FFCP PHASE1:Mm9::chr1:94745202..94745249,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:94745202..94745249,+ | |||
|description=CAGE_peak_at_chr1:94745202..94745249,+ | |description=CAGE_peak_at_chr1:94745202..94745249,+ | ||
|id=chr1:94745202..94745249,+ | |id=chr1:94745202..94745249,+ | ||
|ontology_enrichment_celltype=CL:0000117!6.23e-15!23;CL:0000337!6.23e-15!23;CL:0000540!2.13e-11!33;CL:0000047!2.13e-11!33;CL:0000031!2.13e-11!33;CL:0000404!2.13e-11!33;CL:0000393!4.12e-08!39;CL:0000211!4.12e-08!39 | |ontology_enrichment_celltype=CL:0000117!6.23e-15!23;CL:0000337!6.23e-15!23;CL:0000540!2.13e-11!33;CL:0000047!2.13e-11!33;CL:0000031!2.13e-11!33;CL:0000404!2.13e-11!33;CL:0000393!4.12e-08!39;CL:0000211!4.12e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.81e-19,23;CL:0000337,7.81e-19,23;CL:0000540,3.68e-11,33;CL:0000047,3.68e-11,33;CL:0000031,3.68e-11,33;CL:0000404,3.68e-11,33;CL:0000393,1.62e-08,39;CL:0000211,1.62e-08,39;CL:0002319,3.40e-07,43;CL:0000221,6.63e-07,44;CL:0000133,6.63e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.86e-17!71;UBERON:0003075!1.86e-17!71;UBERON:0007284!1.86e-17!71;UBERON:0001017!7.56e-14!73;UBERON:0005743!7.56e-14!73;UBERON:0002020!7.82e-14!34;UBERON:0001049!8.86e-14!52;UBERON:0005068!8.86e-14!52;UBERON:0006241!8.86e-14!52;UBERON:0007135!8.86e-14!52;UBERON:0003056!1.06e-13!49;UBERON:0000033!2.47e-13!63;UBERON:0004121!3.66e-13!102;UBERON:0000924!3.66e-13!102;UBERON:0006601!3.66e-13!102;UBERON:0000073!5.47e-13!75;UBERON:0001016!5.47e-13!75;UBERON:0007811!2.80e-12!86;UBERON:0000153!3.04e-11!94;UBERON:0000955!3.13e-11!50;UBERON:0006238!3.13e-11!50;UBERON:0002616!5.14e-11!49;UBERON:0003080!5.69e-11!40;UBERON:0002780!2.57e-10!39;UBERON:0001890!2.57e-10!39;UBERON:0006240!2.57e-10!39;UBERON:0002791!6.82e-10!29;UBERON:0003528!6.82e-10!29;UBERON:0001893!6.82e-10!29 | |ontology_enrichment_uberon=UBERON:0002346!1.86e-17!71;UBERON:0003075!1.86e-17!71;UBERON:0007284!1.86e-17!71;UBERON:0001017!7.56e-14!73;UBERON:0005743!7.56e-14!73;UBERON:0002020!7.82e-14!34;UBERON:0001049!8.86e-14!52;UBERON:0005068!8.86e-14!52;UBERON:0006241!8.86e-14!52;UBERON:0007135!8.86e-14!52;UBERON:0003056!1.06e-13!49;UBERON:0000033!2.47e-13!63;UBERON:0004121!3.66e-13!102;UBERON:0000924!3.66e-13!102;UBERON:0006601!3.66e-13!102;UBERON:0000073!5.47e-13!75;UBERON:0001016!5.47e-13!75;UBERON:0007811!2.80e-12!86;UBERON:0000153!3.04e-11!94;UBERON:0000955!3.13e-11!50;UBERON:0006238!3.13e-11!50;UBERON:0002616!5.14e-11!49;UBERON:0003080!5.69e-11!40;UBERON:0002780!2.57e-10!39;UBERON:0001890!2.57e-10!39;UBERON:0006240!2.57e-10!39;UBERON:0002791!6.82e-10!29;UBERON:0003528!6.82e-10!29;UBERON:0001893!6.82e-10!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.57e-16,34;UBERON:0002346,9.49e-15,64;UBERON:0003075,9.49e-15,64;UBERON:0007284,9.49e-15,64;UBERON:0000073,1.65e-14,54;UBERON:0001049,2.14e-13,52;UBERON:0005068,2.14e-13,52;UBERON:0006241,2.14e-13,52;UBERON:0007135,2.14e-13,52;UBERON:0003056,5.97e-12,49;UBERON:0010371,1.21e-11,73;UBERON:0001017,2.75e-11,73;UBERON:0003528,4.53e-11,29;UBERON:0002791,4.53e-11,29;UBERON:0001893,4.53e-11,29;UBERON:0001016,1.02e-10,75;UBERON:0004121,2.36e-10,95;UBERON:0000924,2.36e-10,95;UBERON:0006601,2.36e-10,95;UBERON:0003080,1.56e-09,40;UBERON:0002616,2.53e-09,46;UBERON:0000955,5.58e-09,47;UBERON:0006238,5.58e-09,47;UBERON:0002780,9.66e-09,39;UBERON:0001890,9.66e-09,39;UBERON:0006240,9.66e-09,39;UBERON:0001948,4.12e-08,5;UBERON:0002315,4.12e-08,5;UBERON:0000956,6.25e-08,21;UBERON:0001869,6.25e-08,21;UBERON:0000203,6.25e-08,21;UBERON:0010314,3.09e-07,92 