Personal tools

FFCP PHASE1:Mm9::chr8:39724506..39724535,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=244431
|EntrezGene=244431
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BX51,D6RFA5
|UniProt=Q8BX51,D6RFA5
|association_with_transcript=26bp_to_ENSMUST00000118896,ENSMUST00000135764,NM_145841,uc009lme.2_5end
|association_with_transcript=26bp_to_ENSMUST00000118896,ENSMUST00000135764,NM_145841,uc009lme.2_5end
|cluster_id=chr8:39724506..39724535,-
|description=CAGE_peak_1_at_Sgcz_5end
|description=CAGE_peak_1_at_Sgcz_5end
|id=chr8:39724506..39724535,-
|id=chr8:39724506..39724535,-
|ontology_enrichment_celltype=CL:0000117!1.73e-09!23;CL:0000337!1.73e-09!23
|ontology_enrichment_celltype=CL:0000117!1.73e-09!23;CL:0000337!1.73e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,6.72e-16,23;CL:0000337,6.72e-16,23;CL:0000540,8.24e-10,33;CL:0000047,8.24e-10,33;CL:0000031,8.24e-10,33;CL:0000404,8.24e-10,33;CL:0000393,1.08e-07,39;CL:0000211,1.08e-07,39;CL:0002612,9.25e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.77e-18!52;UBERON:0005068!2.77e-18!52;UBERON:0006241!2.77e-18!52;UBERON:0007135!2.77e-18!52;UBERON:0000033!6.34e-18!63;UBERON:0002346!1.69e-17!71;UBERON:0003075!1.69e-17!71;UBERON:0007284!1.69e-17!71;UBERON:0000955!1.44e-16!50;UBERON:0006238!1.44e-16!50;UBERON:0001017!2.88e-16!73;UBERON:0005743!2.88e-16!73;UBERON:0002616!7.22e-16!49;UBERON:0003056!3.13e-15!49;UBERON:0000073!3.16e-15!75;UBERON:0001016!3.16e-15!75;UBERON:0002020!2.75e-14!34;UBERON:0003080!5.14e-13!40;UBERON:0004121!6.25e-13!102;UBERON:0000924!6.25e-13!102;UBERON:0006601!6.25e-13!102;UBERON:0002780!2.69e-12!39;UBERON:0001890!2.69e-12!39;UBERON:0006240!2.69e-12!39;UBERON:0002791!1.04e-10!29;UBERON:0003528!1.04e-10!29;UBERON:0001893!1.04e-10!29;UBERON:0000153!7.05e-09!94;UBERON:0007811!9.74e-09!86;UBERON:0002021!1.92e-08!10;UBERON:0000411!1.92e-08!10;UBERON:0001950!1.92e-08!10;UBERON:0002619!3.46e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.93e-31,54;UBERON:0001017,5.41e-29,73;UBERON:0001049,1.17e-28,52;UBERON:0005068,1.17e-28,52;UBERON:0006241,1.17e-28,52;UBERON:0007135,1.17e-28,52;UBERON:0001016,6.08e-28,75;UBERON:0002020,1.53e-23,34;UBERON:0002346,4.56e-23,64;UBERON:0003075,4.56e-23,64;UBERON:0007284,4.56e-23,64;UBERON:0000955,1.64e-21,47;UBERON:0006238,1.64e-21,47;UBERON:0004121,4.37e-21,95;UBERON:0000924,4.37e-21,95;UBERON:0006601,4.37e-21,95;UBERON:0002616,3.37e-20,46;UBERON:0010371,4.22e-19,73;UBERON:0003080,2.11e-18,40;UBERON:0002780,5.01e-17,39;UBERON:0001890,5.01e-17,39;UBERON:0006240,5.01e-17,39;UBERON:0003528,2.91e-16,29;UBERON:0002791,2.91e-16,29;UBERON:0001893,2.91e-16,29;UBERON:0003056,3.91e-15,49;UBERON:0002021,1.71e-14,10;UBERON:0000411,1.71e-14,10;UBERON:0001950,1.71e-14,10;UBERON:0010314,2.60e-13,92;UBERON:0002240,2.54e-11,6;UBERON:0005174,2.54e-11,6;UBERON:0001137,2.54e-11,6;UBERON:0003076,4.01e-11,12;UBERON:0003057,4.01e-11,12;UBERON:0000025,6.62e-10,114;UBERON:0001948,8.56e-10,5;UBERON:0002315,8.56e-10,5;UBERON:0002420,1.02e-09,8;UBERON:0007245,1.02e-09,8;UBERON:0010009,1.02e-09,8;UBERON:0010011,1.02e-09,8;UBERON:0000454,1.02e-09,8;UBERON:0002619,2.50e-09,17;UBERON:0000956,8.48e-09,21;UBERON:0001869,8.48e-09,21;UBERON:0000203,8.48e-09,21;UBERON:0004111,1.09e-08,122;UBERON:0002950,1.68e-07,4;UBERON:0001891,1.68e-07,4;UBERON:0009616,1.68e-07,4;UBERON:0010286,1.68e-07,4;UBERON:0002257,9.25e-07,3
