FF:1311-23C1: Difference between revisions

Latest revision as of 18:51, 4 June 2020

Name:	adrenal gland, neonate N00
Species:	Mouse (Mus musculus)
Library ID:	CNhs11191
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	adrenal gland
dev stage	0 day neonate
sex	mixture
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005683

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11191		CAGE		DRX008932		DRR009806

Accession ID Mm9

Library id		BAM		CTSS
CNhs11191		DRZ001231		DRZ002614

Accession ID Mm10

Library id		BAM		CTSS
CNhs11191		DRZ012581		DRZ013964

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs11191

0	0
1	0.0695
10	0
100	0
1000	0.111
1001	0.167
1002	0.351
1003	-0.0087
1004	0
1005	0
1006	0.166
1007	0.039
1008	0
1009	0.295
101	0.0227
1010	0
1011	0.0399
1012	0.0917
1013	0.0601
1014	0.476
1015	-0.102
1016	0.188
1017	0
1018	0
1019	0
102	0
1020	0
1021	0.0228
1022	0.108
1023	0.0483
1024	0.111
1025	0.0306
1026	0.0483
1027	0
1028	0
1029	0.239
103	0.293
1030	0.0483
1031	0.276
1032	0.0175
1033	0
1034	0.0917
1035	0.0483
1036	-0.0289
1037	0
1038	-0.0119
1039	0.129
104	0
1040	0.226
1041	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11191

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0202
MA0003.1	MA0003.1	0.673
MA0004.1	MA0004.1	0.0319
MA0006.1	MA0006.1	0.668
MA0007.1	MA0007.1	0.534
MA0009.1	MA0009.1	0.0259
MA0014.1	MA0014.1	0.986
MA0017.1	MA0017.1	0.0159
MA0018.2	MA0018.2	0.111
MA0019.1	MA0019.1	0.551
MA0024.1	MA0024.1	0.654
MA0025.1	MA0025.1	0.286
MA0027.1	MA0027.1	0.0963
MA0028.1	MA0028.1	7.79166e-4
MA0029.1	MA0029.1	0.00299
MA0030.1	MA0030.1	0.435
MA0031.1	MA0031.1	0.748
MA0035.2	MA0035.2	0.438
MA0038.1	MA0038.1	0.801
MA0039.2	MA0039.2	0.0715
MA0040.1	MA0040.1	0.114
MA0041.1	MA0041.1	0.233
MA0042.1	MA0042.1	0.691
MA0043.1	MA0043.1	0.108
MA0046.1	MA0046.1	5.42554e-4
MA0047.2	MA0047.2	0.506
MA0048.1	MA0048.1	0.593
MA0050.1	MA0050.1	0.84
MA0051.1	MA0051.1	0.275
MA0052.1	MA0052.1	0.615
MA0055.1	MA0055.1	0.093
MA0057.1	MA0057.1	0.223
MA0058.1	MA0058.1	0.0517
MA0059.1	MA0059.1	0.00721
MA0060.1	MA0060.1	8.81034e-4
MA0061.1	MA0061.1	0.0769
MA0062.2	MA0062.2	8.53495e-8
MA0065.2	MA0065.2	0.208
MA0066.1	MA0066.1	0.507
MA0067.1	MA0067.1	0.58
MA0068.1	MA0068.1	0.401
MA0069.1	MA0069.1	0.408
MA0070.1	MA0070.1	0.112
MA0071.1	MA0071.1	0.139
MA0072.1	MA0072.1	0.335
MA0073.1	MA0073.1	0.877
MA0074.1	MA0074.1	0.308
MA0076.1	MA0076.1	0.00351
MA0077.1	MA0077.1	0.64
MA0078.1	MA0078.1	0.201
MA0079.2	MA0079.2	0.112
MA0080.2	MA0080.2	1.00844e-7
MA0081.1	MA0081.1	0.0579
MA0083.1	MA0083.1	0.526
MA0084.1	MA0084.1	0.0436
MA0087.1	MA0087.1	0.0515
MA0088.1	MA0088.1	0.144
MA0090.1	MA0090.1	0.564
MA0091.1	MA0091.1	0.956
MA0092.1	MA0092.1	0.876
MA0093.1	MA0093.1	0.0598
MA0099.2	MA0099.2	0.352
MA0100.1	MA0100.1	0.0359
MA0101.1	MA0101.1	0.0946
MA0102.2	MA0102.2	0.949
MA0103.1	MA0103.1	2.88637e-8
MA0104.2	MA0104.2	0.00182
MA0105.1	MA0105.1	0.00924
MA0106.1	MA0106.1	0.996
MA0107.1	MA0107.1	0.205
MA0108.2	MA0108.2	0.208
MA0111.1	MA0111.1	0.879
MA0112.2	MA0112.2	0.303
MA0113.1	MA0113.1	0.96
MA0114.1	MA0114.1	0.0129
MA0115.1	MA0115.1	0.0959
MA0116.1	MA0116.1	0.0925
MA0117.1	MA0117.1	0.804
MA0119.1	MA0119.1	0.603
MA0122.1	MA0122.1	0.283
MA0124.1	MA0124.1	0.515
MA0125.1	MA0125.1	0.291
MA0131.1	MA0131.1	0.477
MA0135.1	MA0135.1	0.363
MA0136.1	MA0136.1	2.03581e-10
MA0137.2	MA0137.2	0.0698
MA0138.2	MA0138.2	0.0271
MA0139.1	MA0139.1	0.191
MA0140.1	MA0140.1	0.116
MA0141.1	MA0141.1	0.0392
MA0142.1	MA0142.1	0.66
MA0143.1	MA0143.1	0.42
MA0144.1	MA0144.1	0.265
MA0145.1	MA0145.1	0.783
MA0146.1	MA0146.1	0.69
MA0147.1	MA0147.1	3.80861e-4
MA0148.1	MA0148.1	0.97
MA0149.1	MA0149.1	0.496
MA0150.1	MA0150.1	0.647
MA0152.1	MA0152.1	0.114
MA0153.1	MA0153.1	1.22581e-5
MA0154.1	MA0154.1	0.869
MA0155.1	MA0155.1	0.712
MA0156.1	MA0156.1	1.82343e-6
MA0157.1	MA0157.1	0.985
MA0159.1	MA0159.1	0.0105
MA0160.1	MA0160.1	0.59
MA0162.1	MA0162.1	0.356
MA0163.1	MA0163.1	0.982
MA0164.1	MA0164.1	0.579
MA0258.1	MA0258.1	0.409
MA0259.1	MA0259.1	0.102

