FFCP PHASE1:Mm9::chr7:134005204..134005242,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=233875 | |EntrezGene=233875 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=130 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENSMUST00000153764_5end | |association_with_transcript=3bp_to_ENSMUST00000153764_5end | ||
|cluster_id=chr7:134005204..134005242,- | |||
|description=CAGE_peak_4_at_Ino80e_5end | |description=CAGE_peak_4_at_Ino80e_5end | ||
|id=chr7:134005204..134005242,- | |id=chr7:134005204..134005242,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,3.28e-14,7;CL:0002320,1.57e-11,46;CL:0000134,1.57e-11,46;CL:0000049,2.37e-11,19;CL:0000988,2.86e-11,32;CL:0002032,2.86e-11,32;CL:0000037,2.86e-11,32;CL:0000837,2.86e-11,32;CL:0000473,1.96e-09,7;CL:0000219,4.13e-09,54;CL:0002194,4.45e-08,4;CL:0000766,4.45e-08,4;CL:0000234,4.45e-08,4;CL:0000576,4.45e-08,4;CL:0000235,4.45e-08,4;CL:0000864,4.45e-08,4;CL:0002009,4.45e-08,4;CL:0000040,4.45e-08,4;CL:0000559,4.45e-08,4;CL:0000034,5.88e-08,97;CL:0000763,5.34e-07,16;CL:0002092,9.70e-07,3;CL:0002540,9.70e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.57e-07,3;DOID:4045,2.57e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.57e-11,46;UBERON:0002371,3.00e-11,16;UBERON:0002204,8.14e-10,32;UBERON:0001474,2.54e-09,22;UBERON:0004765,2.54e-09,22;UBERON:0001434,2.54e-09,22 | |||
|phase1_expression=0.480446541314382,1.04692622291808,2.27499619694768,0,0,1.6787927191189,0.700837921786577,0.129123323441576,0,1.40438715793196,0.34243593645101,0.717949430958028,0,0.174840804837995,0,0.404950534779652,0,0.630924330716475,0.548457734422955,0,0.595303031057488,4.17021995043718,3.6567970479451,1.27993938234725,1.14704640533585,1.72269589234506,0.430761996159075,1.50829862880122,0,0,1.77384408524244,0.635030673459631,1.23012957516914,0,0,0,0,3.76678467663217,7.0320181007142,3.14114246384279,0.588231488031014,1.36609096991689,1.94204141212461,0.125896817975577,0,0.367093504323363,0.782391344348039,0.218025156380447,0,0,0,0,1.67782606057736,0.725362142011344,0,0.771778308107841,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,0,0,0,2.6996991518442,1.97773272513395,2.1314403448383,1.19840044207362,1.53687322128622,0,0,0.210324961351382,0.571301968807607,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0.255374676170375,0.46081959976873,0,0.182975287204819,0,1.11673199600552,0.56276261003168,0.45839474333043,0,0.142371680799103,0.186399445825301,0.075726193333184,0.529000920747499,0.289864488701678,0,0,0,0,0,0.280888840263504,1.02258193546835,0.519572009205738,0,0,0,0,0,0.216491041011214,0,1.01104889002957,0.34255163915718,1.29468941823586,0.29688427812965,0,0,0,0,0.470354828542819,0.125666591329675,0.247194967734374,0,3.5384422077995,0.485300549842228,0.883366073841574,0.969750506270444,1.86391761218122,0.292780797011547,0.41889341362691,0.255457055208591,5.39168060276641,7.7987355029143,8.38663498682227,0,0,0.628271760564322,0.173824320192276,0.255715457330331,0,0,0.509196819251581,0.622034853050465,0.505445516867349,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.204109497453984,0,0,0.258703370739016,0.431135985865684,0.189106080167819,1.05570674498369,0.43839146485515,0.278047249225598,1.0447564995665,0.205782136407943,0.398068533636986,8.42655824775882,15.6982223339976,10.2298859782413,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0.329119699826961,0,0.0810688095458557,0.146199987425332,0.439100230582101,0,0.420579897128254,0,0,0,0.426576501070468,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.280543279561274,0.126473074248515,0.738050739898011,0.156998727841375,0.246794327843601,0,0.83422552858047,0.982794975566015,0.449724224769707,0,0.964708639009667,0.25462585178142,0.575392274901621,1.94562272130042,0.274561413188081,0,0.744281895337007,0,0,0.179397413521912,0.482443521363367,0.739012760666419,0.568474235311454,0.325929952884052,0.678980343100753,0.938760993