FFCP PHASE1:Mm9::chr7:123177377..123177409,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20679 | |EntrezGene=20679 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=14 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-261bp_to_uc009jit.1_5end | |association_with_transcript=-261bp_to_uc009jit.1_5end | ||
|cluster_id=chr7:123177377..123177409,- | |||
|description=CAGE_peak_7_at_Sox6_5end | |description=CAGE_peak_7_at_Sox6_5end | ||
|id=chr7:123177377..123177409,- | |id=chr7:123177377..123177409,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,9.37e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000075,1.38e-08,6;UBERON:0005856,1.38e-08,6;UBERON:0005866,1.38e-08,6;UBERON:0005863,1.38e-08,6;UBERON:0005418,4.53e-08,5;UBERON:0002472,4.53e-08,5;UBERON:0008784,4.53e-08,5;UBERON:0006058,4.53e-08,5;UBERON:0004709,4.53e-08,5;UBERON:0002529,4.53e-08,5;UBERON:0010538,4.53e-08,5;UBERON:0005420,4.53e-08,5;UBERON:0010758,4.53e-08,5;UBERON:0000978,4.53e-08,5;UBERON:0002103,4.53e-08,5;UBERON:0000376,4.53e-08,5;UBERON:0000154,4.53e-08,5;UBERON:0010709,4.53e-08,5;UBERON:0005730,4.53e-08,5;UBERON:0002410,9.37e-08,9 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.893618560807968,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.659058548203415,0.972149495371417,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,1.49800055259202,1.92109152660777,0.103689612308478,0.405017814995072,0.210324961351382,0.571301968807607,0.883474163806454,0.489963196859816,0.479227355091182,0,0,0.893811366596314,0.153606533256243,0.659431438650969,0.457438218012048,0,0.558365998002762,1.68828783009504,0.61119299110724,0.294628585473668,0.427115042397309,0.186399445825301,0.151452386666368,0.831287161174641,0.869593466105033,0,0,0,0,0,2.10666630197628,0,0,0,2.67602497575693,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0,0,0.461230994512117,0.301445281105245,0.352766121407114,0.251333182659351,0.247194967734374,1.3013942122792,2.65383165584962,4.52947179852746,5.07935492458905,4.84875253135222,0,1.17112318804619,1.25668024088073,0,0,0,0,1.04853447583376,0,0.251308704225729,1.56441888173049,0.767146371990992,1.45451631191692,0.648965052271031,0.509196819251581,1.99051152976149,0,1.05220927943237,0.260240885925407,0.229902104433473,0.540186389416048,1.05493372485001,0.544291993210623,0.2562274405697,0.374806898238915,0.258703370739016,0.215567992932842,0.567318240503458,0.351902248327898,0.43839146485515,0.278047249225598,1.39300866608867,0.61734640922383,0,0,0,0,0.207125772535502,0.703578179943289,0,1.42046841351126,0.787056926989615,1.07986979021165,1.16266972375204,0.268273401399619,0.583826711835847,1.81015834904829,2.79084688934462,2.67527071501324,2.48539978623065,3.29325172936576,1.20785776884335,0.630869845692382,0.308713837137853,0,0,0,0.232236671860439,0.515469845288373,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0.189667900953082,0.571242563048644,0,0.203651327845314,0.581857461502877,0.701358198903186,0.758838445491087,0.590440591918409,0.470996183524124,0.370191491765402,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0.744281895337007,0,0,0.179397413521912,0,0.369506380333209,0.568474235311454,0.488894929326078,0.169745085775188,0.234690248288502,0.502518772325447,0.714130922658041,0.975668239288994,0.157635144106191,0.44292937929755,1.11618338060241,0.163863314715738,0.690739927463582,0,0,0,0,0,0.963303539926752,0.820481806145422,0,16.4106102682842,1.57754109708128,1.56175497718655,1.07711698866399,2.62865677747807,2.67358408898873,5.37845408498782,0.809621403349789,1.46127928955656,1.58115111