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11191

Novel motif	Logo	P-value
1	1	0.026
10	10	0.0924
100	100	0.757
101	101	0.627
102	102	0.85
103	103	0.67
104	104	0.427
105	105	0.295
106	106	0.751
107	107	0.164
108	108	0.289
109	109	0.0685
11	11	0.189
110	110	0.813
111	111	0.0625
112	112	0.969
113	113	0.823
114	114	0.824
115	115	0.737
116	116	0.121
117	117	0.0184
118	118	0.703
119	119	0.669
12	12	0.315
120	120	0.117
121	121	0.239
122	122	0.98
123	123	0.42
124	124	0.22
125	125	0.149
126	126	0.0496
127	127	0.805
128	128	0.137
129	129	0.476
13	13	0.0845
130	130	0.602
131	131	0.374
132	132	0.926
133	133	0.0933
134	134	0.78
135	135	0.0642
136	136	0.216
137	137	0.416
138	138	0.315
139	139	0.919
14	14	0.624
140	140	0.727
141	141	0.783
142	142	0.453
143	143	0.493
144	144	0.0453
145	145	0.631
146	146	0.951
147	147	0.697
148	148	0.204
149	149	0.19
15	15	0.199
150	150	0.777
151	151	0.64
152	152	0.314
153	153	0.394
154	154	0.974
155	155	0.162
156	156	0.285
157	157	0.937
158	158	0.506
159	159	0.0972
160	160	0.424
161	161	0.306
162	162	0.658
163	163	0.254
164	164	0.914
165	165	0.217
166	166	0.321
167	167	0.711
168	168	0.929
169	169	0.21
17	17	0.902
18	18	0.888
19	19	0.199
2	2	0.187
20	20	0.216
21	21	0.67
22	22	0.537
23	23	0.421
24	24	0.427
25	25	0.12
26	26	0.148
27	27	0.775
28	28	0.318
29	29	0.143
3	3	0.456
30	30	0.95
31	31	0.923
32	32	0.643
33	33	0.299
34	34	0.757
35	35	0.17
36	36	0.0602
37	37	0.661
38	38	0.552
39	39	0.785
4	4	0.513
40	40	0.0878
41	41	0.00445
42	42	0.536
43	43	0.772
44	44	0.381
45	45	0.55
46	46	0.421
47	47	0.3
48	48	0.293
49	49	0.39
5	5	0.512
50	50	0.612
51	51	0.94
52	52	0.823
53	53	0.518
54	54	0.758
55	55	0.00263
56	56	0.903
57	57	0.704
58	58	0.329
59	59	0.25
6	6	0.862
60	60	0.365
61	61	0.309
62	62	0.164
63	63	0.45
64	64	0.627
65	65	0.217
66	66	0.226
67	67	0.977
68	68	0.281
69	69	0.462
7	7	0.0817
70	70	0.0348
71	71	0.0213
72	72	0.482
73	73	0.783
74	74	0.812
75	75	0.15
76	76	0.897
77	77	0.797
78	78	0.923
79	79	0.523
8	8	0.583
80	80	0.406
81	81	0.88
82	82	0.16
83	83	0.112
84	84	0.958
85	85	0.241
86	86	0.692
87	87	9.1921e-5
88	88	0.76
89	89	0.0891
9	9	0.889
90	90	0.3
91	91	0.309
92	92	0.778
93	93	0.276
94	94	0.436
95	95	0.43
96	96	0.914
97	97	0.579
98	98	0.305
99	99	0.539

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11191

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011505 mouse adrenal gland - neonate N00 sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0002369 (adrenal gland)
0002100 (trunk)
0000479 (tissue)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0005177 (trunk region element)
0005172 (abdomen element)
0002530 (gland)
0006858 (adrenal/interrenal gland)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0000916 (abdomen)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000004 (tissue sample)
0000303 (neonate sample - mouse)
0000304 (mouse neonate N0 sample)
0011505 (mouse adrenal gland - neonate N00 sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)