154008,1.50755631697634,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,1.14704320301017,0.172684981865896,0.723245292907558,3.01582567878545,3.26343410291226,0.491764273019036,0.275936746304732,0.160550589987792,0,1.63934945376675,0,0.631016438832513,0.780877488593277,0.215423397732799,0.716906393857656,0.668396022247182,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0.642642632843614,0.425820255624806,0.35613120733451,0.325773918707152,0.494910368917606,0,0,0.302323556964751,0,0,0.307435147943927,0,0.727067458955011,0,0.632073515871632,0,0,0,0.36012218806262,0,0,0.709360934569094,0.178368817602071,0.493647061806363,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.322928853391811,0.422190474497091,0,0.492422699235184,0,0.18542530201051,1.53783792718067,0.412773735926445,0.740778109478847,0.753473828018764,0.410082683163076,0.457556346413045,2.88963330989554,2.51912614182584,2.21119958087078,0.954670618015114,0.474503990371703,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.5208175393758,0.629156066554265,0.241584120826006,0,0.948033361884535,0.608175645870493,0.821687657318618,0.51968329191118,0.537080087002444,0.79472541912506,0.240390899039938,0.590758108698309,0.403865799792591,0.533447646584999,0.504130925684203,0.0974578807397524,0.577271049841977,0.233753804363138,0.226730383615211,0.221985953374065,0.717710852875806,0.671538465456314,0.19318959403219,0.563047426353546,0,0.214368379079066,0.501572104035363,1.12950368523413,0,0,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0.729320151204882,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0,0.952587382566147,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.715308569841963,0,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0.385813221962283,0,0,0.644613162144895,0.57386499620653,0.882365676478062,0.463735671240843 | |phase1_expression=0.480446541314382,1.04692622291808,2.27499619694768,0,0,1.6787927191189,0.700837921786577,0.129123323441576,0,1.40438715793196,0.34243593645101,0.717949430958028,0,0.174840804837995,0,0.404950534779652,0,0.630924330716475,0.548457734422955,0,0.595303031057488,4.17021995043718,3.6567970479451,1.27993938234725,1.14704640533585,1.72269589234506,0.430761996159075,1.50829862880122,0,0,1.77384408524244,0.635030673459631,1.23012957516914,0,0,0,0,3.76678467663217,7.0320181007142,3.14114246384279,0.588231488031014,1.36609096991689,1.94204141212461,0.125896817975577,0,0.367093504323363,0.782391344348039,0.218025156380447,0,0,0,0,1.67782606057736,0.725362142011344,0,0.771778308107841,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,0,0,0,2.6996991518442,1.97773272513395,2.1314403448383,1.19840044207362,1.53687322128622,0,0,0.210324961351382,0.571301968807607,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0.255374676170375,0.46081959976873,0,0.182975287204819,0,1.11673199600552,0.56276261003168,0.45839474333043,0,0.142371680799103,0.186399445825301,0.075726193333184,0.529000920747499,0.289864488701678,0,0,0,0,0,0.280888840263504,1.02258193546835,0.519572009205738,0,0,0,0,0,0.216491041011214,0,1.01104889002957,0.34255163915718,1.29468941823586,0.29688427812965,0,0,0,0,0.470354828542819,0.125666591329675,0.247194967734374,0,3.5384422077995,0.485300549842228,0.883366073841574,0.969750506270444,1.86391761218122,0.292780797011547,0.41889341362691,0.255457055208591,5.39168060276641,7.7987355029143,8.38663498682227,0,0,0.628271760564322,0.173824320192276,0.255715457330331,0,0,0.509196819251581,0.622034853050465,0.505445516867349,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.204109497453984,0,0,0.258703370739016,0.431135985865684,0.189106080167819,1.05570674498369,0.43839146485515,0.278047249225598,1.0447564995665,0.205782136407943,0.398068533636986,8.42655824775882,15.6982223339976,10.2298859782413,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0.329119699826961,0,0.0810688095458557,0.146199987425332,0.