178609,0,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.728341908464944,0.906970670894253,0.565815239267694,0.590603785761546,0.614870295887855,0.775284879504663,1.45413491791002,1.06949213515416,0.632073515871632,1.05418608574999,0,1.02131881726136,0.540183282093931,0,0.214337035031592,0.709360934569094,0.891844088010353,0.493647061806363,0.304464949114599,0,0,0.441056796109924,2.14352128823924,0.645857706783622,0.542816324353403,0.119372344003136,0.164140899745061,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,1.08005340821801,0.418176592028937,0.218362563746178,0.674321731924103,1.07449492442937,0,0.129614973291793,0.621339313086926,0,0.448549638131936,0.330916980914195,0.388902376688095,0,0.168956125490778,0.234714477291508,0.39061315453185,0.209718688851422,0.241584120826006,0.576060012515731,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,2.0405734525369,0,0,0,0.772758376128762,0,0.183151624267265,0,0.501572104035363,0,1.38097570952153,0.572895513439397,0.68741272937475,0.685082519770642,0,0,0,0.906284817968409,2.07104124700728,0,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.919217542250071,2.22246727801615,2.06035057238894,1.60459604795908,3.03236654116557,1.2673964994512,0.943131706930381,2.1537546718073,1.60062881012173,1.37845125493472,3.81034953026459,2.31768651889711,1.54327376370964,1.64834360321323,1.17759136107518,0.685738504770831,1.77475806159337,0.476872379894642,0.872078499793971,1.78807822789128,2.28459441307527,1.46342378298218,1.05227884575137,1.62964936615034,1.68342681497322,1.77952527186261,1.97008964751127,0.409231043169689,1.23949472948773,1.54325288784913,0.999242311751784,2.33931608445408,1.50409737833809,1.91288332068843,1.76473135295612,3.70988536992674 | |phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.893618560807968,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.659058548203415,0.972149495371417,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,1.49800055259202,1.92109152660777,0.103689612308478,0.405017814995072,0.210324961351382,0.571301968807607,0.883474163806454,0.489963196859816,0.479227355091182,0,0,0.893811366596314,0.153606533256243,0.659431438650969,0.457438218012048,0,0.558365998002762,1.68828783009504,0.61119299110724,0.294628585473668,0.427115042397309,0.186399445825301,0.151452386666368,0.831287161174641,0.869593466105033,0,0,0,0,0,2.10666630197628,0,0,0,2.67602497575693,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0,0,0.461230994512117,0.301445281105245,0.352766121407114,0.251333182659351,0.247194967734374,1.3013942122792,2.65383165584962,4.52947179852746,5.07935492458905,4.84875253135222,0,1.17112318804619,1.25668024088073,0,0,0,0,1.04853447583376,0,0.251308704225729,1.56441888173049,0.767146371990992,1.45451631191692,0.648965052271031,0.509196819251581,1.99051152976149,0,1.05220927943237,0.260240885925407,0.229902104433473,0.540186389416048,1.05493372485001,0.544291993210623,0.2562274405697,0.374806898238915,0.258703370739016,0.215567992932842,0.567318240503458,0.351902248327898,0.43839146485515,0.278047249225598,1.39300866608867,0.61734640922383,0,0,0,0,0.207125772535502,0.703578179943289,0,1.42046841351126,0.787056926989615,1.07986979021165,1.16266972375204,0.268273401399619,0.583826711835847,1.81015834904829,2.79084688934462,2.67527071501324,2.48539978623065,3.29325172936576,1.20785776884335,0.630869845692382,0.308713837137853,0,0,0,0.232236671860439,0.515469845288373,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0.189667900953082,0.571242563048644,0,0.203651327845314,0.581857461502877,0.701358198903186