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FFCP PHASE1:Mm9::chrX:5977145..5977179,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=208431
|EntrezGene=208431
|HGNC=
|HGNC=
|MCL_coexpression_id=3757
|TSSclassifier=NA
|UniProt=Q1W617
|UniProt=Q1W617
|association_with_transcript=-83bp_to_NM_001040459,uc009sky.1_5end
|association_with_transcript=-83bp_to_NM_001040459,uc009sky.1_5end
|cluster_id=chrX:5977145..5977179,+
|description=CAGE_peak_3_at_Shroom4_5end
|description=CAGE_peak_3_at_Shroom4_5end
|id=chrX:5977145..5977179,+
|id=chrX:5977145..5977179,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005157!3.27e-10!27;UBERON:0002048!3.28e-09!14;UBERON:0000117!3.28e-09!14;UBERON:0000171!3.28e-09!14;UBERON:0000170!3.28e-09!14;UBERON:0005597!3.28e-09!14;UBERON:0000118!3.28e-09!14;UBERON:0005178!3.55e-09!17;UBERON:0005181!3.55e-09!17;UBERON:0002224!3.55e-09!17;UBERON:0000915!3.55e-09!17;UBERON:0008947!3.55e-09!17;UBERON:0003258!3.55e-09!17;UBERON:0005153!2.55e-08!17;UBERON:0001008!2.57e-07!17;UBERON:0002113!4.31e-07!14;UBERON:0003918!4.31e-07!14;UBERON:0005095!4.31e-07!14;UBERON:0007687!4.31e-07!14;UBERON:0006554!4.90e-07!16;UBERON:0000464!8.69e-07!57
|ontology_enrichment_uberon_v019_2=UBERON:0005157,4.05e-10,20;UBERON:0002048,8.64e-10,14;UBERON:0000117,8.64e-10,14;UBERON:0000171,8.64e-10,14;UBERON:0000170,8.64e-10,14;UBERON:0005597,8.64e-10,14;UBERON:0000118,8.64e-10,14;UBERON:0005178,9.43e-10,17;UBERON:0005181,9.43e-10,17;UBERON:0002224,9.43e-10,17;UBERON:0000915,9.43e-10,17;UBERON:0008947,9.43e-10,17;UBERON:0003258,9.43e-10,17;UBERON:0005153,7.84e-09,17;UBERON:0001008,1.09e-08,19;UBERON:0006554,2.18e-08,18;UBERON:0005177,8.79e-08,79;UBERON:0002113,1.64e-07,14;UBERON:0003918,1.64e-07,14;UBERON:0011143,1.64e-07,14;UBERON:0005095,1.64e-07,14;UBERON:0007687,1.64e-07,14;UBERON:0009569,3.05e-07,66
|phase1_expression=0.960893082628764,0,0,0.30246421130683,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0.0992909512008853,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0,0.380046838912748,0,0,2.54012269383853,3.07532393792285,0,0.866554859253824,0.332469290716985,0.408338712524738,0,0,0,0,0,0,2.39203954153597,0.912392380975631,1.10128051297009,0.782391344348039,0.436050312760893,1.09843091367236,0.58328969722285,1.95980990275508,1.43752564364972,0,0,0,0.514518872071894,0.573066879877513,2.06268836910977,0.404632921719196,0.528990979272033,0.633831403506179,0.677689064138264,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,0.414758449233911,0.945041568321835,0.630974884054146,1.99955689082663,0.220868540951614,0.61245399607477,0.0958454710182364,0,1.10115880999389,1.0214987046815,0.307213066512487,1.18697658957174,0.365950574409639,0.52091337055676,0.558365998002762,0.56276261003168,0.61119299110724,1.76777151284201,0.711858403995515,0.372798891650601,2.27178579999552,3.55186332501892,8.98579914975201,4.30211938490693,0,0,0,0,0.561777680527007,1.02258193546835,2.59786004602869,1.06001872353102,1.12674735821344,1.28326477414318,12.7402619853323,0,2.38140145112336,2.53359865475099,1.51657333504435,1.1418387971906,0,4.15637989381509,1.21439728736295,1.21786191324856,2.99800146432876,3.16517545160507,2.11659672844269,1.88499886994513,3.46072954828123,1.87979163995885,0,1.7794353494215,0.662524555381181,0.484875253135222,0,0.292780797011547,1.04723353406728,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,1.19832511523858,0.915001205637253,0.753926112677186,0.695297280769106,1.02286182932132,1.66230435647648,0.973447578406546,3.66621709861139,1.99051152976149,2.