FFCP PHASE1:Hg19::chr13:28903811..28903815,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2321 | |EntrezGene=2321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3763 | |HGNC=3763 | ||
|TSSclassifier=strong | |||
|UniProt=P17948 | |UniProt=P17948 | ||
|association_with_transcript=176bp_to_EF491868_5end | |association_with_transcript=176bp_to_EF491868_5end | ||
|cluster_id=chr13:28903811..28903815,- | |||
|description=CAGE_peak_3_at_FLT1_5end | |description=CAGE_peak_3_at_FLT1_5end | ||
|id=chr13:28903811..28903815,- | |id=chr13:28903811..28903815,- | ||
|ontology_enrichment_celltype=CL:0002139!4.30e-37!24;CL:0000115!1.82e-30!35;CL:0000071!7.30e-30!18;CL:0002546!7.30e-30!18;CL:1000413!1.52e-23!9;CL:0002078!3.48e-23!44;CL:0000222!7.94e-18!119;CL:0000213!9.42e-17!57;CL:0000215!9.42e-17!57;CL:0002594!4.93e-15!4;CL:0002543!1.30e-14!6;CL:0002544!4.99e-14!6;CL:0002618!2.71e-11!3;CL:0005020!7.69e-09!6;CL:0002138!7.69e-09!6;CL:0005022!7.69e-09!6;CL:0000359!1.50e-08!32;CL:0000192!2.27e-07!42;CL:0000514!2.27e-07!42;CL:0002583!2.71e-07!2;CL:0000220!3.27e-07!246;CL:0002589!4.24e-07!2;CL:0002321!4.30e-07!248 | |ontology_enrichment_celltype=CL:0002139!4.30e-37!24;CL:0000115!1.82e-30!35;CL:0000071!7.30e-30!18;CL:0002546!7.30e-30!18;CL:1000413!1.52e-23!9;CL:0002078!3.48e-23!44;CL:0000222!7.94e-18!119;CL:0000213!9.42e-17!57;CL:0000215!9.42e-17!57;CL:0002594!4.93e-15!4;CL:0002543!1.30e-14!6;CL:0002544!4.99e-14!6;CL:0002618!2.71e-11!3;CL:0005020!7.69e-09!6;CL:0002138!7.69e-09!6;CL:0005022!7.69e-09!6;CL:0000359!1.50e-08!32;CL:0000192!2.27e-07!42;CL:0000514!2.27e-07!42;CL:0002583!2.71e-07!2;CL:0000220!3.27e-07!246;CL:0002589!4.24e-07!2;CL:0002321!4.30e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002594;8.60e-54;4!CL:0000071;2.76e-35;18!CL:0002139;2.67e-34;24!CL:1000413;6.89e-24;9!CL:0000115;1.03e-20;36!CL:0002543;2.95e-20;6!CL:0002618;1.94e-18;3!CL:0002568;7.12e-15;1!CL:0002078;5.57e-12;45!CL:0000359;5.15e-10;32!CL:0000213;1.18e-09;58!CL:0000215;1.18e-09;58!CL:0002545;4.85e-08;2!CL:0000076;1.20e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,4.69e-54,4;CL:0000071,2.19e-35,18;CL:0002546,2.19e-35,18;CL:0002139,2.61e-34,24;CL:1000413,6.70e-24,9;CL:0000115,1.13e-22,36;CL:0002543,2.27e-20,6;CL:0002618,1.36e-18,3;CL:0002078,5.27e-18,45;CL:0000222,4.42e-17,121;CL:0002568,7.13e-15,1;CL:0000213,8.25e-14,58;CL:0000215,8.25e-14,58;CL:0000359,1.84e-10,32;CL:0000076,9.09e-10,63;CL:0002545,5.02e-08,2;CL:0000192,9.12e-08,43;CL:0000514,9.12e-08,43;CL:0002321,2.17e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;2.76e-35;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001310;8.60e-54;4!UBERON:0010260;9.79e-53;9!UBERON:0004638;2.76e-35;18!UBERON:0001986;2.76e-35;18!UBERON:0004852;2.76e-35;18!UBERON:0000487;8.34e-29;22!UBERON:0006914;2.66e-25;25!UBERON:0003915;6.89e-24;9!UBERON:0004700;6.89e-24;9!UBERON:0001917;6.89e-24;9!UBERON:0000490;8.19e-22;33!UBERON:0001637;1.09e-18;42!UBERON:0003509;1.09e-18;42!UBERON:0004572;1.09e-18;42!UBERON:0007500;4.89e-17;56!UBERON:0001981;4.89e-17;56!UBERON:0004537;4.89e-17;56!UBERON:0003914;3.46e-16;74!UBERON:0001638;1.00e-13;9!UBERON:0003920;1.00e-13;9!UBERON:0004582;1.00e-13;9!UBERON:0000055;2.86e-13;65!UBERON:0002049;1.17e-12;75!UBERON:0007798;1.17e-12;75!UBERON:0002066;1.85e-11;5!UBERON:0000025;1.97e-08;93!UBERON:0005800;4.85e-08;2!UBERON:0001515;4.85e-08;2!UBERON:0004111;3.47e-07;130!UBERON:0004535;5.31e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