FFCP PHASE1:Mm9::chr7:20282060..20282097,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=200 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:20282060..20282097,- | |||
|description=CAGE_peak_at_chr7:20282060..20282097,- | |description=CAGE_peak_at_chr7:20282060..20282097,- | ||
|id=chr7:20282060..20282097,- | |id=chr7:20282060..20282097,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.45e-09,5;CL:0002319,5.20e-08,43;CL:0002321,8.19e-08,70;CL:0000221,9.87e-08,44;CL:0000133,9.87e-08,44;CL:0002194,1.09e-07,4;CL:0000766,1.09e-07,4;CL:0000234,1.09e-07,4;CL:0000576,1.09e-07,4;CL:0000235,1.09e-07,4;CL:0000864,1.09e-07,4;CL:0002009,1.09e-07,4;CL:0000040,1.09e-07,4;CL:0000559,1.09e-07,4;CL:0002453,3.02e-07,8;CL:0002092,4.87e-07,3;CL:0002540,4.87e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.70e-13!22;UBERON:0007499!2.70e-13!22;UBERON:0006925!2.70e-13!22;UBERON:0009497!2.70e-13!22;UBERON:0000015!2.70e-13!22;UBERON:0002423!2.70e-13!22;UBERON:0006235!2.70e-13!22;UBERON:0008835!2.70e-13!22;UBERON:0003894!2.70e-13!22;UBERON:0004161!2.70e-13!22;UBERON:0008836!2.70e-13!22;UBERON:0002365!9.11e-13!25;UBERON:0002330!9.11e-13!25;UBERON:0009854!3.42e-12!23;UBERON:0009856!3.42e-12!23;UBERON:0001017!3.12e-10!73;UBERON:0005743!3.12e-10!73;UBERON:0004121!3.43e-10!102;UBERON:0000924!3.43e-10!102;UBERON:0006601!3.43e-10!102;UBERON:0000073!1.04e-09!75;UBERON:0001016!1.04e-09!75;UBERON:0000025!4.03e-09!114;UBERON:0004111!5.26e-08!122;UBERON:0005172!3.38e-07!49;UBERON:0005173!3.38e-07!49;UBERON:0002417!3.38e-07!49;UBERON:0000916!3.38e-07!49;UBERON:0001049!8.99e-07!52;UBERON:0005068!8.99e-07!52;UBERON:0006241!8.99e-07!52;UBERON:0007135!8.99e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.10e-29,22;UBERON:0007499,6.10e-29,22;UBERON:0006925,6.10e-29,22;UBERON:0009497,6.10e-29,22;UBERON:0000015,6.10e-29,22;UBERON:0002423,6.10e-29,22;UBERON:0006235,6.10e-29,22;UBERON:0008835,6.10e-29,22;UBERON:0003894,6.10e-29,22;UBERON:0004161,6.10e-29,22;UBERON:0008836,6.10e-29,22;UBERON:0009854,1.99e-27,23;UBERON:0009856,1.99e-27,23;UBERON:0002365,9.18e-25,25;UBERON:0002330,9.18e-25,25;UBERON:0005256,2.02e-12,45;UBERON:0003914,1.19e-11,47;UBERON:0000025,1.15e-10,114;UBERON:0005172,6.66e-10,49;UBERON:0005173,6.66e-10,49;UBERON:0002417,6.66e-10,49;UBERON:0000916,6.66e-10,49;UBERON:0004111,2.23e-09,122;UBERON:0003929,2.95e-08,55;UBERON:0003104,9.95e-08,61;UBERON:0009142,9.95e-08,61;UBERON:0002368,3.77e-07,60;UBERON:0011216,8.99e-07,194;UBERON:0000490,9.43e-07,66 | |||
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|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0.137114433605739,0,0.255129870453209,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,1.56478268869608,2.18025156380447,0.439372365468944,2.13872888981712,0.699932108126813,1.43752564364972,0,0,0,0,0,1.03134418455488,0.404632921719196,0,0,0,0,48.5945847331955,69.2206453796882,47.6021677013887,20.9720077362883,30.7374644257244,0,0,0,2.57085885963423,2.87129103237098,0.122490799214954,0,0,4.40463523997555,0.766124028511126,1.38245879930619,0,0.182975287204819,0,3.90856198601933,3.37657566019008,2.75036845998258,3.24091444021034,1.85083185038834,0.372798891650601,0,0.0755715601067855,1.44932244350839,19.7897491705719,14.9593693415705,23.2072372404261,29.8897152025928,18.8171292580881,1.96622188184453,0,0,0,0,0,0,0,0,0,0,6.73684890342454,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.60289056221049,0.117588707135705,0.125666591329675,2.22475470960936,0.433798070759735,0.884610551949874,0,0,0,0,0.292780797011547,0.41889341362691,0,0.11981512450592,0.599902730993408,0,0.898743836428936,0.915001205637253,0.251308704225729,1.04294592115366,0.511430914660661,1.0389402227978,0.324482526135515,0.203678727700633,0.124406970610093,0.505445516867349,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0.219550115291051,0.536825675041487,0.841159794256509,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0.570676878337677,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.432276099749388,0,0,0,0,0,0,0.140271639780637,0.189709611372772,0.442830