@@ Line 1: / Line 1: @@
 {{f5samples
-|DRA_sample_Accession=CAGE@DRS008795
+|DRA_sample_Accession=CAGE@SAMD00005683
+|accession_numbers=CAGE;DRX008932;DRR009806;DRZ001231;DRZ002614;DRZ012581;DRZ013964
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002369,UBERON:0002100,UBERON:0000479,UBERON:0010314,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002368,UBERON:0005177,UBERON:0005172,UBERON:0002530,UBERON:0006858,UBERON:0010317,UBERON:0005173,UBERON:0002417,UBERON:0000949,UBERON:0000916
 |ancestors_in_cell_lineage_facet=
@@ Line 8: / Line 9: @@
 |created_by=
 |creation_date=
-|datafreeze_phase=1
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr2:38570011..38570034,-!p1@Nr5a1!2.18!151.22!Nr5a1;;chr7:108966820..108966835,+!p1@Phox2a!1.68!47.27!Phox2a;;chr8:59799772..59799789,+!p1@Hand2!1.60!107.36!Hand2;;chr6:83020355..83020371,-!p1@Tlx2!1.39!23.75!Tlx2;;chr11:96143666..96143725,+!p1@Hoxb8!1.38!26.22!Hoxb8;;chr11:57645506..57645523,-!p1@Hand1!1.37!22.46!Hand1;;chr10:22539932..22539956,-!p1@Tcf21!1.35!55.97!Tcf21;;chr11:96153767..96153822,+!p1@Hoxb6!1.34!32.34!Hoxb6;;chrX:83437105..83437121,+!p1@Nr0b1!1.24!16.23!Nr0b1;;chr15:102828658..102828678,+!p1@Hoxc6!1.23!15.87!Hoxc6;;chr10:88996295..88996335,-!p3@Nr1h4!1.20!17.87!Nr1h4;;chr15:101097270..101097290,+!p1@Nr4a1!1.17!141.58!Nr4a1;;chr11:5761979..5761992,+!p2@Aebp1!1.17!27.87!Aebp1;;chr9:24578720..24578735,-!p1@Tbx20!1.17!13.64!Tbx20;;chr1:140739014..140739032,-!p1@Lhx9!1.16!17.17!Lhx9;;chr2:38567715..38567730,-!p2@Nr5a1!1.15!13.17!Nr5a1;;chr7:6649134..6649167,-!p1@Zim1!1.12!65.26!Zim1;;chr10:88996336..88996380,-!p2@Nr1h4!1.10!14.35!Nr1h4;;chr14:63864056..63864102,-!p1@Gata4!1.07!18.93!Gata4;;chr11:98636400..98636418,-!p4@Nr1d1!1.06!13.88!Nr1d1;;chr11:5761889..5761969,+!p1@Aebp1!1.05!431.90!Aebp1;;chr5:67490284..67490302,-!p1@Phox2b!1.05!10.35!Phox2b;;chr5:67490474..67490494,-!p2@Phox2b!1.04!10.00!Phox2b;;chr7:116154364..116154444,+!p1@Tub!1.02!16.46!Tub;;chr11:98636508..98636524,-!p3@Nr1d1!0.99!10.82!Nr1d1;;chr11:96147952..96147967,+!p1@Hoxb7!0.98!10.82!Hoxb7;;chr11:96145450..96145517,+!p2@Hoxb7!0.93!11.41!Hoxb7;;chr2:104966766..104966786,+!p1@Wt1!0.92!11.88!Wt1;;chr2:9800207..9800234,-!p1@Gata3!0.91!22.69!Gata3;;chr10:12810631..12810649,+!p1@Plagl1!0.89!186.14!Plagl1;;chr5:92391466..92391471,+!p2@Thap6!0.89!10.00!Thap6;;chrX:90531838..90531861,+!p1@Arx!0.89!8.58!Arx;;chr11:98636531..98636559,-!p1@Nr1d1!0.87!38.92!Nr1d1;;chr15:102839948..102839975,+!p3@Hoxc6!0.87!6.35!Hoxc6;;chr4:43575544..43575565,+!p2@Creb3!0.86!38.80!Creb3;;chr13:99124189..99124205,+!p1@Foxd1!0.86!9.76!Foxd1;;chr15:35225845..35225867,+!p1@Osr2!0.84!15.76!Osr2;;chr13:117099847..117099907,-!p1@Isl1!0.84!11.41!Isl1;;chr11:96132637..96132652,+!p1@Hoxb9!0.84!5.88!Hoxb9;;chr2:44965856..44965896,-!p5@Zeb2!0.83!23.87!Zeb2;;chr16:43363190..43363242,+!p2@Zbtb20!0.83!18.93!Zbtb20;;chr5:120120667..120120685,+!p3@Tbx3!0.83!11.41!Tbx3;;chr15:102865088..102865107,+!p1@Hoxc4!0.83!7.88!Hoxc4;;chr9:69137716..69137744,+!p1@Rora!0.81!36.92!Rora;;chr15:102828642..102828653,+!p2@Hoxc6!0.81!5.53!Hoxc6;;chr1:19202352..19202354,+!p2@Tfap2b!0.81!5.53!Tfap2b;;chr5:120121446..120121461,+!p2@Tbx3!0.80!18.93!Tbx3;;chr6:52163319..52