FFCP PHASE1:Mm9::chr3:17226562..17226568,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=253 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:17226562..17226568,- | |||
|description=CAGE_peak_at_chr3:17226562..17226568,- | |description=CAGE_peak_at_chr3:17226562..17226568,- | ||
|id=chr3:17226562..17226568,- | |id=chr3:17226562..17226568,- | ||
|ontology_enrichment_celltype=CL:0000117!8.99e-10!23;CL:0000337!8.99e-10!23 | |ontology_enrichment_celltype=CL:0000117!8.99e-10!23;CL:0000337!8.99e-10!23 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.11e-18!9;UBERON:0000019!1.11e-18!9;UBERON:0000047!1.11e-18!9;UBERON:0004088!1.11e-18!9;UBERON:0002104!1.11e-18!9;UBERON:0001456!1.11e-18!9;UBERON:0003072!1.11e-18!9;UBERON:0003071!1.11e-18!9;UBERON:0004128!1.11e-18!9;UBERON:0002346!2.16e-16!71;UBERON:0003075!2.16e-16!71;UBERON:0007284!2.16e-16!71;UBERON:0001444!6.51e-15!11;UBERON:0003056!4.64e-14!49;UBERON:0000020!1.68e-13!12;UBERON:0001032!1.68e-13!12;UBERON:0004456!1.68e-13!12;UBERON:0000033!2.52e-13!63;UBERON:0004121!3.48e-13!102;UBERON:0000924!3.48e-13!102;UBERON:0006601!3.48e-13!102;UBERON:0005085!2.62e-12!13;UBERON:0002240!2.40e-11!6;UBERON:0005174!2.40e-11!6;UBERON:0001137!2.40e-11!6;UBERON:0001948!5.32e-10!5;UBERON:0002315!5.32e-10!5;UBERON:0001049!1.68e-09!52;UBERON:0005068!1.68e-09!52;UBERON:0006241!1.68e-09!52;UBERON:0007135!1.68e-09!52;UBERON:0001017!6.77e-09!73;UBERON:0005743!6.77e-09!73;UBERON:0002020!7.72e-09!34;UBERON:0000073!1.64e-08!75;UBERON:0001016!1.64e-08!75;UBERON:0007811!3.81e-08!86;UBERON:0003076!3.84e-07!12;UBERON:0003057!3.84e-07!12;UBERON:0000153!5.83e-07!94 | |ontology_enrichment_uberon=UBERON:0000970!1.11e-18!9;UBERON:0000019!1.11e-18!9;UBERON:0000047!1.11e-18!9;UBERON:0004088!1.11e-18!9;UBERON:0002104!1.11e-18!9;UBERON:0001456!1.11e-18!9;UBERON:0003072!1.11e-18!9;UBERON:0003071!1.11e-18!9;UBERON:0004128!1.11e-18!9;UBERON:0002346!2.16e-16!71;UBERON:0003075!2.16e-16!71;UBERON:0007284!2.16e-16!71;UBERON:0001444!6.51e-15!11;UBERON:0003056!4.64e-14!49;UBERON:0000020!1.68e-13!12;UBERON:0001032!1.68e-13!12;UBERON:0004456!1.68e-13!12;UBERON:0000033!2.52e-13!63;UBERON:0004121!3.48e-13!102;UBERON:0000924!3.48e-13!102;UBERON:0006601!3.48e-13!102;UBERON:0005085!2.62e-12!13;UBERON:0002240!2.40e-11!6;UBERON:0005174!2.40e-11!6;UBERON:0001137!2.40e-11!6;UBERON:0001948!5.32e-10!5;UBERON:0002315!5.32e-10!5;UBERON:0001049!1.68e-09!52;UBERON:0005068!1.68e-09!52;UBERON:0006241!1.68e-09!52;UBERON:0007135!1.68e-09!52;UBERON:0001017!6.77e-09!73;UBERON:0005743!6.77e-09!73;UBERON:0002020!7.72e-09!34;UBERON:0000073!1.64e-08!75;UBERON:0001016!1.64e-08!75;UBERON:0007811!3.81e-08!86;UBERON:0003076!3.84e-07!12;UBERON:0003057!3.84e-07!12;UBERON:0000153!5.83e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.11e-15,9;UBERON:0000019,2.11e-15,9;UBERON:0000047,2.11e-15,9;UBERON:0010312,2.11e-15,9;UBERON:0004088,2.11e-15,9;UBERON:0002104,2.11e-15,9;UBERON:0001456,2.11e-15,9;UBERON:0003072,2.11e-15,9;UBERON:0004128,2.11e-15,9;UBERON:0003071,2.11e-15,9;UBERON:0001444,9.53e-13,11;UBERON:0000020,9.49e-12,12;UBERON:0001032,9.49e-12,12;UBERON:0004456,9.49e-12,12;UBERON:0003056,4.27e-11,49;UBERON:0000033,6.65e-11,13;UBERON:0005085,6.65e-11,13;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0010371,1.48e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.127687338085188,0.46081959976873,0.263772575460388,0.457438218012048,0,0,1.12552522006336,0,0.589257170947335,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0.915001205637253,0,0,0,1.24672826735736,0,0,0,0,0.631325567659422,0.650602214813519,0.229902104433473,0.540186389416048,1.50704817835715,1.2246569847239,2.3060469651273,0.843315521037559,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.515559547031063,0,0,1.35004500046361,0,0.906284817968409,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0.342869252385415,0,0,0,0.188218760830661,0,0.365855945745545,0.526139422875686,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.127687338085188,0.46081959976873,0.263772575460388,0.457438218012048,0,0,1.12552522006336,0,0.589257170947335,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0.915001205637253,0,0,0,1.24672826735736,0,0,0,0,0.631325567659422,0.650602214813519,0.229902104433473,0.540186389416048,1.50704817835715,1.2246569847239,2.3060469651273,0.843315521037559,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.515559547031063,0,0,1.35004500046361,0,0.906284817968409,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0.342869252385415,0,0,0,0.188218760830661,0,0.365855945745545,0.526139422875686,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:17226562..17226568,- | |short_description=p@chr3:17226562..17226568,- | ||
}} | }} |
Latest revision as of 07:08, 6 August 2015
Short description: | p@chr3:17226562..17226568, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:17226562..17226568, - |
Coexpression cluster: | MCL_coexpression_mm9:253 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.11e-15 | 9 |
camera-type eye | 2.11e-15 | 9 |
simple eye | 2.11e-15 | 9 |
immature eye | 2.11e-15 | 9 |
ocular region | 2.11e-15 | 9 |
visual system | 2.11e-15 | 9 |
face | 2.11e-15 | 9 |
optic cup | 2.11e-15 | 9 |
optic vesicle | 2.11e-15 | 9 |
eye primordium | 2.11e-15 | 9 |
subdivision of head | 9.53e-13 | 11 |
sense organ | 9.49e-12 | 12 |
sensory system | 9.49e-12 | 12 |
entire sense organ system | 9.49e-12 | 12 |
pre-chordal neural plate | 4.27e-11 | 49 |
head | 6.65e-11 | 13 |
ectodermal placode | 6.65e-11 | 13 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
ecto-epithelium | 1.48e-07 | 73 |