.70215567407342,0,2.26123798731069,2.08593167368081,3.9093992046921,0,2.20966581592539,1.58231193720442,0,0.637812899895131,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.15148819429164,0.928896739896456,0,0,0,0,0,0,0,0.401088894940283,0.651032612147555,0,0,0,0.726991193897824,0,0.242584061187816,3.71886459049095,4.11167888021826,8.05236564327269,2.58923153089935,3.58624989140741,2.60130452877444,3.10271112662957,3.22742341791913,2.70852973188684,1.69418105588344,3.27487380069415,1.12361742222542,1.83650335422542,5.45579346029359,1.27867425159808,0,0.398927315243264,0.426224750532694,1.45104619314292,1.70215567407342,0,2.26123798731069,2.08593167368081,3.9093992046921,0,2.20966581592539,1.58231193720442,0,0.637812899895131,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:125968601..125968614,- | |short_description=p@chr10:125968601..125968614,- | ||
}} | }} |
Latest revision as of 11:20, 23 July 2015
Short description: | p@chr10:125968601..125968614, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:125968601..125968614, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.10e-96 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.10e-96 | 42 |
defensive cell | 3.10e-84 | 48 |
phagocyte | 3.10e-84 | 48 |
monopoietic cell | 8.49e-67 | 59 |
monocyte | 8.49e-67 | 59 |
monoblast | 8.49e-67 | 59 |
promonocyte | 8.49e-67 | 59 |
macrophage dendritic cell progenitor | 1.51e-64 | 61 |
myeloid leukocyte | 1.45e-59 | 72 |
myeloid lineage restricted progenitor cell | 1.66e-59 | 66 |
granulocyte monocyte progenitor cell | 1.38e-58 | 67 |
myeloid cell | 7.07e-39 | 108 |
common myeloid progenitor | 7.07e-39 | 108 |
nongranular leukocyte | 4.57e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 1.43e-31 | 120 |
leukocyte | 2.76e-30 | 136 |
hematopoietic oligopotent progenitor cell | 4.08e-25 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-25 | 161 |
hematopoietic stem cell | 6.09e-24 | 168 |
hematopoietic cell | 1.45e-22 | 177 |
mesenchymal cell | 1.30e-09 | 354 |
connective tissue cell | 2.34e-09 | 361 |
motile cell | 1.85e-08 | 386 |
multi fate stem cell | 2.34e-07 | 427 |
somatic stem cell | 3.32e-07 | 433 |
stem cell | 5.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.20e-51 | 76 |
bone element | 1.89e-47 | 82 |
skeletal element | 5.23e-43 | 90 |
immune system | 1.55e-41 | 93 |
hematopoietic system | 2.78e-39 | 98 |
blood island | 2.78e-39 | 98 |
skeletal system | 1.92e-38 | 100 |
hemolymphoid system | 2.16e-35 | 108 |
musculoskeletal system | 7.74e-22 | 167 |
lateral plate mesoderm | 2.11e-17 | 203 |
mesoderm | 5.07e-10 | 315 |
mesoderm-derived structure | 5.07e-10 | 315 |
presumptive mesoderm | 5.07e-10 | 315 |
connective tissue | 5.20e-09 | 371 |