439100230582101,0,0.420579897128254,0,0,0,0.426576501070468,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.280543279561274,0.126473074248515,0.738050739898011,0.156998727841375,0.246794327843601,0,0.83422552858047,0.982794975566015,0.449724224769707,0,0.964708639009667,0.25462585178142,0.575392274901621,1.94562272130042,0.274561413188081,0,0.744281895337007,0,0,0.179397413521912,0.482443521363367,0.739012760666419,0.568474235311454,0.325929952884052,0.678980343100753,0.938760993154008,1.50755631697634,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,1.14704320301017,0.172684981865896,0.723245292907558,3.01582567878545,3.26343410291226,0.491764273019036,0.275936746304732,0.160550589987792,0,1.63934945376675,0,0.631016438832513,0.780877488593277,0.215423397732799,0.716906393857656,0.668396022247182,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0.642642632843614,0.425820255624806,0.35613120733451,0.325773918707152,0.494910368917606,0,0,0.302323556964751,0,0,0.307435147943927,0,0.727067458955011,0,0.632073515871632,0,0,0,0.36012218806262,0,0,0.709360934569094,0.178368817602071,0.493647061806363,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.322928853391811,0.422190474497091,0,0.492422699235184,0,0.18542530201051,1.53783792718067,0.412773735926445,0.740778109478847,0.753473828018764,0.410082683163076,0.457556346413045,2.88963330989554,2.51912614182584,2.21119958087078,0.954670618015114,0.474503990371703,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.5208175393758,0.629156066554265,0.241584120826006,0,0.948033361884535,0.608175645870493,0.821687657318618,0.51968329191118,0.537080087002444,0.79472541912506,0.240390899039938,0.590758108698309,0.403865799792591,0.533447646584999,0.504130925684203,0.0974578807397524,0.577271049841977,0.233753804363138,0.226730383615211,0.221985953374065,0.717710852875806,0.671538465456314,0.19318959403219,0.563047426353546,0,0.214368379079066,0.501572104035363,1.12950368523413,0,0,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0.729320151204882,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0,0.952587382566147,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.715308569841963,0,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0.385813221962283,0,0,0.644613162144895,0.57386499620653,0.882365676478062,0.463735671240843 | ||
|short_description=p4@Ino80e | |short_description=p4@Ino80e | ||
}} | }} |
Latest revision as of 21:42, 25 September 2015
Short description: | p4@Ino80e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ino80e_5end |
Coexpression cluster: | MCL_coexpression_mm9:130 |
Association with transcript: | 3bp_to_ENSMUST00000153764_5end |
EntrezGene: | Ino80e |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 3.28e-14 | 7 |
connective tissue cell | 1.57e-11 | 46 |
mesenchymal cell | 1.57e-11 | 46 |
common myeloid progenitor | 2.37e-11 | 19 |
hematopoietic cell | 2.86e-11 | 32 |
hematopoietic oligopotent progenitor cell | 2.86e-11 | 32 |
hematopoietic stem cell | 2.86e-11 | 32 |
hematopoietic multipotent progenitor cell | 2.86e-11 | 32 |
defensive cell | 1.96e-09 | 7 |
motile cell | 4.13e-09 | 54 |
monopoietic cell | 4.45e-08 | 4 |
myeloid leukocyte | 4.45e-08 | 4 |
phagocyte | 4.45e-08 | 4 |
monocyte | 4.45e-08 | 4 |
macrophage | 4.45e-08 | 4 |
tissue-resident macrophage | 4.45e-08 | 4 |
macrophage dendritic cell progenitor | 4.45e-08 | 4 |
monoblast | 4.45e-08 | 4 |
promonocyte | 4.45e-08 | 4 |
stem cell | 5.88e-08 | 97 |
myeloid cell | 5.34e-07 | 16 |
bone marrow cell | 9.70e-07 | 3 |
mesenchymal stem cell of the bone marrow | 9.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.57e-11 | 46 |
bone marrow | 3.00e-11 | 16 |
musculoskeletal system | 8.14e-10 | 32 |
bone element | 2.54e-09 | 22 |
skeletal element | 2.54e-09 | 22 |
skeletal system | 2.54e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.57e-07 | 3 |
muscle cancer | 2.57e-07 | 3 |