FFCP PHASE1:Hg19::chr10:123872261..123872284,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10579 | |EntrezGene=10579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11523 | |HGNC=11523 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-260bp_to_ENST00000493951_5end | |association_with_transcript=-260bp_to_ENST00000493951_5end | ||
|cluster_id=chr10:123872261..123872284,+ | |||
|description=CAGE_peak_5_at_TACC2_5end | |description=CAGE_peak_5_at_TACC2_5end | ||
|id=chr10:123872261..123872284,+ | |id=chr10:123872261..123872284,+ | ||
|ontology_enrichment_celltype=CL:0002078!8.74e-11!44;CL:0002139!3.76e-10!24;CL:0000115!3.98e-10!35;CL:0000071!2.40e-09!18;CL:0002546!2.40e-09!18;CL:0000066!1.70e-08!254;CL:0000220!8.42e-07!246 | |ontology_enrichment_celltype=CL:0002078!8.74e-11!44;CL:0002139!3.76e-10!24;CL:0000115!3.98e-10!35;CL:0000071!2.40e-09!18;CL:0002546!2.40e-09!18;CL:0000066!1.70e-08!254;CL:0000220!8.42e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000071;3.30e-11;18!CL:0002139;7.85e-11;24!CL:0000115;8.57e-11;36!CL:0002078;6.13e-08;45!CL:1000413;7.47e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,1.86e-12,45;CL:0000115,5.72e-12,36;CL:0000071,3.42e-11,18;CL:0002546,3.42e-11,18;CL:0002139,8.57e-11,24;CL:0000213,1.53e-07,58;CL:0000215,1.53e-07,58;CL:1000413,8.45e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;3.30e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!1.63e-19!286;UBERON:0004111!1.19e-18!241;UBERON:0000481!3.87e-16!347;UBERON:0000119!3.81e-14!312;UBERON:0000025!4.88e-14!194;UBERON:0000467!7.01e-14!625;UBERON:0000483!1.09e-13!309;UBERON:0000480!1.28e-13!626;UBERON:0003914!2.92e-13!118;UBERON:0000468!8.67e-13!659;UBERON:0003104!1.23e-12!238;UBERON:0009142!1.23e-12!238;UBERON:0000475!4.69e-12!365;UBERON:0000055!3.85e-11!69;UBERON:0002049!3.92e-10!79;UBERON:0007798!3.92e-10!79;UBERON:0001981!7.65e-10!60;UBERON:0007500!7.65e-10!60;UBERON:0004537!7.65e-10!60;UBERON:0006965!7.65e-10!60;UBERON:0002100!1.29e-09!216;UBERON:0001986!2.40e-09!18;UBERON:0004638!2.40e-09!18;UBERON:0004852!2.40e-09!18;UBERON:0007023!8.30e-09!115;UBERON:0003103!8.64e-09!69;UBERON:0004872!9.46e-09!84;UBERON:0006914!1.04e-08!25;UBERON:0002050!1.21e-08!605;UBERON:0005423!1.21e-08!605;UBERON:0000923!1.43e-08!604;UBERON:0005291!1.43e-08!604;UBERON:0006598!1.43e-08!604;UBERON:0002532!1.43e-08!604;UBERON:0000487!1.63e-08!22;UBERON:0000922!2.12e-08!612;UBERON:0001008!3.47e-07!45;UBERON:0001007!3.67e-07!155;UBERON:0001555!3.67e-07!155;UBERON:0007026!3.67e-07!155;UBERON:0000464!4.63e-07!104;UBERON:0006554!7.63e-07!44;UBERON:0004119!8.65e-07!169;UBERON:0000925!8.65e-07!169;UBERON:0006595!8.65e-07!169;UBERON:0000466!8.96e-07!126;UBERON:0001009!9.56e-07!113;UBERON:0005177!9.62e-07!107 | |ontology_enrichment_uberon=UBERON:0000477!1.63e-19!286;UBERON:0004111!1.19e-18!241;UBERON:0000481!3.87e-16!347;UBERON:0000119!3.81e-14!312;UBERON:0000025!4.88e-14!194;UBERON:0000467!7.01e-14!625;UBERON:0000483!1.09e-13!309;UBERON:0000480!1.28e-13!626;UBERON:0003914!2.92e-13!118;UBERON:0000468!8.67e-13!659;UBERON:0003104!1.23e-12!238;UBERON:0009142!1.23e-12!238;UBERON:0000475!4.69e-12!365;UBERON:0000055!3.85e-11!69;UBERON:0002049!3.92e-10!79;UBERON:0007798!3.92e-10!79;UBERON:0001981!7.65e-10!60;UBERON:0007500!7.65e-10!60;UBERON:0004537!7.65e-10!60;UBERON:0006965!7.65e-10!60;UBERON:0002100!1.29e-09!216;UBERON:0001986!2.40e-09!18;UBERON:0004638!2.40e-09!18;UBERON:0004852!2.40e-09!18;UBERON:0007023!8.30e-09!115;UBERON:0003103!8.64e-09!69;UBERON:0004872!9.46e-09!84;UBERON:0006914!1.04e-08!25;UBERON:0002050!1.21e-08!605;UBERON:0005423!1.21e-08!605;UBERON:0000923!1.43e-08!604;UBERON:0005291!1.43e-08!604;UBERON:0006598!1.43e-08!604;UBERON:0002532!1.43e-08!604;UBERON:0000487!1.63e-08!22;UBERON:0000922!2.12e-08!612;UBERON:0001008!3.47e-07!45;UBERON:0001007!3.67e-07!155;UBERON:0001555!3.67e-07!155;UBERON:0007026!3.67e-07!155;UBERON:0000464!4.63e-07!104;UBERON:0006554!7.63e-07!44;UBERON:0004119!8.65e-07!169;UBERON:0000925!8.65e-07!169;UBERON:0006595!8.65e-07!169;UBERON:0000466!8.96e-07!126;UBERON:0001009!9.56e-07!113;UBERON:0005177!9.62e-07!107 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.30e-11;18!UBERON:0001986;3.30e-11;18!UBERON:0004852;3.30e-11;18!UBERON:0000487;2.75e-09;22!UBERON:0006914;4.30e-09;25!UBERON:0003915;7.47e-07;9!UBERON:0004700;7.47e-07;9!UBERON:0001917;7.47e-07;9 | |||
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| ||
|short_description=p5@TACC2 | |short_description=p5@TACC2 | ||
}} | }} |
Latest revision as of 19:50, 16 September 2015
Short description: | p5@TACC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TACC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -260bp_to_ENST00000493951_5end |
EntrezGene: | TACC2 |
HGNC: | 11523 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 1.86e-12 | 45 |
endothelial cell | 5.72e-12 | 36 |
blood vessel endothelial cell | 3.42e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.42e-11 | 18 |
endothelial cell of vascular tree | 8.57e-11 | 24 |
lining cell | 1.53e-07 | 58 |
barrier cell | 1.53e-07 | 58 |
endothelial cell of artery | 8.45e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.42e-11 | 18 |
endothelium | 3.42e-11 | 18 |
cardiovascular system endothelium | 3.42e-11 | 18 |
anatomical conduit | 4.21e-11 | 240 |
epithelial tube | 1.81e-10 | 117 |
vessel | 5.69e-10 | 68 |
simple squamous epithelium | 2.99e-09 | 22 |
squamous epithelium | 3.94e-09 | 25 |
epithelial tube open at both ends | 6.14e-09 | 59 |
blood vessel | 6.14e-09 | 59 |
blood vasculature | 6.14e-09 | 59 |
vascular cord | 6.14e-09 | 59 |
splanchnic layer of lateral plate mesoderm | 1.11e-08 | 83 |
tube | 1.16e-08 | 192 |
vasculature | 5.44e-08 | 78 |
vascular system | 5.44e-08 | 78 |
compound organ | 5.95e-08 | 68 |
cell layer | 6.82e-08 | 309 |
epithelium | 2.21e-07 | 306 |
circulatory system | 5.01e-07 | 112 |
adult organism | 7.51e-07 | 114 |
endothelial tube | 8.45e-07 | 9 |
arterial system endothelium | 8.45e-07 | 9 |
endothelium of artery | 8.45e-07 | 9 |