FFCP PHASE1:Mm9::chr8:13351743..13351770,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:13351743..13351770,+ | |||
|description=CAGE_peak_at_chr8:13351743..13351770,+ | |description=CAGE_peak_at_chr8:13351743..13351770,+ | ||
|id=chr8:13351743..13351770,+ | |id=chr8:13351743..13351770,+ | ||
|ontology_enrichment_celltype=CL:0000473!3.34e-12!3;CL:0000627!3.34e-12!3;CL:0000682!3.34e-12!3;CL:0000239!3.89e-10!6;CL:0000677!3.89e-10!6;CL:0000212!3.89e-10!6;CL:0000584!3.89e-10!6;CL:0000075!1.08e-08!7;CL:0002563!9.19e-07!9;CL:0002251!9.19e-07!9 | |ontology_enrichment_celltype=CL:0000473!3.34e-12!3;CL:0000627!3.34e-12!3;CL:0000682!3.34e-12!3;CL:0000239!3.89e-10!6;CL:0000677!3.89e-10!6;CL:0000212!3.89e-10!6;CL:0000584!3.89e-10!6;CL:0000075!1.08e-08!7;CL:0002563!9.19e-07!9;CL:0002251!9.19e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.69e-23,3;CL:0000239,6.62e-20,6;CL:0000677,6.62e-20,6;CL:0000584,6.62e-20,6;CL:0000075,4.06e-17,7;CL:0000066,3.07e-14,25;CL:0002563,2.16e-13,9;CL:0002251,2.16e-13,9;CL:0000473,1.96e-10,7;CL:0002076,3.82e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.65e-19!23;UBERON:0000974!5.65e-19!23;UBERON:0004807!5.65e-19!23;UBERON:0005058!5.65e-19!23;UBERON:0003351!5.65e-19!23;UBERON:0009113!5.65e-19!23;UBERON:0003295!5.65e-19!23;UBERON:0009722!5.65e-19!23;UBERON:0005562!5.65e-19!23;UBERON:0007690!5.65e-19!23;UBERON:0006562!4.30e-18!24;UBERON:0003408!4.30e-18!24;UBERON:0001557!4.30e-18!24;UBERON:0001042!4.30e-18!24;UBERON:0008814!4.30e-18!24;UBERON:0009145!4.30e-18!24;UBERON:0000072!7.71e-16!27;UBERON:0003929!7.49e-15!55;UBERON:0004177!1.35e-14!29;UBERON:0000490!7.95e-12!66;UBERON:0000063!1.02e-11!35;UBERON:0000344!2.61e-11!15;UBERON:0002193!2.79e-11!48;UBERON:0005911!3.62e-11!69;UBERON:0000065!1.10e-09!41;UBERON:0001004!2.11e-09!42;UBERON:0000064!3.66e-09!99;UBERON:0005057!1.02e-08!51;UBERON:0002390!1.25e-08!45;UBERON:0003061!1.25e-08!45;UBERON:0001962!3.41e-08!2;UBERON:0001961!3.41e-08!2;UBERON:0001744!3.41e-08!2;UBERON:0001007!4.50e-08!128;UBERON:0001555!4.50e-08!128;UBERON:0007026!4.50e-08!128;UBERON:0002405!4.78e-08!70;UBERON:0004119!6.91e-08!130;UBERON:0000925!6.91e-08!130;UBERON:0006595!6.91e-08!130;UBERON:0002368!4.69e-07!60;UBERON:0001242!5.23e-07!13;UBERON:0000060!5.23e-07!13;UBERON:0001262!5.23e-07!13;UBERON:0004786!5.23e-07!13;UBERON:0003350!9.19e-07!9;UBERON:0004808!9.19e-07!9;UBERON:0001277!9.19e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.61e-23,15;UBERON:0001962,3.12e-15,2;UBERON:0001961,3.12e-15,2;UBERON:0001744,3.12e-15,2;UBERON:0004923,1.42e-14,24;UBERON:0001242,2.62e-14,13;UBERON:0001262,2.62e-14,13;UBERON:0004786,2.62e-14,13;UBERON:0003350,2.16e-13,9;UBERON:0004808,2.16e-13,9;UBERON:0001277,2.16e-13,9;UBERON:0000485,5.18e-11,11;UBERON:0002465,1.77e-10,3;UBERON:0003199,1.74e-08,1 | |||
|phase1_expression=0,5.58360652222978,7.27998783023258,0,0,4.70061961353291,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.07990149631429,3.89995777814189,9.18771142584032,8.61523992318149,18.0995835456147,0,0,13.082100128663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0,0.51968329191118,0.716106782669926,0.39736270956253,0.600977247599844,0.590758108698309,0.605798699688886,0.533447646584999,0.705783295957884,1.26695244961678,0.769694733122636,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,5.58360652222978,7.27998783023258,0,0,4.70061961353291,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.07990149631429,3.89995777814189,9.18771142584032,8.61523992318149,18.0995835456147,0,0,13.082100128663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0,0.51968329191118,0.716106782669926,0.39736270956253,0.600977247599844,0.590758108698309,0.605798699688886,0.533447646584999,0.705783295957884,1.26695244961678,0.769694733122636,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:13351743..13351770,+ | |short_description=p@chr8:13351743..13351770,+ | ||
}} | }} |
Latest revision as of 04:56, 6 August 2015
Short description: | p@chr8:13351743..13351770, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:13351743..13351770, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.69e-23 | 3 |
brush border epithelial cell | 6.62e-20 | 6 |
gut absorptive cell | 6.62e-20 | 6 |
enterocyte | 6.62e-20 | 6 |
columnar/cuboidal epithelial cell | 4.06e-17 | 7 |
epithelial cell | 3.07e-14 | 25 |
intestinal epithelial cell | 2.16e-13 | 9 |
epithelial cell of alimentary canal | 2.16e-13 | 9 |
defensive cell | 1.96e-10 | 7 |
endo-epithelial cell | 3.82e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.61e-23 | 15 |
gut-associated lymphoid tissue | 3.12e-15 | 2 |
mucosa-associated lymphoid tissue | 3.12e-15 | 2 |
lymphoid tissue | 3.12e-15 | 2 |
organ component layer | 1.42e-14 | 24 |
intestinal mucosa | 2.62e-14 | 13 |
wall of intestine | 2.62e-14 | 13 |
gastrointestinal system mucosa | 2.62e-14 | 13 |
epithelium of mucosa | 2.16e-13 | 9 |
gastrointestinal system epithelium | 2.16e-13 | 9 |
intestinal epithelium | 2.16e-13 | 9 |
simple columnar epithelium | 5.18e-11 | 11 |
lymphoid system | 1.77e-10 | 3 |
egg chamber | 1.74e-08 | 1 |