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,6.34789175126439,6.33831403506179,0,0,0,0,0,0,0,1.65903379693564,1.75507719831198,1.47227472945967,9.42648248532552,10.8225585066291,2.57230678351403,1.91690942036473,1.83843757322004,1.10115880999389,1.40456071893706,0.614426133024974,8.17694983927202,7.13603620098795,8.85552729946492,0,2.25105044012672,0.45839474333043,9.42811473515737,6.97621235915604,12.6751623161204,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.587943535678524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14560342750128,0.915001205637253,17.8429180000267,1.21677024134594,1.02286182932132,1.45451631191692,2.27137768294861,0.101839363850316,0,0,0,0.130120442962704,1.37941262660084,1.26043490863744,1.65775299619287,2.04109497453984,1.5373646434182,1.49922759295566,0.776110112217047,0,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,7.9236551532049,0,0,0.213288250535234,0,0.38660238396628,0.403367049246685,0,0.570676878337677,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,3.04750385139728,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0,0,0.388076051348264,0,0.354680467284547,0.178368817602071,0.822745103010605,0.608929898229199,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.540026704109006,0,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,1.43795340030758,1.94881234466693,0.716106782669926,1.19208812868759,0.961563596159751,0.590758108698309,0.100966449948148,0.762068066549998,0.302478555410522,0.292373642219257,0.288635524920988,0,0,0,0,0,0,0,0,0,0,4.51801474093653,3.68260189205742,5.72895513439397,1.54667864109319,0,0.755393897389701,0,0.900642406448441,1.81256963593682,0,0,1.19707462020309,1.70733605754134,1.70174701947806,1.67690530102386,1.2869045591501,2.00022055021454,2.47242068686673,2.56735367673452,1.01078884705519,1.77435509923168,2.82939512079114,1.87283014939765,2.68905640100451,2.01024141344646,1.90517476513229,1.97003354106254,1.35036454324594,1.64834360321323,1.76638704161277,1.37147700954166,1.77475806159337,1.43061713968393,1.45346416632329,1.69396884747595,1.77690676572521,1.64635175585495,2.89376682581627,1.35804113845862,1.12228454331548,2.25406534435931,1.97008964751127,1.22769312950907,2.32405261778949,2.3148793317737,3.49734809113124,1.63752125911786,2.36358159453128,0.765153328275374,0.441182838239031,0 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|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,6.34789175126439,6.33831403506179,0,0,0,0,0,0,0,1.65903379693564,1.75507719831198,1.47227472945967,9.42648248532552,10.8225585066291,2.57230678351403,1.91690942036473,1.83843757322004,1.10115880999389,1.40456071893706,0.614426133024974,8.17694983927202,7.13603620098795,8.85552729946492,0,2.25105044012672,0.45839474333043,9.42811473515737,6.97621235915604,12.6751623161204,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.587943535678524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14560342750128,0.915001205637253,17.8429180000267,1.21677024134594,1.02286182932132,1.45451631191692,2.27137768294861,0.101839363850316,0,0,0,0.130120442962704,1.37941262660084,1.26043490863744,1.65775299619287,2.04109497453984,1.5373646434182,1.49922759295566,0.776110112217047,0,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