163342,-!p1@Hoxa3!0.80!8.00!Hoxa3;;chr18:11052456..11052477,+!p3@Gata6!0.79!17.17!Gata6;;chr10:80809447..80809515,-!p5@Hmg20b!0.77!6.11!Hmg20b;;chr10:80555320..80555378,-!p1@Creb3l3!0.77!5.76!Creb3l3;;chr10:88996274..88996286,-!p4@Nr1h4!0.77!4.94!Nr1h4;;chr1:19199236..19199258,+!p1@Tfap2b!0.77!4.82!Tfap2b;;chr4:133109285..133109308,+!p1@Nr0b2!0.77!4.82!Nr0b2;;chr2:74542918..74542971,+!p1@Hoxd8!0.76!7.53!Hoxd8;;chr10:126778916..126778974,-!p1@Gli1!0.75!11.05!Gli1;;chr11:96160360..96160397,+!p3@Hoxb6!0.75!4.59!Hoxb6;;chr6:88148650..88148669,+!p1@Gata2!0.74!42.10!Gata2;;chr18:11052485..11052508,+!p2@Gata6!0.74!13.64!Gata6;;chr2:115890953..115890974,-!p6@Meis2!0.74!7.06!Meis2;;chr12:56700411..56700416,+!p@chr12:56700411..56700416,+!0.74!4.47!Insm2;;chr9:48644037..48644067,-!p2@Zbtb16!0.73!11.88!Zbtb16;;chr2:74549968..74549996,+!p1@Hoxd3!0.72!5.53!Hoxd3;;chr11:98636373..98636387,-!p5@Nr1d1!0.72!4.94!Nr1d1;;chr18:3281725..3281740,-!p3@Crem!0.71!5.41!Crem;;chr5:67490391..67490404,-!p3@Phox2b!0.71!4.12!Phox2b;;chr11:96160426..96160443,+!p2@Hoxb6!0.71!4.12!Hoxb6;;chr7:17647736..17647772,-!p1@Hif3a!0.70!15.87!Hif3a;;chr18:3281750..3281776,-!p2@Crem!0.70!8.82!Crem;;chr6:52167513..52167549,-!p2@Hoxa7!0.70!6.00!Hoxa7;;chr11:96143962..96144035,+!p2@Hoxb8!0.70!4.00!Hoxb8;;chr7:52960555..52960662,+!p1@Dbp!0.69!38.10!Dbp;;chr12:39507404..39507441,+!p4@Etv1!0.69!5.76!Etv1;;chr4:3865501..3865548,-!p1@Plag1!0.68!22.11!Plag1;;chrX:45245679..45245702,-!p1@Smarca1!0.68!19.17!Smarca1;;chr11:52096804..52096896,-!p1@Tcf7!0.67!34.10!Tcf7;;chr4:48058129..48058179,+!p2@Nr4a3!0.67!7.53!Nr4a3;;chr5:120121169..120121171,+!p4@Tbx3!0.67!7.17!Tbx3;;chr15:102820964..102821006,+!p1@Hoxc8!0.67!3.65!Hoxc8;;chr5:120121020..120121049,+!p1@Tbx3!0.66!25.28!Tbx3;;chr6:88143711..88143717,+!p2@Gata2!0.66!6.11!Gata2;;chr18:11052642..11052659,+!p1@Gata6!0.65!19.99!Gata6;;chr3:54559496..54559511,+!p1@Smad9!0.65!8.47!Smad9;;chr10:88145766..88145770,-!p1@Spic!0.65!4.70!Spic;;chr5:32438395..32438406,+!p3@Fosl2!0.64!5.53!Fosl2;;chr15:102865131..102865151,+!p2@Hoxc4!0.64!3.88!Hoxc4;;chr19:37509324..37509337,+!p1@Hhex!0.63!26.93!Hhex;;chr5:125538737..125538781,-!p2@Ncor2!0.63!13.64!Ncor2;;chr3:54559463..54559493,+!p3@Smad9!0.63!6.58!Smad9;;chr7:122989594..122989626,-!p1@Sox6!0.63!3.29!Sox6;;chr16:3847206..3847307,+!p1@Zfp174!0.62!17.76!Zfp174;;chr2:146047829..146047847,+!p1@Insm1!0.62!6.23!Insm1;;chr1:19199021..19199048,+!p8@Tfap2b!0.62!3.17!Tfap2b;;chr13:83643159..83643226,+!p3@Mef2c!0.62!3.17!Mef2c;;chr18:11052606..11052633,+!p4@Gata6!0.61!8.94!Gata6;;chr2:34227446..34227511,-!p1@Pbx3!0.61!7.88!Pbx3;;chr11:96213288..96213332,+!p@chr11:96213288..96213332,+!0.61!5.76!Hoxb2;;chr11:96143843..96143868,+!p3@Hoxb8!0.61!3.06!Hoxb8;;chr2:104966874..104966907,+!p2@Wt1!0.61!3.06!Wt1;;chr2:181501745..181501778,+!p1@Myt1!0.61!3.06!Myt1;;chr15:102820946..102820961,+!p3@Hoxc8!0.61!3.06!Hoxc8;;chr11:96690797..96690813,-!p1@Nfe2l1!0.60!70.08!Nfe2l1;;chr9:68501522..68501538,+!p4@Rora!0.60!6.23!Rora;;chr2:28477452..28477483,-!p1@Gfi1b!0.60!3.88!Gfi1b;;chr8:87425854..87425891,+!p1@Klf1!0.58!2.82!Klf1;;chr11:85646427..85646451,+!p4@Tbx2!0.57!5.29!Tbx2;;chr18:75979866..75979890,+!p3@Zbtb7c!0.56!6.35!Zbtb7c;