77995034277042,1.26265113531884,3.12289063110489,2.5289231487682,2.34080768746954,1.05493372485001,2.04109497453984,0.768682321709099,1.87403449119458,1.03481348295606,5.38919982332106,3.21480336285293,4.04687585577082,1.97276159184817,4.17070873838397,3.48252166522167,1.85203922767149,3.58261680273288,0,0,0.284163499395593,2.07125772535502,3.28336483973535,1.44049649168812,2.84093682702252,2.36117078096885,2.1597395804233,2.79040733700489,2.14618721119695,2.33530684734339,3.94943639792353,2.62667942526552,1.78351381000883,1.75439984910399,0.219550115291051,1.07365135008297,1.89260953707715,1.23485534855141,0.330418782983798,0.264450566663544,3.19932375802851,3.71578674976702,2.83508414908605,2.21851877085677,1.11189021922435,0.380451252225118,0.474529061544512,1.31759163779209,0.754005626400808,0.795825888164603,0.779856348476481,0,1.08069024937347,0.597423819763102,2.65535061334314,3.54170389090159,5.63538678365402,4.48032921259691,3.49114476901726,6.87331034925122,6.63983639804701,8.26616828685772,8.63493003127561,8.51440431060424,1.1858105083486,1.33476084572875,1.17935397067922,0,0.202860121388503,0,0,1.15078454980324,0.810676133875177,0,2.87536413054709,2.23284568601102,1.5601883655728,0.252578877947112,0.717589654087649,0.482443521363367,4.43407656399851,3.03186258832776,4.4000543639347,4.58311731593008,5.39787571063555,5.69521275302174,6.18913466303636,4.09780660501378,5.2019597555043,6.86540537911202,6.53764551495697,3.11340297959902,4.66249451037918,4.19482269886384,0,0,2.45882136509518,1.10374698521893,1.44495530989013,0.586058432961016,3.11476396215683,0.757412781613119,5.04813151066011,3.12350995437311,2.58508077279359,2.38968797952552,4.23317480756549,2.83076530788832,4.85772842009873,0.876767573733936,1.97643888973262,2.89189184779626,1.13552068166615,2.49291845134157,3.90928702448583,1.64970122972535,0,1.21390318077491,0.604647113929502,1.69744571780308,1.47650946440386,2.45948118355142,1.29214146584111,2.18120237686503,3.92147116223193,1.26414703174326,2.10837217149998,2.06271086496374,1.02131881726136,2.16073312837572,1.03486947026204,2.35770738534752,1.77340233642274,2.14042581122485,1.64549020602121,1.2178597964584,2.58138878870081,9.10877904714427,1.10264199027481,2.63818004706368,1.61464426695906,2.65376869683886,2.14870219205646,2.9545361954111,0.582961673259701,1.29797711407357,0.170870880797853,1.65109494370578,1.48155621895769,0.565105371014073,0.27338845544205,0,0.679913719975421,0.69975726161829,0.414599921413271,0.954670618015114,2.68885594543965,1.21991680276109,2.37611749807963,2.92723614420256,2.62035076495413,2.42755823492677,1.98368293740806,0.785267825952089,1.68499465279331,0,0,2.24274819065968,2.48187735685646,1.75006069509643,2.71235629303235,2.70329800785245,3.75543163666413,2.8644964665669,3.35549902162275,0.966336483304024,0.288030006257865,0,1.21635129174099,1.1298205288131,0.389762468933385,0.716106782669926,0.198681354781265,0.360586348559907,0,0.100966449948148,0.228620419965,0.201652370273681,0,0,0,0.453460767230423,4.88369097422942,1.70456327558004,5.03653849092235,3.09103350451505,2.25218970541418,3.47988086107804,2.78678892802786,1.00314420807073,0,0.460325236507177,0.572895513439397,0.343706364687375,1.37016503954128,0,0,0.45032120322422,0,0.5177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|phase1_expression=0.960893082628764,0,0,0.30246421130683,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0.0992909512008853,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0,0.380046838912748,0,0,2.54012269383853,3.07532393792285