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,2.63011399117477,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,0.103689612308478,0,0,4.85606673486466,2.87129103237098,0.61245399607477,0.479227355091182,0,2.20231761998777,3.70293280447044,2.91852413186863,1.58263545276233,2.8361169516747,0.52091337055676,3.35019598801657,3.37657566019008,2.44477196442896,5.30331453852602,7.26095572075425,4.65998614563251,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0,0,0.461230994512117,0,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,5.84183493678809,4.11750542536764,2.89005009859588,6.08385120672968,6.90431734791892,3.74018480207208,5.353961681236,0.203678727700633,0,0,0.210441855886474,0.650602214813519,1.14951052216736,0.360124259610698,0.60281927134286,0.204109497453984,0.2562274405697,0.562210347358373,0.776110112217047,0,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,0,0.411564272815887,0.398068533636986,0,0,0,0,0,0.540186184383045,0.473489471170421,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,2.10289948564127,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.610953983535943,0.193952487167626,0.210407459670956,0.252946148497029,0.295220295959204,0.784993639206874,0.246794327843601,0,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,1.43768206527355,0.744281895337007,1.5601883655728,0.757736633841335,0.538192240565737,0,0,0.568474235311454,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.85321415970701,4.45404409050372,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,4.17717711348349,0,0.178065603667255,0.977321756121456,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0,1.07168517515796,0.532020700926821,0.535106452806212,1.81003922662333,0,0,0,0,0,0.161464426695906,0,0,0,0,4.07935664423121,0.341741761595705,0,0,0,0,0,0,0,0,0,0.949007980743406,1.21991680276109,0.324016022465404,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.410843828659309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.772758376128762,0,0.183151624267265,0,0,2.25900737046827,6.90487854760765,0.572895513439397,4.81188910562325,4.7955776383945,5.2877572817279,4.05013500139084,6.75481804836331,6.34399372577886,4.65984280576638,0.103787347584177,0.399024873401031,1.36586884603307,0.972426868273176,0.209613162627982,0,0.888986911206461,0.824140228955577,0.962757628775446,0.758091635291392,0.760437899670719,0.754505365544305,0.749132059759059,1.02440243847791,0.746661096422973,0.476293691283074,0.811190281613988,0.77163688185482,1.23625770240992,1.03039244094078,2.40008476669791,1.24233064311536,1.1921809497366,0.726732083161643,0.846984423737976,1.18460451048347,0.548783918618318,0.263069711437843,1.22223702461276,1.12228454331548,0.830445126869219,0.689531376628944,0,0.619747364743864,0.771626443924566,0.499621155875892,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,2.63011399117477,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,0.103689612308478,0,0,4.85606673486466,2.87129103237098,0.61245399607477,0.479227355091182,0,2.20231761998777,3.70293280447044,2.91852413186863,1.58263545276233,2.8361169516747,0.52091337055676,3.35019598801657,3.37657566019008,2.44477196442896,5.30331453852602,7.26095572075425,4.65998614563251,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0,0,0.461230994512117,0,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,5.84183493678809,4.11750542536764,2.89005009859588,6.08385120672968,6.90431734791892,3.74018480207208,5.353961681236,0.203678727700633,0,0,0.210441855886474,0.650602214813519,1.14951052216736,0.360124259610698,0.60281927134286,0.204109497453984,0.2562274405697,0.562210347358373,0.776110112217047,0,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,0,0.411564272815887,0.398068533636986,0,0,0,0,0,0.540186184383045,0.473489471170421,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,2.10289948564127,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.610953983535943,0.193952487167626,0.210407459670956,0.252946148497029,0.295220295959204,0.784993639206874,0.246