;chr14:19071466..19071550,-!p1@Nr1d2!0.55!21.75!Nr1d2;;chr2:169458519..169458555,+!p2@Tshz2!0.55!12.70!Tshz2;;chr2:169458838..169458859,+!p4@Tshz2!0.55!5.88!Tshz2;;chr4:99322820..99322845,+!p1@Foxd3!0.55!3.41!Foxd3;;chr11:98636321..98636332,-!p8@Nr1d1!0.55!3.17!Nr1d1;;chr11:96132767..96132796,+!p2@Hoxb9!0.55!2.59!Hoxb9;;chr5:120130377..120130432,+!p10@Tbx3!0.55!2.59!Tbx3;;chr8:109817400..109817417,+!p1@Nfat5!0.54!66.32!Nfat5;;chr12:37835141..37835194,+!p1@Meox2!0.54!9.29!Meox2;;chr2:115891409..115891425,-!p2@Meis2!0.54!8.58!Meis2;;chr2:74529970..74529997,+!p1@Hoxd10!0.54!2.47!Hoxd10;;chr15:76287876..76287894,+!p1@Scx!0.53!16.58!Scx;;chrX:45245644..45245666,-!p2@Smarca1!0.53!9.41!Smarca1;;chr15:103085660..103085681,-!p1@Nfe2!0.53!4.00!Nfe2;;chr5:120121091..120121100,+!p7@Tbx3!0.53!2.94!Tbx3;;chr5:120121262..120121282,+!p6@Tbx3!0.53!2.82!Tbx3;;chr5:35731493..35731531,+!p1@Hmx1!0.53!2.35!Hmx1;;chr2:74550015..74550057,+!p2@Hoxd3!0.53!2.35!Hoxd3;;chr2:104966933..104966966,+!p3@Wt1!0.53!2.35!Wt1;;chr12:39506873..39506913,+!p1@Etv1!0.52!30.57!Etv1;;chr3:95032091..95032183,-!p1@Mllt11!0.52!25.05!Mllt11;;chr7:148452314..148452329,-!p1@Irf7!0.52!20.34!Irf7;;chr5:135582751..135582788,+!p1@Mlxipl!0.52!11.52!Mlxipl;;chr1:52176315..52176343,+!p1@Stat1!0.51!42.10!Stat1;;chr11:85646303..85646329,+!p1@Tbx2!0.51!19.05!Tbx2;;chr9:48644306..48644364,-!p1@Zbtb16!0.51!11.29!Zbtb16;;chr11:5761871..5761882,+!p3@Aebp1!0.51!6.94!Aebp1;;chr2:74536026..74536039,+!p1@Hoxd9!0.51!2.23!Hoxd9;;chr15:102821007..102821021,+!p2@Hoxc8!0.51!2.23!Hoxc8;;chr2:169458192..169458247,+!p1@Tshz2!0.50!25.28!Tshz2;;chr2:25562263..25562314,+!p2@Bmyc!0.50!10.70!Bmyc;;chr12:34642510..34642530,+!p1@Twist1!0.50!8.47!Twist1;;chr2:115890469..115890485,-!p7@Meis2!0.50!3.88!Meis2;;chr2:167514456..167514473,+!p1@Cebpb!0.49!124.88!Cebpb;;chr1:165243792..165243808,-!p1@Prrx1!0.49!9.29!Prrx1;;chr9:96159147..96159204,+!p2@Tfdp2!0.49!4.59!Tfdp2;;chr8:90328310..90328362,-!p3@Zfp423!0.49!2.59!Zfp423;;chr4:150503457..150503498,-!p3@Camta1!0.49!2.47!Camta1;;chr2:34227273..34227292,-!p4@Pbx3!0.49!2.35!Pbx3;;chr1:19202185..19202187,+!p9@Tfap2b!0.49!2.12!Tfap2b;;chr12:30213247..30213333,+!p1@Myt1l!0.49!2.12!Myt1l;;chrX:83437070..83437078,+!p2@Nr0b1!0.49!2.12!Nr0b1;;chr10:77517570..77517581,+!p1@Dnmt3l!0.49!2.12!Dnmt3l;;chr2:74543202..74543213,+!p3@Hoxd8!0.49!2.12!Hoxd8;;chr2:74549945..74549965,+!p4@Hoxd3!0.49!2.12!Hoxd3;;chr7:122989632..122989668,-!p2@Sox6!0.49!2.12!Sox6;;chr6:52190467..52190500,-!p1@Hoxa10!0.49!2.12!Hoxa10;;chr18:3281034..3281104,-!p1@Crem!0.48!18.81!Crem;;chr2:169458352..169458397,+!p3@Tshz2!0.48!6.23!Tshz2;;chr7:77511403..77511450,-!p3@Nr2f2!0.48!5.17!Nr2f2;;chr15:102839912..102839938,+!p5@Hoxc6!0.48!2.00!Hoxc6;;chr1:173144144..173144176,+!p1@Nr1i3!0.48!2.00!Nr1i3;;chr11:96145362..96145389,+!p4@Hoxb7!0.48!2.00!Hoxb7;;chr7:77505617..77505632,-!p1@Nr2f2!0.47!125.35!Nr2f2;;chr10:76424613..76424689,-!p1@Pcbp3!0.47!55.97!Pcbp3;;chr7:77511234..77511302,-!p2@Nr2f2!0.47!17.29!Nr2f2;;chr4:97439519..97439539,+!p11@Nfia!0.47!5.06!Nfia;;chr13:31898637..31898653,+!p2@Foxc1!0.47!4.12!Foxc1;;chr3:54559550..54559570,+!p4@Smad9!0.47!3.17!Smad9;;chr13:44936126..44936164,+!p6@Jarid2!0.47!2.35!Jarid2;;