,0,0.866554859253824,0.332469290716985,0.408338712524738,0,0,0,0,0,0,2.39203954153597,0.912392380975631,1.10128051297009,0.782391344348039,0.436050312760893,1.09843091367236,0.58328969722285,1.95980990275508,1.43752564364972,0,0,0,0.514518872071894,0.573066879877513,2.06268836910977,0.404632921719196,0.528990979272033,0.633831403506179,0.677689064138264,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,0.414758449233911,0.945041568321835,0.630974884054146,1.99955689082663,0.220868540951614,0.61245399607477,0.0958454710182364,0,1.10115880999389,1.0214987046815,0.307213066512487,1.18697658957174,0.365950574409639,0.52091337055676,0.558365998002762,0.56276261003168,0.61119299110724,1.76777151284201,0.711858403995515,0.372798891650601,2.27178579999552,3.55186332501892,8.98579914975201,4.30211938490693,0,0,0,0,0.561777680527007,1.02258193546835,2.59786004602869,1.06001872353102,1.12674735821344,1.28326477414318,12.7402619853323,0,2.38140145112336,2.53359865475099,1.51657333504435,1.1418387971906,0,4.15637989381509,1.21439728736295,1.21786191324856,2.99800146432876,3.16517545160507,2.11659672844269,1.88499886994513,3.46072954828123,1.87979163995885,0,1.7794353494215,0.662524555381181,0.484875253135222,0,0.292780797011547,1.04723353406728,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,1.19832511523858,0.915001205637253,0.753926112677186,0.695297280769106,1.02286182932132,1.66230435647648,0.973447578406546,3.66621709861139,1.99051152976149,2.77995034277042,1.26265113531884,3.12289063110489,2.5289231487682,2.34080768746954,1.05493372485001,2.04109497453984,0.768682321709099,1.87403449119458,1.03481348295606,5.38919982332106,3.21480336285293,4.04687585577082,1.97276159184817,4.17070873838397,3.48252166522167,1.85203922767149,3.58261680273288,0,0,0.284163499395593,2.07125772535502,3.28336483973535,1.44049649168812,2.84093682702252,2.36117078096885,2.1597395804233,2.79040733700489,2.14618721119695,2.33530684734339,3.94943639792353,2.62667942526552,1.78351381000883,1.75439984910399,0.219550115291051,1.07365135008297,1.89260953707715,1.23485534855141,0.330418782983798,0.264450566663544,3.19932375802851,3.71578674976702,2.83508414908605,2.21851877085677,1.11189021922435,0.380451252225118,0.474529061544512,1.31759163779209,0.754005626400808,0.795825888164603,0.779856348476481,0,1.08069024937347,0.597423819763102,2.65535061334314,3.54170389090159,5.63538678365402,4.48032921259691,3.49114476901726,6.87331034925122,6.63983639804701,8.26616828685772,8.63493003127561,8.51440431060424,1.1858105083486,1.33476084572875,1.17935397067922,0,0.202860121388503,0,0,1.15078454980324,0.810676133875177,0,2.87536413054709,2.23284568601102,1.5601883655728,0.252578877947112,0.717589654087649,0.482443521363367,4.43407656399851,3.03186258832776,4.4000543639347,4.58311731593008,5.39787571063555,5.69521275302174,6.18913466303636,4.09780660501378,5.2019597555043,6.86540537911202,6.53764551495697,3.11340297959902,4.66249451037918,4.19482269886384,0,0,2.45882136509518,1.10374698521893,1.44495530989013,0.586058432961016,3.11476396215683,0.757412781613119,5.04813151066011,3.12350995437311,2.58508077279359,2.38968797952552,4.23317480756549,2.83076530788832,4.85772842009873,0.876767573733936,1.97643888973262,2.89189184779626,1.13552068166615,2.49291845134157,3.90928702448583,1.64970122972535,0,1.21390318077491,0.604647113929502,1.69744571780308,1.47650946440386,2.45948118355142,1.29214146584111,2.18120237686503,3.92147116223193,1.26414703174326,2.10837217149998,2.06271086496374,1.02131881726136,2.16073312837572,1.03