,0.758838445491087,0.590440591918409,0.470996183524124,0.370191491765402,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0.744281895337007,0,0,0.179397413521912,0,0.369506380333209,0.568474235311454,0.488894929326078,0.169745085775188,0.234690248288502,0.502518772325447,0.714130922658041,0.975668239288994,0.157635144106191,0.44292937929755,1.11618338060241,0.163863314715738,0.690739927463582,0,0,0,0,0,0.963303539926752,0.820481806145422,0,16.4106102682842,1.57754109708128,1.56175497718655,1.07711698866399,2.62865677747807,2.67358408898873,5.37845408498782,0.809621403349789,1.46127928955656,1.58115111178609,0,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.728341908464944,0.906970670894253,0.565815239267694,0.590603785761546,0.614870295887855,0.775284879504663,1.45413491791002,1.06949213515416,0.632073515871632,1.05418608574999,0,1.02131881726136,0.540183282093931,0,0.214337035031592,0.709360934569094,0.891844088010353,0.493647061806363,0.304464949114599,0,0,0.441056796109924,2.14352128823924,0.645857706783622,0.542816324353403,0.119372344003136,0.164140899745061,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,1.08005340821801,0.418176592028937,0.218362563746178,0.674321731924103,1.07449492442937,0,0.129614973291793,0.621339313086926,0,0.448549638131936,0.330916980914195,0.388902376688095,0,0.168956125490778,0.234714477291508,0.39061315453185,0.209718688851422,0.241584120826006,0.576060012515731,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,2.0405734525369,0,0,0,0.772758376128762,0,0.183151624267265,0,0.501572104035363,0,1.38097570952153,0.572895513439397,0.68741272937475,0.685082519770642,0,0,0,0.906284817968409,2.07104124700728,0,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.919217542250071,2.22246727801615,2.06035057238894,1.60459604795908,3.03236654116557,1.2673964994512,0.943131706930381,2.1537546718073,1.60062881012173,1.37845125493472,3.81034953026459,2.31768651889711,1.54327376370964,1.64834360321323,1.17759136107518,0.685738504770831,1.77475806159337,0.476872379894642,0.872078499793971,1.78807822789128,2.28459441307527,1.46342378298218,1.05227884575137,1.62964936615034,1.68342681497322,1.77952527186261,1.97008964751127,0.409231043169689,1.23949472948773,1.54325288784913,0.999242311751784,2.33931608445408,1.50409737833809,1.91288332068843,1.76473135295612,3.70988536992674 | ||
|short_description=p7@Sox6 | |short_description=p7@Sox6 | ||
}} | }} |
Latest revision as of 18:39, 25 September 2015
Short description: | p7@Sox6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Sox6_5end |
Coexpression cluster: | MCL_coexpression_mm9:14 |
Association with transcript: | -261bp_to_uc009jit.1_5end |
EntrezGene: | Sox6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 9.37e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
subdivision of skeletal system | 1.38e-08 | 6 |
developing mesenchymal condensation | 1.38e-08 | 6 |
pre-cartilage condensation | 1.38e-08 | 6 |
cartilaginous condensation | 1.38e-08 | 6 |
hindlimb bud | 4.53e-08 | 5 |
stylopod | 4.53e-08 | 5 |
lower limb segment | 4.53e-08 | 5 |
multi-limb segment region | 4.53e-08 | 5 |
pelvic appendage | 4.53e-08 | 5 |
limb segment | 4.53e-08 | 5 |
paired limb/fin segment | 4.53e-08 | 5 |
pelvic appendage bud | 4.53e-08 | 5 |
subdivision of organism along appendicular axis | 4.53e-08 | 5 |
leg | 4.53e-08 | 5 |
hindlimb | 4.53e-08 | 5 |
hindlimb stylopod | 4.53e-08 | 5 |
posterior region of body | 4.53e-08 | 5 |
pelvic complex | 4.53e-08 | 5 |
hindlimb/pelvic fin field | 4.53e-08 | 5 |
autonomic nervous system | 9.37e-08 | 9 |