chr1:170362273..170362317,-!p1@Pbx1!0.46!74.90!Pbx1;;chr9:69137672..69137702,+!p2@Rora!0.46!10.70!Rora;;chr2:163028808..163028869,+!p1@Tox2!0.46!8.70!Tox2;;chr9:96653072..96653154,-!p1@Zbtb38!0.46!6.35!Zbtb38;;chr4:48058016..48058032,+!p3@Nr4a3!0.46!3.76!Nr4a3;;chr2:169458799..169458832,+!p5@Tshz2!0.46!3.65!Tshz2;;chr10:86956396..86956411,-!p1@Ascl1!0.46!3.29!Ascl1;;chr9:48644013..48644027,-!p5@Zbtb16!0.46!2.47!Zbtb16;;chr4:48058102..48058110,+!p5@Nr4a3!0.46!2.23!Nr4a3;;chr2:9809357..9809371,-!p2@Gata3!0.46!1.88!Gata3;;chr2:163372884..163372904,+!p1@Hnf4a!0.46!1.88!Hnf4a;;chr11:18918959..18918976,-!p2@Meis1!0.45!34.22!Meis1;;chr17:23004085..23004108,-!p1@Zfp945!0.45!25.05!Zfp945;;chr1:191994550..191994623,-!p1@Prox1!0.45!17.29!Prox1;;chr15:102301130..102301147,+!p3@Pcbp2!0.45!7.17!Pcbp2;;chr15:78994907..78994926,-!p1@Sox10!0.45!5.88!Sox10;;chr16:43363152..43363186,+!p3@Zbtb20!0.45!5.17!Zbtb20;;chr5:134790276..134790294,-!p7@Gtf2i!0.45!5.06!Gtf2i;;chr11:70043257..70043263,-!p1@Bcl6b!0.45!3.76!Bcl6b;;chrX:45245621..45245632,-!p3@Smarca1!0.45!2.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11;;chr6:52114821..52114828,-!p1@Hoxa2!0.24!1.53!Hoxa2;;chr14:67853457..67853482,+!p2@Ebf2!0.24!1.41!Ebf2;;chr7:91558472..91558512,-!p2@Arnt2!0.24!1.41!Arnt2;;chr7:52960730..52960762,+!p3@Dbp!0.24!1.18!Dbp;;chr8:111227455..111227464,+!p@chr8:111227455..111227464,+!0.24!1.18!Zfhx3;;chr9:96159427..96159432,+!p11@Tfdp2!0.24!1.06!Tfdp2;;chr9:63869705..63869713,-!p8@Smad6!0.24!1.06!Smad6;;chr4:107107175..107107204,+!p1@Glis1!0.24!1.06!Glis1;;chr1:93698095..93698113,+!p3@Twist2!0.24!1.06!Twist2;;chr8:123640090..123640101,+!p2@Foxc2!0.24!0.94!Foxc2;;chr12:81213989..81214006,-!p1@Zfp36l1!0.23!79.02!Zfp36l1;;chr9:72122773..72122820,+!p1@Zfp280d!0.23!40.57!Zfp280d;;chr18:14131126..14131211,-!p1@Zfp521!0.23!32.34!Zfp521;;chr13:55206651..55206701,+!p1@Zfp346!0.23!27.40!Zfp346;;chr19:53403914..53403968,+!p2@Mxi1!0.23!16.58!Mxi1;;chr2:160698681..160698708,-!p2@Zhx3!0.23!11.64!Zhx3;;chr14:56223010..56223067,+!p1@Irf9!0.23!11.41!Irf9;;chr5:145962698..145962742,-!p1@Zkscan14!0.23!6.35!Zkscan14;;chr1:186556410..186556424,-!p1@Hlx!0.23!4.00!Hlx;;chr2:91864300..91864379,-!p2@Creb3l1!0.23!3.65!Creb3l1;;chrX:103123886..103123922,-!p3@Atrx!0.23!3.29!Atrx;;chr7:30691543..30691586,-!p2@Zfp27!0.23!2.70!Zfp27;;chr1:120950098..120950132,-!p2@Gli2!0.23!2.70!Gli2;;chr13:112476433..112476448,+!p2@Mier3!0.23!2.12!Mier3;;chr15:40486754..40486771,+!p2@Zfpm2!0.23!1.88!Zfpm2;;chr11:106993257..106993268,-!p4@Bptf!0.23!1.88!Bptf;;chr4:54960713..54960727,+!p7@Zfp462!0.23!1.65!Zfp462;;chr15:103170561..103170572,-!p4@Zfp385a!0.23!1.41!Zfp385a;;chr8:94325486..94325510,-!p4@Irx3!0.23!1.18!Irx3;;chr6:16848347..16848391,-!p1@Tfec!0.23!1.18!Tfec;;chr4:128483422..128483430,-!p6@Zfp362!0.23!1.06!Zfp362;;chr19:59533221..59533271,+!p1@Emx2!0.23!1.06!Emx2;;chrX:110411840..110411860,+!p1@Dach2!0.23!1.06!Dach2;;chr7:53631837..53631850,+!p1@Myod1!0.23!0.71!Myod1;;chr8:90328289..90328301,-!p4@Zfp423!0.23!0.71!Zfp423;;chr2:9809374..9809396,-!p4@Gata3!0.23!0.71!Gata3;;chr3:99057677..99057730,+!p2@Tbx15!0.23!0.71!Tbx15;;chr4:89354729..89354776,+!p1@Dmrta1!0.23!0.71!Dmrta1;;chr5:67490447..67490458,-!p7@