FFCP PHASE1:Mm9::chr19:55972753..55972764,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21416 | |EntrezGene=21416 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-34bp_to_ENSMUST00000143334_5end | |association_with_transcript=-34bp_to_ENSMUST00000143334_5end | ||
|cluster_id=chr19:55972753..55972764,+ | |||
|description=CAGE_peak_33_at_Tcf7l2_5end | |description=CAGE_peak_33_at_Tcf7l2_5end | ||
|id=chr19:55972753..55972764,+ | |id=chr19:55972753..55972764,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.53e-27,3;CL:0002613,1.91e-26,3;CL:0000117,1.19e-13,23;CL:0000337,1.19e-13,23;CL:0000540,1.75e-09,33;CL:0000047,1.75e-09,33;CL:0000031,1.75e-09,33;CL:0000404,1.75e-09,33;CL:0000393,5.33e-08,39;CL:0000211,5.33e-08,39;CL:0002319,3.08e-07,43;CL:0000221,4.55e-07,44;CL:0000133,4.55e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!1.83e-07!5;UBERON:0002435!1.83e-07!5;UBERON:0000204!1.83e-07!5;UBERON:0010082!1.83e-07!5 | |ontology_enrichment_uberon=UBERON:0000369!1.83e-07!5;UBERON:0002435!1.83e-07!5;UBERON:0000204!1.83e-07!5;UBERON:0010082!1.83e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.53e-27,3;UBERON:0002275,2.53e-27,3;UBERON:0000369,3.58e-16,5;UBERON:0002435,3.58e-16,5;UBERON:0000204,3.58e-16,5;UBERON:0010082,3.58e-16,5;UBERON:0000073,8.20e-13,54;UBERON:0002259,1.63e-10,1;UBERON:0002314,1.63e-10,1;UBERON:0004061,1.63e-10,1;UBERON:0006777,1.63e-10,1;UBERON:0005882,1.63e-10,1;UBERON:0002420,2.34e-10,8;UBERON:0007245,2.34e-10,8;UBERON:0010009,2.34e-10,8;UBERON:0010011,2.34e-10,8;UBERON:0000454,2.34e-10,8;UBERON:0001017,2.40e-09,73;UBERON:0001016,4.41e-09,75;UBERON:0003080,8.29e-08,40;UBERON:0004121,4.82e-07,95;UBERON:0000924,4.82e-07,95;UBERON:0006601,4.82e-07,95;UBERON:0002616,9.19e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30347642998166,3.19218345212969,2.76491759861238,1.97829431595291,2.56165402086747,2.6045668527838,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,3.74476598512057,0.457500602818626,0.125654352112864,0,0,3.53239675751252,2.10913641988085,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604647113929502,0.943025398779491,0.885905678642318,0.614870295887855,0.258428293168221,0.727067458955011,1.78248689192361,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.627264888043406,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.565879024158229,0,0.384150914429216,0.17230640686684,0.476293691283074,0.579421629724277,0.38581844092741,0,0.735994600671987,0.342869252385415,0,0.476872379894642,0.290692833264657,0,0.338458431566706,0.182927972872773,0.263069711437843,0.407412341537585,0,0.118635018124174,0.197008964751127,0.409231043169689,0.309873682371932,0.771626443924566,0.999242311751784,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30347642998166,3.19218345212969,2.76491759861238,1.97829431595291,2.56165402086747,2.6045668527838,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,3.74476598512057,0.457500602818626,0.125654352112864,0,0,3.53239675751252,2.10913641988085,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604647113929502,0.943025398779491,0.885905678642318,0.614870295887855,0.258428293168221,0.727067458955011,1.78248689192361,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.627264888043406,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.565879024158229,0,0.384150914429216,0.17230640686684,0.476293691283074,0.579421629724277,0.38581844092741,0,0.735994600671987,0.342869252385415,0,0.476872379894642,0.290692833264657,0,0.338458431566706,0.182927972872773,0.263069711437843,0.407412341537585,0,0.118635018124174,0.197008964751127,0.409231043169689,0.309873682371932,0.771626443924566,0.999242311751784,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0 | ||
|short_description=p33@Tcf7l2 | |short_description=p33@Tcf7l2 | ||
}} | }} |
Latest revision as of 23:59, 25 September 2015
Short description: | p33@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_33_at_Tcf7l2_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_ENSMUST00000143334_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.53e-27 | 3 |
striatum neuron | 1.91e-26 | 3 |
CNS neuron (sensu Vertebrata) | 1.19e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.19e-13 | 23 |
neuron | 1.75e-09 | 33 |
neuronal stem cell | 1.75e-09 | 33 |
neuroblast | 1.75e-09 | 33 |
electrically signaling cell | 1.75e-09 | 33 |
electrically responsive cell | 5.33e-08 | 39 |
electrically active cell | 5.33e-08 | 39 |
neural cell | 3.08e-07 | 43 |
ectodermal cell | 4.55e-07 | 44 |
neurectodermal cell | 4.55e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.53e-27 | 3 |
reticular formation | 2.53e-27 | 3 |
corpus striatum | 3.58e-16 | 5 |
striatum | 3.58e-16 | 5 |
ventral part of telencephalon | 3.58e-16 | 5 |
future corpus striatum | 3.58e-16 | 5 |
regional part of nervous system | 8.20e-13 | 54 |
corpora quadrigemina | 1.63e-10 | 1 |
midbrain tectum | 1.63e-10 | 1 |
neural tube mantle layer | 1.63e-10 | 1 |
tectal plate | 1.63e-10 | 1 |
neural tube alar plate | 1.63e-10 | 1 |
basal ganglion | 2.34e-10 | 8 |
nuclear complex of neuraxis | 2.34e-10 | 8 |
aggregate regional part of brain | 2.34e-10 | 8 |
collection of basal ganglia | 2.34e-10 | 8 |
cerebral subcortex | 2.34e-10 | 8 |
central nervous system | 2.40e-09 | 73 |
nervous system | 4.41e-09 | 75 |
anterior neural tube | 8.29e-08 | 40 |
ectoderm-derived structure | 4.82e-07 | 95 |
ectoderm | 4.82e-07 | 95 |
presumptive ectoderm | 4.82e-07 | 95 |
regional part of brain | 9.19e-07 | 46 |