,7.9236551532049,0,0,0.213288250535234,0,0.38660238396628,0.403367049246685,0,0.570676878337677,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,3.04750385139728,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0,0,0.388076051348264,0,0.354680467284547,0.178368817602071,0.822745103010605,0.608929898229199,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.540026704109006,0,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,1.43795340030758,1.94881234466693,0.716106782669926,1.19208812868759,0.961563596159751,0.590758108698309,0.100966449948148,0.762068066549998,0.302478555410522,0.292373642219257,0.288635524920988,0,0,0,0,0,0,0,0,0,0,4.51801474093653,3.68260189205742,5.72895513439397,1.54667864109319,0,0.755393897389701,0,0.900642406448441,1.81256963593682,0,0,1.19707462020309,1.70733605754134,1.70174701947806,1.67690530102386,1.2869045591501,2.00022055021454,2.47242068686673,2.56735367673452,1.01078884705519,1.77435509923168,2.82939512079114,1.87283014939765,2.68905640100451,2.01024141344646,1.90517476513229,1.97003354106254,1.35036454324594,1.64834360321323,1.76638704161277,1.37147700954166,1.77475806159337,1.43061713968393,1.45346416632329,1.69396884747595,1.77690676572521,1.64635175585495,2.89376682581627,1.35804113845862,1.12228454331548,2.25406534435931,1.97008964751127,1.22769312950907,2.32405261778949,2.3148793317737,3.49734809113124,1.63752125911786,2.36358159453128,0.765153328275374,0.441182838239031,0 | ||
|short_description=p@chr1:94745202..94745249,+ | |short_description=p@chr1:94745202..94745249,+ | ||
}} | }} |
Latest revision as of 05:27, 6 August 2015
Short description: | p@chr1:94745202..94745249, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:94745202..94745249, + |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.81e-19 | 23 |
neuroblast (sensu Vertebrata) | 7.81e-19 | 23 |
neuron | 3.68e-11 | 33 |
neuronal stem cell | 3.68e-11 | 33 |
neuroblast | 3.68e-11 | 33 |
electrically signaling cell | 3.68e-11 | 33 |
electrically responsive cell | 1.62e-08 | 39 |
electrically active cell | 1.62e-08 | 39 |
neural cell | 3.40e-07 | 43 |
ectodermal cell | 6.63e-07 | 44 |
neurectodermal cell | 6.63e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.57e-16 | 34 |
neurectoderm | 9.49e-15 | 64 |
neural plate | 9.49e-15 | 64 |
presumptive neural plate | 9.49e-15 | 64 |
regional part of nervous system | 1.65e-14 | 54 |
neural tube | 2.14e-13 | 52 |
neural rod | 2.14e-13 | 52 |
future spinal cord | 2.14e-13 | 52 |
neural keel | 2.14e-13 | 52 |
pre-chordal neural plate | 5.97e-12 | 49 |
ecto-epithelium | 1.21e-11 | 73 |
central nervous system | 2.75e-11 | 73 |
brain grey matter | 4.53e-11 | 29 |
regional part of telencephalon | 4.53e-11 | 29 |
telencephalon | 4.53e-11 | 29 |
nervous system | 1.02e-10 | 75 |
ectoderm-derived structure | 2.36e-10 | 95 |
ectoderm | 2.36e-10 | 95 |
presumptive ectoderm | 2.36e-10 | 95 |
anterior neural tube | 1.56e-09 | 40 |
regional part of brain | 2.53e-09 | 46 |
brain | 5.58e-09 | 47 |
future brain | 5.58e-09 | 47 |
regional part of forebrain | 9.66e-09 | 39 |
forebrain | 9.66e-09 | 39 |
future forebrain | 9.66e-09 | 39 |
regional part of spinal cord | 4.12e-08 | 5 |
gray matter of spinal cord | 4.12e-08 | 5 |
cerebral cortex | 6.25e-08 | 21 |
cerebral hemisphere | 6.25e-08 | 21 |
pallium | 6.25e-08 | 21 |
structure with developmental contribution from neural crest | 3.09e-07 | 92 |