FFCP PHASE1:Hg19::chr10:100180637..100180657,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:100180637..100180657,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr10:100180637..100180657,- | |description=CAGE_peak_at_chr10:100180637..100180657,- | ||
|id=chr10:100180637..100180657,- | |id=chr10:100180637..100180657,- | ||
|ontology_enrichment_celltype=CL:0002622!1.54e-09!3;CL:0000181!2.55e-09!12;CL:0000417!2.55e-09!12;CL:0000668!2.55e-09!12;CL:0000414!2.55e-09!12;CL:0000412!2.55e-09!12;CL:0000182!2.55e-09!12 | |ontology_enrichment_celltype=CL:0002622!1.54e-09!3;CL:0000181!2.55e-09!12;CL:0000417!2.55e-09!12;CL:0000668!2.55e-09!12;CL:0000414!2.55e-09!12;CL:0000412!2.55e-09!12;CL:0000182!2.55e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.33e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.33e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.16e-10;11!UBERON:0009497;5.28e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!5.93e-26!1;UBERON:0007190!1.26e-25!1;UBERON:0002107!1.45e-12!19;UBERON:0006925!1.45e-12!19;UBERON:0008836!1.45e-12!19;UBERON:0008835!6.05e-11!22;UBERON:0003894!6.05e-11!22;UBERON:0009854!1.69e-10!23;UBERON:0007499!1.04e-09!25;UBERON:0009497!1.04e-09!25;UBERON:0000015!1.04e-09!25;UBERON:0002423!1.04e-09!25;UBERON:0006235!1.04e-09!25;UBERON:0004161!1.04e-09!25;UBERON:0006947!1.41e-09!3;UBERON:0004054!1.41e-09!3;UBERON:0005057!2.31e-09!26;UBERON:0009856!2.31e-09!26;UBERON:0002365!5.94e-08!31;UBERON:0002330!5.94e-08!31;UBERON:0003929!8.01e-08!54;UBERON:0005172!1.08e-07!55;UBERON:0005173!1.08e-07!55;UBERON:0005904!1.69e-07!4;UBERON:0002530!3.45e-07!59;UBERON:0002368!4.12e-07!35;UBERON:0002417!5.69e-07!61;UBERON:0000916!5.69e-07!61 | |ontology_enrichment_uberon=UBERON:0001301!5.93e-26!1;UBERON:0007190!1.26e-25!1;UBERON:0002107!1.45e-12!19;UBERON:0006925!1.45e-12!19;UBERON:0008836!1.45e-12!19;UBERON:0008835!6.05e-11!22;UBERON:0003894!6.05e-11!22;UBERON:0009854!1.69e-10!23;UBERON:0007499!1.04e-09!25;UBERON:0009497!1.04e-09!25;UBERON:0000015!1.04e-09!25;UBERON:0002423!1.04e-09!25;UBERON:0006235!1.04e-09!25;UBERON:0004161!1.04e-09!25;UBERON:0006947!1.41e-09!3;UBERON:0004054!1.41e-09!3;UBERON:0005057!2.31e-09!26;UBERON:0009856!2.31e-09!26;UBERON:0002365!5.94e-08!31;UBERON:0002330!5.94e-08!31;UBERON:0003929!8.01e-08!54;UBERON:0005172!1.08e-07!55;UBERON:0005173!1.08e-07!55;UBERON:0005904!1.69e-07!4;UBERON:0002530!3.45e-07!59;UBERON:0002368!4.12e-07!35;UBERON:0002417!5.69e-07!61;UBERON:0000916!5.69e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.37e-22;19!UBERON:0006925;5.37e-22;19!UBERON:0002423;4.64e-17;25!UBERON:0002365;1.90e-14;31!UBERON:0002330;1.90e-14;31!UBERON:0002368;3.84e-10;33!UBERON:0000949;1.59e-09;43!UBERON:0005172;8.24e-08;52!UBERON:0005173;8.24e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.37e-22,19;UBERON:0006925,5.37e-22,19;UBERON:0008836,5.37e-22,19;UBERON:0008835,3.41e-19,22;UBERON:0003894,3.41e-19,22;UBERON:0009854,2.02e-18,23;UBERON:0007499,4.64e-17,25;UBERON:0009497,4.64e-17,25;UBERON:0000015,4.64e-17,25;UBERON:0002423,4.64e-17,25;UBERON:0006235,4.64e-17,25;UBERON:0004161,4.64e-17,25;UBERON:0009856,1.86e-16,26;UBERON:0002365,5.04e-14,31;UBERON:0002330,5.04e-14,31;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0003929,1.34e-08,54;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002530,5.66e-08,59;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74140274919179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74140274919179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:100180637..100180657,- | |short_description=p@chr10:100180637..100180657,- | ||
}} | }} |
Latest revision as of 09:22, 23 July 2015
Short description: | p@chr10:100180637..100180657, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:100180637..100180657, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.33e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.37e-22 | 19 |
digestive gland | 5.37e-22 | 19 |
liver bud | 5.37e-22 | 19 |
hepatic diverticulum | 3.41e-19 | 22 |
liver primordium | 3.41e-19 | 22 |
digestive tract diverticulum | 2.02e-18 | 23 |
epithelial sac | 4.64e-17 | 25 |
epithelium of foregut-midgut junction | 4.64e-17 | 25 |
anatomical boundary | 4.64e-17 | 25 |
hepatobiliary system | 4.64e-17 | 25 |
foregut-midgut junction | 4.64e-17 | 25 |
septum transversum | 4.64e-17 | 25 |
sac | 1.86e-16 | 26 |
exocrine gland | 5.04e-14 | 31 |
exocrine system | 5.04e-14 | 31 |
endocrine gland | 1.42e-12 | 35 |
endocrine system | 4.55e-10 | 45 |
gut epithelium | 1.34e-08 | 54 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
gland | 5.66e-08 | 59 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |