FFCP PHASE1:Mm9::chr9:78078486..78078498,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14857 | |EntrezGene=14857 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=54 | |||
|TSSclassifier=NA | |||
|UniProt=P13745,Q8K0V9 | |UniProt=P13745,Q8K0V9 | ||
|association_with_transcript=10bp_to_NM_008181,uc009qtz.1,uc009qua.1_5end | |association_with_transcript=10bp_to_NM_008181,uc009qtz.1,uc009qua.1_5end | ||
|cluster_id=chr9:78078486..78078498,+ | |||
|description=CAGE_peak_1_at_Gsta1_5end | |description=CAGE_peak_1_at_Gsta1_5end | ||
|id=chr9:78078486..78078498,+ | |id=chr9:78078486..78078498,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.67e-08,3;CL:0002202,3.67e-08,3;CL:0000069,3.67e-08,3;CL:0002632,3.67e-08,3;CL:0002368,3.67e-08,3;CL:0000307,3.67e-08,3;CL:0000377,3.67e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.24e-12!59;UBERON:0001007!5.92e-09!128;UBERON:0001555!5.92e-09!128;UBERON:0007026!5.92e-09!128;UBERON:0004119!1.39e-08!130;UBERON:0000925!1.39e-08!130;UBERON:0006595!1.39e-08!130;UBERON:0004921!4.31e-08!126;UBERON:0004185!4.31e-08!126;UBERON:0000160!9.40e-07!43;UBERON:0000945!9.92e-07!16;UBERON:0010039!9.92e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.44e-22,47;UBERON:0004921,2.09e-16,114;UBERON:0001007,5.27e-16,116;UBERON:0001555,5.27e-16,116;UBERON:0007026,5.27e-16,116;UBERON:0004119,1.29e-15,118;UBERON:0000925,1.29e-15,118;UBERON:0006595,1.29e-15,118;UBERON:0000160,3.00e-13,31;UBERON:0000945,2.03e-09,16;UBERON:0010039,2.03e-09,16;UBERON:0003126,3.67e-08,3;UBERON:0001005,3.67e-08,3;UBERON:0007196,3.67e-08,3;UBERON:0001558,3.67e-08,3;UBERON:0011216,8.70e-07,194 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.91763712426868,0,0,0,0,0,0,0,0,0,0.288851619751275,4.48833542467929,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94932925234301,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,4.5463118612355,7.09407623330276,6.0662933401774,0,0,0,0,0,0,0,0,0.628332956648377,0,0,0,0,0,0,160.296914647585,0,0,55.4341809802643,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631325567659422,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,244.840318190994,0,0,0.232236671860439,0.38660238396628,3.83198696784351,1.11189021922435,3.04361001780095,32.7425052465713,8.23494773620054,0.502670417600539,1.1937388322469,0.38992817423824,22.4704852163555,60.9509300646638,75.8728251099139,0,0,0,0,0,0.841629838683823,0,0.590440591918409,0.784993639206874,1.35736880313981,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,1.97337154874103,4.82443521363367,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,1.47476983244164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,1.45317984026315,0.542816324353403,0.238744688006273,0,15.1570035047522,0,0,0.412773735926445,0,0,0,0,0,0,0,701.682904241108,0.158167996790568,0.813277868507395,6.04829908602087,14.0089158329694,29.2605835419878,41.9428117256792,36.6154808863238,309.657279367107,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0,0,3.62768613784338,0,0,0,0.19318959403219,0,0,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0.565879024158229,0.280924522409647,0.128050304809739,0.114870937911227,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.715308569841963,0.290692833264657,0.752875043322645,0.25384382367503,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,1.15743966588685,0,0.467863216890817,1.50409737833809,0.191288332068843,0,0 | |phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.91763712426868,0,0,0,0,0,0,0,0,0,0.288851619751275,4.48833542467929,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94932925234301,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,4.5463118612355,7.09407623330276,6.0662933401774,0,0,0,0,0,0,0,0,0.628332956648377,0,0,0,0,0,0,160.296914647585,0,0,55.4341809802643,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631325567659422,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,244.840318190994,0,0,0.232236671860439,0.38660238396628,3.83198696784351,1.11189021922435,3.04361001780095,32.7425052465713,8.23494773620054,0.502670417600539,1.1937388322469,0.38992817423824,22.4704852163555,60.9509300646638,75.8728251099139,0,0,0,0,0,0.841629838683823,0,0.590440591918409,0.784993639206874,1.35736880313981,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,1.97337154874103,4.82443521363367,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,1.47476983244164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,1.45317984026315,0.542816324353403,0.238744688006273,0,15.1570035047522,0,0,0.412773735926445,0,0,0,0,0,0,0,701.682904241108,0.158167996790568,0.813277868507395,6.04829908602087,14.0089158329694,29.2605835419878,41.9428117256792,36.6154808863238,309.657279367107,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0,0,3.62768613784338,0,0,0,0.19318959403219,0,0,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0.565879024158229,0.280924522409647,0.128050304809739,0.114870937911227,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.715308569841963,0.290692833264657,0.752875043322645,0.25384382367503,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,1.15743966588685,0,0.467863216890817,1.50409737833809,0.191288332068843,0,0 | ||
|short_description=p1@Gsta1 | |short_description=p1@Gsta1 | ||
}} | }} |
Latest revision as of 04:16, 27 September 2015
Short description: | p1@Gsta1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gsta1_5end |
Coexpression cluster: | MCL_coexpression_mm9:54 |
Association with transcript: | 10bp_to_NM_008181, uc009qtz.1, uc009qua.1_5end |
EntrezGene: | Gsta1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.67e-08 | 3 |
epithelial cell of tracheobronchial tree | 3.67e-08 | 3 |
branched duct epithelial cell | 3.67e-08 | 3 |
epithelial cell of lower respiratory tract | 3.67e-08 | 3 |
respiratory epithelial cell | 3.67e-08 | 3 |
tracheal epithelial cell | 3.67e-08 | 3 |
tracheoblast | 3.67e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.44e-22 | 47 |
subdivision of digestive tract | 2.09e-16 | 114 |
digestive system | 5.27e-16 | 116 |
digestive tract | 5.27e-16 | 116 |
primitive gut | 5.27e-16 | 116 |
endoderm-derived structure | 1.29e-15 | 118 |
endoderm | 1.29e-15 | 118 |
presumptive endoderm | 1.29e-15 | 118 |
intestine | 3.00e-13 | 31 |
stomach | 2.03e-09 | 16 |
food storage organ | 2.03e-09 | 16 |
trachea | 3.67e-08 | 3 |
respiratory airway | 3.67e-08 | 3 |
tracheobronchial tree | 3.67e-08 | 3 |
lower respiratory tract | 3.67e-08 | 3 |
organ system subdivision | 8.70e-07 | 194 |