,4.69e-54,4;UBERON:0010260,4.58e-53,9;UBERON:0004638,2.19e-35,18;UBERON:0001986,2.19e-35,18;UBERON:0004852,2.19e-35,18;UBERON:0000055,1.85e-31,68;UBERON:0007500,4.93e-31,59;UBERON:0001981,4.93e-31,59;UBERON:0004537,4.93e-31,59;UBERON:0006965,4.93e-31,59;UBERON:0000487,6.91e-29,22;UBERON:0002049,2.94e-27,78;UBERON:0007798,2.94e-27,78;UBERON:0006914,2.25e-25,25;UBERON:0001637,9.15e-25,42;UBERON:0003509,9.15e-25,42;UBERON:0004572,9.15e-25,42;UBERON:0003915,6.70e-24,9;UBERON:0004700,6.70e-24,9;UBERON:0001917,6.70e-24,9;UBERON:0004872,1.07e-21,83;UBERON:0004535,4.06e-19,109;UBERON:0001009,1.44e-18,112;UBERON:0003914,5.26e-15,117;UBERON:0001638,8.39e-14,9;UBERON:0003920,8.39e-14,9;UBERON:0004582,8.39e-14,9;UBERON:0000490,1.06e-13,148;UBERON:0002066,1.50e-11,5;UBERON:0003081,1.49e-09,203;UBERON:0000025,1.59e-08,192;UBERON:0005800,5.02e-08,2;UBERON:0001515,5.02e-08,2;UBERON:0004111,8.38e-08,240 | |||
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| ||
|short_description=p3@FLT1 | |short_description=p3@FLT1 | ||
}} | }} |
Latest revision as of 00:15, 17 September 2015
Short description: | p3@FLT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FLT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 176bp_to_EF491868_5end |
EntrezGene: | FLT1 |
HGNC: | 3763 |
UniProt: | P17948 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 4.69e-54 | 4 |
blood vessel endothelial cell | 2.19e-35 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.19e-35 | 18 |
endothelial cell of vascular tree | 2.61e-34 | 24 |
endothelial cell of artery | 6.70e-24 | 9 |
endothelial cell | 1.13e-22 | 36 |
vein endothelial cell | 2.27e-20 | 6 |
endothelial cell of umbilical vein | 1.36e-18 | 3 |
meso-epithelial cell | 5.27e-18 | 45 |
mesodermal cell | 4.42e-17 | 121 |
mesenchymal stem cell of Wharton's jelly | 7.13e-15 | 1 |
lining cell | 8.25e-14 | 58 |
barrier cell | 8.25e-14 | 58 |
vascular associated smooth muscle cell | 1.84e-10 | 32 |
squamous epithelial cell | 9.09e-10 | 63 |
thoracic aorta endothelial cell | 5.02e-08 | 2 |
smooth muscle cell | 9.12e-08 | 43 |
smooth muscle myoblast | 9.12e-08 | 43 |
embryonic cell | 2.17e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 4.69e-54 | 4 |
umbilical blood vessel | 4.58e-53 | 9 |
blood vessel endothelium | 2.19e-35 | 18 |
endothelium | 2.19e-35 | 18 |
cardiovascular system endothelium | 2.19e-35 | 18 |
vessel | 1.85e-31 | 68 |
epithelial tube open at both ends | 4.93e-31 | 59 |
blood vessel | 4.93e-31 | 59 |
blood vasculature | 4.93e-31 | 59 |
vascular cord | 4.93e-31 | 59 |
simple squamous epithelium | 6.91e-29 | 22 |
vasculature | 2.94e-27 | 78 |
vascular system | 2.94e-27 | 78 |
squamous epithelium | 2.25e-25 | 25 |
artery | 9.15e-25 | 42 |
arterial blood vessel | 9.15e-25 | 42 |
arterial system | 9.15e-25 | 42 |
endothelial tube | 6.70e-24 | 9 |
arterial system endothelium | 6.70e-24 | 9 |
endothelium of artery | 6.70e-24 | 9 |
splanchnic layer of lateral plate mesoderm | 1.07e-21 | 83 |
cardiovascular system | 4.06e-19 | 109 |
circulatory system | 1.44e-18 | 112 |
epithelial tube | 5.26e-15 | 117 |
vein | 8.39e-14 | 9 |
venous blood vessel | 8.39e-14 | 9 |
venous system | 8.39e-14 | 9 |
unilaminar epithelium | 1.06e-13 | 148 |
umbilical vein | 1.50e-11 | 5 |
lateral plate mesoderm | 1.49e-09 | 203 |
tube | 1.59e-08 | 192 |
segment of aorta | 5.02e-08 | 2 |
thoracic aorta | 5.02e-08 | 2 |
anatomical conduit | 8.38e-08 | 240 |