443938806,0.31399745568275,0.123397163921801,18.3800628794032,0,0.393117990226406,1.34917267430912,1.21716072833102,1.4470629585145,5.0925170356284,6.04161888646702,5.5125977103512,7.96228098245436,96.3246983733275,11.9085103253921,11.5453939052387,8.84026072814891,7.89348619496414,9.64887042726734,0.369506380333209,0.189491411770485,0,0,0,0,0.476087281772027,0.390267295715598,0.157635144106191,0,0.159454768657487,0,0,0,16.5870412333199,1.08781136763742,0.491764273019036,0.827810238914197,0.80275294993896,0.586058432961016,0,0.504941854408746,0,0,0,1.19484398976276,0.222798674082394,1.41538265394416,0.809621403349789,1.16902343164525,0.790575555893047,0.963963949265421,0.141940085208269,0.35613120733451,0.162886959353576,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0.532020700926821,0,0.329098041204242,0.304464949114599,0,0.21183207086382,0,2.96795255294664,0,0.0603129249281559,0.835606408021955,0.656563598980245,0,0.18542530201051,0.512612642393558,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,1.90934123603023,0,0,0,0,0,0.269728692769641,0.578574190077352,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0.2604087696879,0,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0.295379054349154,0.100966449948148,0,0.201652370273681,0.194915761479505,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0.563047426353546,0.549454872801795,0,0,0.564751842617067,0,0.572895513439397,1.3748254587495,0.685082519770642,2.2661816921691,1.35004500046361,0.900642406448441,0.906284817968409,0.51776031175182,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0.183843508450014,0,0.618105171716683,0,0.758091635291392,0,0,0.280924522409647,0.192075457214608,0.17230640686684,0,0.115884325944855,0.192909220463705,1.23625770240992,0.147198920134397,0,0.177475806159338,0.715308569841963,0.145346416632329,0.188218760830661,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0,0.0985044823755635,0,0.464810523557898,0,0,0,0.859484216193193,0.191288332068843,0.441182838239031,0 | ||
|short_description=p@chr7:20282060..20282097,- | |short_description=p@chr7:20282060..20282097,- | ||
}} | }} |
Latest revision as of 18:23, 4 August 2015
Short description: | p@chr7:20282060..20282097, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20282060..20282097, - |
Coexpression cluster: | MCL_coexpression_mm9:200 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.45e-09 | 5 |
neural cell | 5.20e-08 | 43 |
embryonic cell | 8.19e-08 | 70 |
ectodermal cell | 9.87e-08 | 44 |
neurectodermal cell | 9.87e-08 | 44 |
monopoietic cell | 1.09e-07 | 4 |
myeloid leukocyte | 1.09e-07 | 4 |
phagocyte | 1.09e-07 | 4 |
monocyte | 1.09e-07 | 4 |
macrophage | 1.09e-07 | 4 |
tissue-resident macrophage | 1.09e-07 | 4 |
macrophage dendritic cell progenitor | 1.09e-07 | 4 |
monoblast | 1.09e-07 | 4 |
promonocyte | 1.09e-07 | 4 |
oligodendrocyte precursor cell | 3.02e-07 | 8 |
bone marrow cell | 4.87e-07 | 3 |
mesenchymal stem cell of the bone marrow | 4.87e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 6.10e-29 | 22 |
epithelial sac | 6.10e-29 | 22 |
digestive gland | 6.10e-29 | 22 |
epithelium of foregut-midgut junction | 6.10e-29 | 22 |
anatomical boundary | 6.10e-29 | 22 |
hepatobiliary system | 6.10e-29 | 22 |
foregut-midgut junction | 6.10e-29 | 22 |
hepatic diverticulum | 6.10e-29 | 22 |
liver primordium | 6.10e-29 | 22 |
septum transversum | 6.10e-29 | 22 |
liver bud | 6.10e-29 | 22 |
digestive tract diverticulum | 1.99e-27 | 23 |
sac | 1.99e-27 | 23 |
exocrine gland | 9.18e-25 | 25 |
exocrine system | 9.18e-25 | 25 |
trunk mesenchyme | 2.02e-12 | 45 |
epithelial tube | 1.19e-11 | 47 |
tube | 1.15e-10 | 114 |
abdomen element | 6.66e-10 | 49 |
abdominal segment element | 6.66e-10 | 49 |
abdominal segment of trunk | 6.66e-10 | 49 |
abdomen | 6.66e-10 | 49 |
anatomical conduit | 2.23e-09 | 122 |
gut epithelium | 2.95e-08 | 55 |
mesenchyme | 9.95e-08 | 61 |
entire embryonic mesenchyme | 9.95e-08 | 61 |
endocrine gland | 3.77e-07 | 60 |
organ system subdivision | 8.99e-07 | 194 |
unilaminar epithelium | 9.43e-07 | 66 |