Phox2b!0.23!0.71!Phox2b;;chr6:88148324..88148328,+!p3@Gata2!0.23!0.71!Gata2;;chr19:25580226..25580261,+!p2@Dmrt1!0.23!0.71!Dmrt1;;chrX:95345005..95345053,+!p1@Ar!0.23!0.71!Ar;;chr1:186556307..186556318,-!p7@Hlx!0.23!0.71!Hlx;;chr2:17976830..17976848,+!p12@Mllt10!0.23!0.71!Mllt10;;chr1:19199064..19199075,+!p10@Tfap2b!0.23!0.71!Tfap2b;;chr1:173144100..173144138,+!p2@Nr1i3!0.23!0.71!Nr1i3;;chr2:115874845..115874865,-!p20@Meis2!0.23!0.71!Meis2;;chr2:163028876..163028885,+!p7@Tox2!0.23!0.71!Tox2;;chr11:33103600..33103611,-!p2@Tlx3!0.23!0.71!Tlx3;;chr10:5734677..5734702,-!p4@Esr1!0.23!0.71!Esr1;;chr10:30375647..30375658,-!p7@Ncoa7!0.23!0.71!Ncoa7;;chr11:90252108..90252134,-!p6@Hlf!0.23!0.71!Hlf;;chr11:96164821..96164865,+!p1@Hoxb5!0.23!0.71!Hoxb5;;chr14:17407857..17407875,-!p4@Rarb!0.23!0.71!Rarb;;chr15:103082088..103082136,-!p2@Nfe2!0.23!0.71!Nfe2;;chr15:57907747..57907798,-!p1@9130401M01Rik,p1@Zhx1!0.22!39.27!Zhx1;;chr8:28087609..28087634,+!p1@Zfp703!0.22!34.10!Zfp703;;chr8:118231723..118231740,-!p1@Maf!0.22!32.81!Maf;;chr16:50432467..50432522,-!p1@Bbx!0.22!28.81!Bbx;;chr5:53981912..53981942,+!p1@Rbpj!0.22!28.81!Rbpj;;chr9:20264394..20264448,-!p1@Zfp26!0.22!26.34!Zfp26;;chr15:100058266..100058287,+!p1@Atf1!0.22!23.40!Atf1;;chr17:84105551..84105600,+!p1@Mta3!0.22!16.46!Mta3;;chr4:133276801..133276891,-!p3@Arid1a!0.22!15.17!Arid1a;;chr10:13685899..13685916,+!p1@Hivep2!0.22!15.17!Hivep2;;chr6:72739185..72739232,-!p1@Tcf7l1!0.22!14.93!Tcf7l1;;chr4:129055091..129055168,-!p1@Zbtb8a!0.22!8.11!Zbtb8a;;chr18:35721834..35721851,+!p2@Matr3!0.22!7.17!Matr3;;chr4:119406389..119406411,+!p1@Hivep3!0.22!6.70!Hivep3;;chr13:99954640..99954681,+!p1@Zfp366!0.22!4.70!Zfp366;;chr2:168032763..168032802,-!p3@Adnp!0.22!4.47!Adnp;;chr2:133377954..133377973,+!p1@Bmp2!0.22!4.00!Bmp2;;chr2:27532734..27532749,+!p2@Rxra!0.22!3.53!Rxra;;chr6:133985971..133985991,+!p6@Etv6!0.22!3.29!Etv6;;chrX:35542909..35542927,+!p4@Zbtb33!0.22!3.06!Zbtb33;;chr1:52176406..52176433,+!p2@Stat1!0.22!2.94!Stat1;;chr9:32349240..32349276,-!p2@Fli1!0.22!2.82!Fli1;;chr2:44965662..44965685,-!p9@Zeb2!0.22!2.70!Zeb2;;chr12:78063057..78063070,-!p3@Max!0.22!2.35!Max;;chr16:23988686..23988693,-!p2@Bcl6!0.22!2.23!Bcl6;;chr2:148506935..148506954,+!p2@Gzf1!0.22!2.23!Gzf1;;chr8:94881733..94881790,+!p1@Irx5!0.22!2.12!Irx5;;chr6:92041489..92041500,+!p4@Nr2c2!0.22!1.88!Nr2c2;;chr2:91864449..91864492,-!p3@Creb3l1!0.22!1.65!Creb3l1;;chr3:30993859..30993870,+!p5@Skil!0.22!1.41!Skil;;chr14:65977415..65977426,+!p6@Zfp395!0.22!1.41!Zfp395;;chr19:25746898..25746910,+!p1@Dmrt2!0.22!1.41!Dmrt2;;chr7:134169648..134169657,-!p14@Maz!0.22!1.29!Maz;;chr1:87546583..87546595,+!p1@Sp100!0.22!1.29!Sp100;;chr19:9018049..9018054,+!p5@Mta2!0.22!1.18!Mta2;;chr5:108494765..108494786,+!p2@Mtf2!0.22!1.18!Mtf2;;chr19:23216166..23216191,+!p6@Klf9!0.22!1.18!Klf9;;chr8:111227354..111227401,+!p@chr8:111227354..111227401,+!0.22!1.18!Zfhx3;;chr6:128250380..128250442,-!p2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Hhex!0.20!0.59!Hhex;;chrX:58146612..58146615,-!p1@Sox3!0.20!0.59!Sox3;;chrX:35232210..35232214,-!p1@Rhox8!0.20!0.59!Rhox8;;chr7:17642177..17642223,-!p3@Hif3a!0.20!0.59!Hif3a;;chr5:67490333..67490342,-!p5@Phox2b!0.20!0.59