FFCP PHASE1:Hg19::chr13:76334824..76334862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010thw.1_5end | |association_with_transcript=0bp_to_uc010thw.1_5end | ||
|cluster_id=chr13:76334824..76334862,+ | |||
|coexpression_cluster_id=C3384 | |||
|description=CAGE_peak_2_at_LMO7_5end | |description=CAGE_peak_2_at_LMO7_5end | ||
|id=chr13:76334824..76334862,+ | |id=chr13:76334824..76334862,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.33e-15!254;CL:0000223!1.12e-11!59;CL:0002076!6.35e-10!43 | |ontology_enrichment_celltype=CL:0000066!9.33e-15!254;CL:0000223!1.12e-11!59;CL:0002076!6.35e-10!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.55e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.22e-15,253;CL:0000223,3.25e-14,58;CL:0002076,2.30e-11,42 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.88e-14;29!UBERON:0006595;3.20e-11;86!UBERON:0001041;1.32e-10;30!CL:0000223;6.77e-08;58!UBERON:0003104;2.81e-07;31 | |||
|ontology_enrichment_disease=DOID:305!7.02e-21!106;DOID:0050687!1.33e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:305;2.62e-07;106!DOID:1749;3.76e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.64e-25,106;DOID:0050687,1.36e-13,143;DOID:1749,4.32e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.30e-26!169;UBERON:0000925!2.30e-26!169;UBERON:0006595!2.30e-26!169;UBERON:0004921!8.97e-25!129;UBERON:0004185!8.97e-25!129;UBERON:0001007!1.44e-23!155;UBERON:0001555!1.44e-23!155;UBERON:0007026!1.44e-23!155;UBERON:0000077!1.01e-21!130;UBERON:0007023!5.25e-20!115;UBERON:0001041!2.87e-18!98;UBERON:0001004!3.57e-15!72;UBERON:0005911!9.49e-15!82;UBERON:0000065!1.66e-14!53;UBERON:0008947!4.83e-12!38;UBERON:0003258!4.83e-12!38;UBERON:0000072!8.91e-11!46;UBERON:0000481!1.50e-10!347;UBERON:0005177!2.66e-10!107;UBERON:0000064!9.68e-10!219;UBERON:0005153!1.53e-09!37;UBERON:0003929!3.75e-09!54;UBERON:0000062!4.07e-09!511;UBERON:0000466!5.81e-09!126;UBERON:0005157!6.93e-09!51;UBERON:0002530!1.56e-07!59;UBERON:0001869!1.69e-07!32;UBERON:0001557!2.61e-07!19;UBERON:0003104!2.61e-07!238;UBERON:0009142!2.61e-07!238;UBERON:0002619!2.84e-07!22;UBERON:0005181!4.48e-07!35;UBERON:0001893!5.75e-07!34;UBERON:0002048!8.31e-07!22;UBERON:0000117!8.31e-07!22;UBERON:0000171!8.31e-07!22;UBERON:0000170!8.31e-07!22;UBERON:0005597!8.31e-07!22;UBERON:0000118!8.31e-07!22;UBERON:0003080!9.34e-07!42;UBERON:0001950!9.88e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;5.85e-12;44!UBERON:0000072;1.28e-09;37!UBERON:0001004;1.64e-08;65!UBERON:0002048;1.87e-08;22!UBERON:0000117;1.87e-08;22!UBERON:0000171;1.87e-08;22!UBERON:0000170;1.87e-08;22!UBERON:0005181;6.41e-08;35!UBERON:0002619;8.45e-08;22!UBERON:0001737;1.04e-07;9!UBERON:0001557;1.04e-07;9!UBERON:0005178;1.15e-07;34!UBERON:0002224;1.15e-07;34!UBERON:0001869;1.58e-07;32!UBERON:0001950;3.66e-07;20!UBERON:0004921;5.81e-07;33!UBERON:0002791;6.14e-07;32!UBERON:0004807;8.04e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.59e-28,160;UBERON:0000925,3.59e-28,160;UBERON:0006595,3.59e-28,160;UBERON:0004921,5.93e-27,118;UBERON:0001007,4.54e-26,145;UBERON:0001555,4.54e-26,145;UBERON:0007026,4.54e-26,145;UBERON:0001041,1.27e-21,87;UBERON:0000065,5.48e-18,54;UBERON:0001004,9.85e-18,74;UBERON:0007023,8.39e-17,114;UBERON:0005911,2.23e-15,82;UBERON:0008947,4.01e-15,38;UBERON:0003258,4.01e-15,38;UBERON:0011216,1.50e-14,223;UBERON:0000072,1.95e-13,47;UBERON:0005177,1.44e-10,101;UBERON:0005153,5.94e-10,37;UBERON:0005181,2.68e-09,35;UBERON:0003929,3.06e-09,54;UBERON:0005157,4.66e-09,47;UBERON:0001557,5.58e-09,19;UBERON:0005178,9.09e-09,34;UBERON:0002224,9.09e-09,34;UBERON:0002048,1.81e-08,22;UBERON:0000117,1.81e-08,22;UBERON:0000171,1.81e-08,22;UBERON:0000170,1.81e-08,22;UBERON:0005597,1.81e-08,22;UBERON:0000118,1.81e-08,22;UBERON:0001869,3.83e-08,32;UBERON:0002619,8.25e-08,22;UBERON:0001737,1.03e-07,9;UBERON:0002791,2.29e-07,32;UBERON:0001893,3.04e-07,34;UBERON:0001950,3.66e-07,20;UBERON:0001048,5.85e-07,160;UBERON:0009569,6.63e-07,112;UBERON:0004807,9.71e-07,28 