794327843601,0,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,1.43768206527355,0.744281895337007,1.5601883655728,0.757736633841335,0.538192240565737,0,0,0.568474235311454,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.85321415970701,4.45404409050372,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,4.17717711348349,0,0.178065603667255,0.977321756121456,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0,1.07168517515796,0.532020700926821,0.535106452806212,1.81003922662333,0,0,0,0,0,0.161464426695906,0,0,0,0,4.07935664423121,0.341741761595705,0,0,0,0,0,0,0,0,0,0.949007980743406,1.21991680276109,0.324016022465404,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.410843828659309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.772758376128762,0,0.183151624267265,0,0,2.25900737046827,6.90487854760765,0.572895513439397,4.81188910562325,4.7955776383945,5.2877572817279,4.05013500139084,6.75481804836331,6.34399372577886,4.65984280576638,0.103787347584177,0.399024873401031,1.36586884603307,0.972426868273176,0.209613162627982,0,0.888986911206461,0.824140228955577,0.962757628775446,0.758091635291392,0.760437899670719,0.754505365544305,0.749132059759059,1.02440243847791,0.746661096422973,0.476293691283074,0.811190281613988,0.77163688185482,1.23625770240992,1.03039244094078,2.40008476669791,1.24233064311536,1.1921809497366,0.726732083161643,0.846984423737976,1.18460451048347,0.548783918618318,0.263069711437843,1.22223702461276,1.12228454331548,0.830445126869219,0.689531376628944,0,0.619747364743864,0.771626443924566,0.499621155875892,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0.231867835620421
|short_description=p1@Sgcz
|short_description=p1@Sgcz
}}
}}

Latest revision as of 23:24, 1 October 2015

Short description:p1@Sgcz
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sgcz_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 26bp_to_ENSMUST00000118896, ENSMUST00000135764, NM_145841, uc009lme.2_5end
EntrezGene:Sgcz
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sgcz

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.93e-3154
central nervous system5.41e-2973
neural tube1.17e-2852
neural rod1.17e-2852
future spinal cord1.17e-2852
neural keel1.17e-2852
nervous system6.08e-2875
gray matter1.53e-2334
neurectoderm4.56e-2364
neural plate4.56e-2364
presumptive neural plate4.56e-2364
brain1.64e-2147
future brain1.64e-2147
ectoderm-derived structure4.37e-2195
ectoderm4.37e-2195
presumptive ectoderm4.37e-2195
regional part of brain3.37e-2046
ecto-epithelium4.22e-1973
anterior neural tube2.11e-1840
regional part of forebrain5.01e-1739
forebrain5.01e-1739
future forebrain5.01e-1739
brain grey matter2.91e-1629
regional part of telencephalon2.91e-1629
telencephalon2.91e-1629
pre-chordal neural plate3.91e-1549
occipital lobe1.71e-1410
visual cortex1.71e-1410
neocortex1.71e-1410
structure with developmental contribution from neural crest2.60e-1392
spinal cord2.54e-116
dorsal region element2.54e-116
dorsum2.54e-116
posterior neural tube4.01e-1112
chordal neural plate4.01e-1112
tube6.62e-10114
regional part of spinal cord8.56e-105
gray matter of spinal cord8.56e-105
basal ganglion1.02e-098
nuclear complex of neuraxis1.02e-098
aggregate regional part of brain1.02e-098
collection of basal ganglia1.02e-098
cerebral subcortex1.02e-098
regional part of cerebral cortex2.50e-0917
cerebral cortex8.48e-0921
cerebral hemisphere8.48e-0921
pallium8.48e-0921
anatomical conduit1.09e-08122
regional part of midbrain1.68e-074
midbrain1.68e-074
presumptive midbrain1.68e-074
midbrain neural tube1.68e-074
ventral horn of spinal cord9.25e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:39724506..39724535,-&oldid=4327810"