486947026204,2.35770738534752,1.77340233642274,2.14042581122485,1.64549020602121,1.2178597964584,2.58138878870081,9.10877904714427,1.10264199027481,2.63818004706368,1.61464426695906,2.65376869683886,2.14870219205646,2.9545361954111,0.582961673259701,1.29797711407357,0.170870880797853,1.65109494370578,1.48155621895769,0.565105371014073,0.27338845544205,0,0.679913719975421,0.69975726161829,0.414599921413271,0.954670618015114,2.68885594543965,1.21991680276109,2.37611749807963,2.92723614420256,2.62035076495413,2.42755823492677,1.98368293740806,0.785267825952089,1.68499465279331,0,0,2.24274819065968,2.48187735685646,1.75006069509643,2.71235629303235,2.70329800785245,3.75543163666413,2.8644964665669,3.35549902162275,0.966336483304024,0.288030006257865,0,1.21635129174099,1.1298205288131,0.389762468933385,0.716106782669926,0.198681354781265,0.360586348559907,0,0.100966449948148,0.228620419965,0.201652370273681,0,0,0,0.453460767230423,4.88369097422942,1.70456327558004,5.03653849092235,3.09103350451505,2.25218970541418,3.47988086107804,2.78678892802786,1.00314420807073,0,0.460325236507177,0.572895513439397,0.343706364687375,1.37016503954128,0,0,0.45032120322422,0,0.5177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|short_description=p3@Shroom4
|short_description=p3@Shroom4
}}
}}

Latest revision as of 22:50, 1 October 2015

Short description:p3@Shroom4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Shroom4_5end
Coexpression cluster:MCL_coexpression_mm9:3757
Association with transcript: -83bp_to_NM_001040459, uc009sky.1_5end
EntrezGene:Shroom4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Shroom4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D92.27
Mouse Schwann, donor2.CNhs12573.11746-123F93.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.99
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.16
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E25.39
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I23.95
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F83.54
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G76.87
kidney, neonate N10.CNhs11206.758-6D56.64
kidney, neonate N20.CNhs11113.832-19I18.27
kidney, neonate N25.CNhs11122.1353-25F38.63
kidney, neonate N30.CNhs11203.1385-42H18.51
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C54.58
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A65.70
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A36.87
lung, neonate N10.CNhs11219.750-23E66.54
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C74.66
lung, neonate N30.CNhs11133.1394-42H24.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G39.11
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H32.65
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B73.76
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.04
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial fold4.05e-1020
lung8.64e-1014
respiratory tube8.64e-1014
respiration organ8.64e-1014
pair of lungs8.64e-1014
lung primordium8.64e-1014
lung bud8.64e-1014
thoracic cavity element9.43e-1017
thoracic segment organ9.43e-1017
thoracic cavity9.43e-1017
thoracic segment of trunk9.43e-1017
respiratory primordium9.43e-1017
endoderm of foregut9.43e-1017
epithelial bud7.84e-0917
renal system1.09e-0819
urinary system structure2.18e-0818
trunk region element8.79e-0879
kidney1.64e-0714
kidney mesenchyme1.64e-0714
upper urinary tract1.64e-0714
kidney rudiment1.64e-0714
kidney field1.64e-0714
subdivision of trunk3.05e-0766
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