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,16.9556416186041,23.7252397110625,5.89791704751465,1.05506791291381,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.164201178899891,0.550975469195755,0,0,1.08371286321253,5.51652734687356,1.204823675113,6.65557218300218,0,0,0,1.10799081706375,0.401088894940283,0.217010870715852,0,0.971680998056939,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,1.32171328579026,2.24203425192614,0.263384084775077,9.44206896546399,4.71612915298998,4.31763147898969,0.668745981562712,13.3628129319772,12.3096429491031,11.6896037044747,0.222820913770347,0,0.664601683750863,0,0.128091319725675,0,2.63100647365882,2.21080014228679,14.7799573724877,23.4292769796055,33.9776851673936,22.9978152370949,2.15287751125376,6.13152789763074,6.18529401868734,15.9402405972287,5.09704662918555,3.25541726928209,4.75226022224187,11.7448592880663,12.2867146708242,3.74792179657038,5.20909954496837,4.10563998460523,2.01606743224732,0.802320587350522,5.21367853978076,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,30.976551355209,2.18577172975525,3.70784442784429,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.412210116953756,0,0,0.337552664482532,0,0,0,0,0,0,0,3.28543450377605,1.63647672354501,2.29443676311203,0,0,0,0.414644220061482,0,0,0,0,0,0,0,20.8219968070125,22.0845944002313,21.9320037193969,19.3014452281689,18.3018733037621,17.5580258142211,22.3819971545873,27.6672265826738,28.8560367709793,0,0,0.8231480226628,0,72.2503698484436,41.2787431004603,54.9434613213706,0,55.9597395371167,0,2.96325770603289,1.1240175325762,0.603173834469785,4.0738915869753,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0,0,0,0.16798212819886,1.13420077793909,5.10483579406235,11.6253575405585,1.15014803749563,0,0,0.414656231081544,0,0.50496973370552,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,2.95546140302891,1.72502059887614,1.28343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,6.82334486205528,2.80428461064202,2.77491650288955,14.5501234294205,3.32870879020994,0.604780586659361,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,36.7412726758532,1.40354529212299,23.3885711897177,3.55924789310281,0,0.131124414959424,4.96319574198153,7.08541101360616,0.784349769176855,0,4.43316841350078,0,0,0,0,0.541892875087706,0.501689773854853,2.80363900349542,1.66215201785745,0.671624264166535,0,0,0,0,0,73.7773643397692,0,0,0.574265537996172,0.650060246036521,1.6068392984416,0,0,0,0,0,0,0,0.178064071293475,18.8424803511515,4.80475168412765,23.2255136740143,21.7489228839432,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,7.50532479258994,2.68120910214315,3.26672954583968,77.7627794416196,0.43050537267123,0,1.7737206141467,2.06751060186264,3.55213326462519,1.52927441428475,0,5.71756261098694,2.05681136543097,1.94541993357815,1.08006287447623,0.79312517629427,0.106824071127473,0.962479855263359,1.22520107990516,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48562161632879,3.07667176470977,0,0,0,168.314861740071,13.0664459566361,116.10674539351,22.8653958986249,3.51673541026282,0,0.16480387422676,3.1668811219199,4.5827037297746,6.3545300572164,69.5334384077802,0,5.29264663482599,0,49.7870665356191,43.502145446173,0,5.12945709312055,0,0,0.969332746095218,3.8034920246359,0,1.5625665665114,0.0874599999961957,0.724999575434793,8.07933482827048,51.3592373591388,12.0557717701648,0,0,0,11.5146380155799,10.6124865990359,0,0,0,3.07139556015562,5.01116932187355,46.9858018218893,9.15708076195185,0,0,0,0,37.0041345289027,0.183195186803725,3.19820865611181,1.02193298195737,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,72.2314195027438,0,3.98104772431402,19.814494448748,8.55442202907076,0,0,0,0.269604531922708,17.6567082405734,2.34264445725339,0,13.10952946845,0,0.394584402849391,18.1486074072996,1.22429104652196,0.758238955541855,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0.284609546029793,0,18.2237725251887,27.0459016863682,4.17884191585932,9.2605134168276,0,31.832832994109,28.6510122977847,24.6346371159628,54.2168602170265,2.47117154736201,6.55344148263544,0,0,4.62168810477915,77.2427961802472,8.89762904792024,35.6466501214719,2.79733453414982,25.5040038362768,0.114536596165916,1.54435498075768,53.4443300536035,2.48505071130865,41.482150092556,0.407712618220842,0.313808538937,0,0,2.40168115483916,0.136905378891993,0,0,0.262887354279314,3.3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| ||
|short_description=p2@LMO7 | |short_description=p2@LMO7 | ||
}} | }} |
Latest revision as of 00:10, 18 September 2015
Short description: | p2@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LMO7_5end |
Coexpression cluster: | C3384_lung_amniotic_signet_papillotubular_prostate_gall_Hepatocyte |
Association with transcript: | 0bp_to_uc010thw.1_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.22e-15 | 253 |
endodermal cell | 3.25e-14 | 58 |
endo-epithelial cell | 2.30e-11 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.64e-25 | 106 |
cell type cancer | 1.36e-13 | 143 |
squamous cell carcinoma | 4.32e-07 | 14 |