FFCP PHASE1:Mm9::chr9:120084593..120084603,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=293 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:120084593..120084603,+ | |||
|description=CAGE_peak_at_chr9:120084593..120084603,+ | |description=CAGE_peak_at_chr9:120084593..120084603,+ | ||
|id=chr9:120084593..120084603,+ | |id=chr9:120084593..120084603,+ | ||
|ontology_enrichment_celltype=CL:0002610!1.60e-10!3;CL:0000117!4.60e-08!23;CL:0000337!4.60e-08!23;CL:0002611!7.82e-08!2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.24e-22!73;UBERON:0005743!1.24e-22!73;UBERON:0001049!1.45e-22!52;UBERON:0005068!1.45e-22!52;UBERON:0006241!1.45e-22!52;UBERON:0007135!1.45e-22!52;UBERON:0000073!6.48e-22!75;UBERON:0001016!6.48e-22!75;UBERON:0003076!3.23e-21!12;UBERON:0003057!3.23e-21!12;UBERON:0000955!4.44e-21!50;UBERON:0006238!4.44e-21!50;UBERON:0002616!2.90e-19!49;UBERON:0000033!5.96e-16!63;UBERON:0002346!1.78e-15!71;UBERON:0003075!1.78e-15!71;UBERON:0007284!1.78e-15!71;UBERON:0004121!5.93e-15!102;UBERON:0000924!5.93e-15!102;UBERON:0006601!5.93e-15!102;UBERON:0002240!1.35e-13!6;UBERON:0005174!1.35e-13!6;UBERON:0001137!1.35e-13!6;UBERON:0002021!3.81e-12!10;UBERON:0000411!3.81e-12!10;UBERON:0001950!3.81e-12!10;UBERON:0002020!4.16e-12!34;UBERON:0007811!1.14e-10!86;UBERON:0001948!1.43e-10!5;UBERON:0002315!1.43e-10!5;UBERON:0004684!1.60e-10!3;UBERON:0002275!1.60e-10!3;UBERON:0002298!8.00e-10!6;UBERON:0000153!1.95e-09!94;UBERON:0004733!2.44e-09!6;UBERON:0004732!2.44e-09!6;UBERON:0002028!2.44e-09!6;UBERON:0007277!2.44e-09!6;UBERON:0003080!1.60e-08!40;UBERON:0001896!2.20e-08!2;UBERON:0005290!2.20e-08!2;UBERON:0010096!2.20e-08!2;UBERON:0000025!3.87e-08!114;UBERON:0002256!7.82e-08!2;UBERON:0004111!2.42e-07!122;UBERON:0000956!3.34e-07!21;UBERON:0001869!3.34e-07!21;UBERON:0000203!3.34e-07!21;UBERON:0002780!3.37e-07!39;UBERON:0001890!3.37e-07!39;UBERON:0006240!3.37e-07!39;UBERON:0002619!6.95e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.26e-17,2;UBERON:0002298,2.26e-17,2;UBERON:0005290,2.26e-17,2;UBERON:0010096,2.26e-17,2;UBERON:0001049,8.49e-15,52;UBERON:0005068,8.49e-15,52;UBERON:0006241,8.49e-15,52;UBERON:0007135,8.49e-15,52;UBERON:0000073,3.28e-14,54;UBERON:0001017,1.39e-12,73;UBERON:0001016,3.15e-12,75;UBERON:0002346,6.80e-12,64;UBERON:0003075,6.80e-12,64;UBERON:0007284,6.80e-12,64;UBERON:0003076,3.83e-11,12;UBERON:0003057,3.83e-11,12;UBERON:0002616,1.05e-10,46;UBERON:0000955,1.82e-10,47;UBERON:0006238,1.82e-10,47;UBERON:0010371,2.45e-10,73;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0010314,4.89e-08,92;UBERON:0002021,6.86e-08,10;UBERON:0000411,6.86e-08,10;UBERON:0001950,6.86e-08,10;UBERON:0002780,3.31e-07,39;UBERON:0001890,3.31e-07,39;UBERON:0006240,3.31e-07,39;UBERON:0003080,5.08e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28520787523043,0.441737081903227,0,0,0,1.10115880999389,0.510749352340751,0.46081959976873,0,0,0,0,0,1.22238598221448,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.898743836428936,0,0,0.347648640384553,0.511430914660661,1.0389402227978,2.10913641988085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,3.04750385139728,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,2.29158205375759,0.859265911718438,0.685082519770642,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28520787523043,0.441737081903227,0,0,0,1.10115880999389,0.510749352340751,0.46081959976873,0,0,0,0,0,1.22238598221448,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.898743836428936,0,0,0.347648640384553,0.511430914660661,1.0389402227978,2.10913641988085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,3.04750385139728,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,2.29158205375759,0.859265911718438,0.685082519770642,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr9:120084593..120084603,+ | |short_description=p@chr9:120084593..120084603,+ | ||
}} | }} |
Latest revision as of 18:00, 4 August 2015
Short description: | p@chr9:120084593..120084603, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:120084593..120084603, + |
Coexpression cluster: | MCL_coexpression_mm9:293 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.26e-17 | 2 |
brainstem | 2.26e-17 | 2 |
myelencephalon | 2.26e-17 | 2 |
future myelencephalon | 2.26e-17 | 2 |
neural tube | 8.49e-15 | 52 |
neural rod | 8.49e-15 | 52 |
future spinal cord | 8.49e-15 | 52 |
neural keel | 8.49e-15 | 52 |
regional part of nervous system | 3.28e-14 | 54 |
central nervous system | 1.39e-12 | 73 |
nervous system | 3.15e-12 | 75 |
neurectoderm | 6.80e-12 | 64 |
neural plate | 6.80e-12 | 64 |
presumptive neural plate | 6.80e-12 | 64 |
posterior neural tube | 3.83e-11 | 12 |
chordal neural plate | 3.83e-11 | 12 |
regional part of brain | 1.05e-10 | 46 |
brain | 1.82e-10 | 47 |
future brain | 1.82e-10 | 47 |
ecto-epithelium | 2.45e-10 | 73 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
structure with developmental contribution from neural crest | 4.89e-08 | 92 |
occipital lobe | 6.86e-08 | 10 |
visual cortex | 6.86e-08 | 10 |
neocortex | 6.86e-08 | 10 |
regional part of forebrain | 3.31e-07 | 39 |
forebrain | 3.31e-07 | 39 |
future forebrain | 3.31e-07 | 39 |
anterior neural tube | 5.08e-07 | 40 |