FFCP PHASE1:Mm9::chr2:157917477..157917492,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72340 | |EntrezGene=72340 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_NR_040609,uc008npq.1_5end | |association_with_transcript=40bp_to_NR_040609,uc008npq.1_5end | ||
|cluster_id=chr2:157917477..157917492,- | |||
|description=CAGE_peak_1_at_2010009K17Rik_5end | |description=CAGE_peak_1_at_2010009K17Rik_5end | ||
|id=chr2:157917477..157917492,- | |id=chr2:157917477..157917492,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,2.82e-12,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!3.24e-11!26;UBERON:0000990!3.24e-11!26;UBERON:0003133!4.76e-11!24;UBERON:0000991!1.34e-09!18;UBERON:0005564!1.34e-09!18;UBERON:0004176!1.11e-08!17;UBERON:0009196!1.11e-08!17;UBERON:0009117!1.11e-08!17;UBERON:0005409!2.55e-08!59;UBERON:0000160!9.82e-08!43;UBERON:0003100!7.03e-07!11;UBERON:0003135!7.98e-07!15 | |ontology_enrichment_uberon=UBERON:0005156!3.24e-11!26;UBERON:0000990!3.24e-11!26;UBERON:0003133!4.76e-11!24;UBERON:0000991!1.34e-09!18;UBERON:0005564!1.34e-09!18;UBERON:0004176!1.11e-08!17;UBERON:0009196!1.11e-08!17;UBERON:0009117!1.11e-08!17;UBERON:0005409!2.55e-08!59;UBERON:0000160!9.82e-08!43;UBERON:0003100!7.03e-07!11;UBERON:0003135!7.98e-07!15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,9.07e-28,26;UBERON:0000990,9.07e-28,26;UBERON:0003133,4.10e-26,24;UBERON:0000991,5.96e-26,18;UBERON:0005564,5.96e-26,18;UBERON:0004176,6.50e-23,17;UBERON:0009196,6.50e-23,17;UBERON:0009117,6.50e-23,17;UBERON:0000473,6.93e-15,14;UBERON:0003135,8.14e-14,15;UBERON:0000474,9.57e-14,9;UBERON:0002323,1.76e-13,37;UBERON:0004458,1.76e-13,37;UBERON:0003886,4.62e-13,38;UBERON:0003101,7.03e-13,16;UBERON:0000079,7.03e-13,16;UBERON:0002553,1.16e-12,39;UBERON:0003100,3.84e-11,11;UBERON:0000992,4.85e-11,3;UBERON:0003134,7.97e-11,8;UBERON:0000160,2.11e-09,31 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0.570070258369122,0.756090389279792,0,0,0,0,12.1317680295535,7.81302833184914,13.6793468695787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.608930956624282,0,0.753613202763113,0,0.125666591329675,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,2.24046600470696,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0.278047249225598,0,0,5.57295947091781,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.696710015581316,1.03093969057675,0.201683524623343,0.444756087689741,0.190225626112559,1.89811624617805,0.658795818896044,1.25667604400135,0.994782360205754,0.974820435595601,0.898819408654221,1.08069024937347,1.7922714592893,0,0.571242563048644,0,0.610953983535943,0.581857461502877,0.350679099451593,0.126473074248515,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0,0,0.318909537314974,0,0,0,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,1.13552068166615,3.02711526234334,2.60619134965722,5.27904393512113,0,0,0.302323556964751,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0.428674070063185,0,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.756037385752609,0,0.218362563746178,0.269728692769641,0.247960367176008,0,0.648074866458964,0,0,3.58839710505549,4.30192075188454,2.33341426012857,1.80823752868824,2.36538575687089,1.17357238645754,1.17183946359555,0.419437377702843,0,0,0,0.202725215290164,0,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.233753804363138,0.226730383615211,0,0,0,0.772758376128762,0.563047426353546,4.39563898241436,1.71494703263253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0.505394423527595,0,0,0,0.0640251524048693,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0.570070258369122,0.756090389279792,0,0,0,0,12.1317680295535,7.81302833184914,13.6793468695787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.608930956624282,0,0.753613202763113,0,0.125666591329675,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,2.24046600470696,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0.278047249225598,0,0,5.57295947091781,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.696710015581316,1.03093969057675,0.201683524623343,0.444756087689741,0.190225626112559,1.89811624617805,0.658795818896044,1.25667604400135,0.994782360205754,0.974820435595601,0.898819408654221,1.08069024937347,1.7922714592893,0,0.571242563048644,0,0.610953983535943,0.581857461502877,0.350679099451593,0.126473074248515,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0,0,0.318909537314974,0,0,0,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,1.13552068166615,3.02711526234334,2.60619134965722,5.27904393512113,0,0,0.302323556964751,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0.428674070063185,0,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.756037385752609,0,0.218362563746178,0.269728692769641,0.247960367176008,0,0.648074866458964,0,0,3.58839710505549,4.30192075188454,2.33341426012857,1.80823752868824,2.36538575687089,1.17357238645754,1.17183946359555,0.419437377702843,0,0,0,0.202725215290164,0,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.233753804363138,0.226730383615211,0,0,0,0.772758376128762,0.563047426353546,4.39563898241436,1.71494703263253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0.505394423527595,0,0,0,0.0640251524048693,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p1@2010009K17Rik | |short_description=p1@2010009K17Rik | ||
}} | }} |
Latest revision as of 00:59, 26 September 2015
Short description: | p1@2010009K17Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2010009K17Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | 40bp_to_NR_040609, uc008npq.1_5end |
EntrezGene: | 2010009K17Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 2.82e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 9.07e-28 | 26 |
reproductive system | 9.07e-28 | 26 |
reproductive organ | 4.10e-26 | 24 |
gonad | 5.96e-26 | 18 |
gonad primordium | 5.96e-26 | 18 |
external genitalia | 6.50e-23 | 17 |
indifferent external genitalia | 6.50e-23 | 17 |
indifferent gonad | 6.50e-23 | 17 |
testis | 6.93e-15 | 14 |
male reproductive organ | 8.14e-14 | 15 |
female reproductive system | 9.57e-14 | 9 |
body cavity | 1.76e-13 | 37 |
body cavity or lining | 1.76e-13 | 37 |
body cavity precursor | 4.62e-13 | 38 |
male organism | 7.03e-13 | 16 |
male reproductive system | 7.03e-13 | 16 |
anatomical cavity | 1.16e-12 | 39 |
female organism | 3.84e-11 | 11 |
female gonad | 4.85e-11 | 3 |
female reproductive organ | 7.97e-11 | 8 |
intestine | 2.11e-09 | 31 |