!Phox2b;;chr7:147129712..147129774,+!p1@Utf1!0.20!0.59!Utf1;;chr6:52158644..52158677,-!p2@Hoxa6!0.20!0.59!Hoxa6;;chr4:40917988..40918060,+!p1@Nfx1!0.19!95.25!Nfx1;;chr10:126727842..126727859,+!p1@Ddit3!0.19!39.86!Ddit3;;chr13:83663902..83663927,+!p1@Mef2c!0.19!33.75!Mef2c;;chr1:64167972..64168026,-!p1@Klf7!0.19!32.34!Klf7;;chr13:83663868..83663894,+!p2@Mef2c!0.19!19.75!Mef2c;;chr1:136456734..136456757,+!p3@Kdm5b!0.19!16.82!Kdm5b;;chr4:122911086..122911112,+!p1@Heyl!0.19!15.64!Heyl;;chrX:98449492..98449510,+!p1@Foxo4!0.19!14.11!Foxo4;;chr12:86940338..86940357,+!p1@Jdp2!0.19!13.05!Jdp2;;chr10:20032304..20032324,+!p2@Bclaf1!0.19!12.70!Bclaf1;;chr15:99532568..99532636,+!p2@Smarcd1!0.19!12.11!Smarcd1;;chr4:97444012..97444045,+!p4@Nfia!0.19!10.00!Nfia;;chr19:46380172..46380231,+!p2@Nfkb2!0.19!8.82!Nfkb2;;chr11:98821749..98821799,+!p2@Rara!0.19!8.11!Rara;;chr7:31741761..31741800,-!p2@LOC100504922,p2@Usf2!0.19!8.00!Usf2;;chr7:6238191..6238224,+!p1@Zfp667!0.19!7.64!Zfp667;;chr12:100631123..100631206,-!p3@Foxn3!0.19!7.29!Foxn3;;chr13:56804721..56804792,+!p2@Smad5!0.19!6.47!Smad5;;chr5:92391901..92391936,+!p1@Thap6!0.19!6.11!Thap6;;chr6:90412582..90412601,+!p1@Klf15!0.19!5.88!Klf15;;chr13:21545538..21545569,-!p2@Zfp187!0.19!5.64!Zfp187;;chr14:22807107..22807119,-!p2@Zfp503!0.19!5.41!Zfp503;;chr6:118405493..118405536,-!p1@Zfp248!0.19!4.59!Zfp248;;chr3:51081199..51081228,-!p3@Elf2!0.19!4.23!Elf2;;chr13:15555079..15555136,+!p3@Gli3!0.19!3.65!Gli3;;chr5:22940320..22940331,+!p2@Mll5!0.19!3.41!Mll5;;chr1:186556323..186556370,-!p2@Hlx!0.19!3.06!Hlx;;chr16:3744162..3744180,+!p2@Zfp263!0.19!3.06!Zfp263;;chr7:50568466..50568486,-!p2@Zfp715!0.19!2.94!Zfp715;;chr4:97444261..97444272,+!p9@Nfia!0.19!2.47!Nfia;;chr8:94325814..94325839,-!p2@Irx3!0.19!2.12!Irx3;;chr4:126700650..126700678,+!p5@Sfpq!0.19!2.00!Sfpq;;chr4:97444563..97444572,+!p12@Nfia!0.19!2.00!Nfia;;chr14:76814883..76814898,+!p9@Tsc22d1!0.19!2.00!Tsc22d1;;chr18:76400986..76401016,+!p5@Smad2!0.19!1.88!Smad2;;chr15:61818965..61819046,+!p3@Myc!0.19!1.65!Myc;;chr9:122775033..122775044,-!p2@Zfp445!0.19!1.65!Zfp445;;chr8:92872177..92872201,-!p2@Tox3!0.19!1.65!Tox3;;chr17:21626055..21626081,+!p2@Zfp53!0.19!1.53!Zfp53;;chr18:69681483..69681514,+!p11@Tcf4!0.19!1.53!Tcf4;;chr16:95923651..95923701,+!p3@Ets2!0.19!1.41!Ets2;;chrX:137077682..137077692,-!p5@Tsc22d3!0.19!1.41!Tsc22d3;;chr5:138188113..138188145,+!p9@Tsc22d4!0.19!1.41!Tsc22d4;;chr11:98789140..98789168,+!p5@Rara!0.19!1.41!Rara;;chr13:53076382..53076393,-!p2@Nfil3!0.19!1.41!Nfil3;;chr14:67853425..67853454,+!p1@Ebf2!0.19!1.18!Ebf2;;chr5:125659510..125659517,-!p3@Ncor2!0.19!1.18!Ncor2;;chr7:51787434..51787448,-!p1@Spib!0.19!1.18!Spib;;chr11:87881881..87881887,+!p5@Vezf1!0.19!1.18!Vezf1;;chr5:65213459..65213485,+!p12@Klf3!0.19!0.94!Klf3;;chr7:77511622..77511657,-!p5@Nr2f2!0.19!0.94!Nr2f2;;chr4:55545051..55545110,-!p2@Klf4!0.19!0.94!Klf4;;chr14:32979290..32979309,+!p3@Gm6768,p3@Ncoa4!0.19!0.82!Ncoa4;;chr13:29045174..29045188,-!p7@Sox4!0.19!0.82!Sox4;;chrX:137077636..137077647,-!p7@Tsc22d3!0.19!0.82!Tsc22d3;;chr2:74550178..74550214,+!p5@Hoxd3!0.19!0.71!Hoxd3;;chr3:133207232..133207277,-!p1@Tet2!0.18!37.39!Tet2;;chr12:110031495..110031585,+!p1@Yy1!0.18!34.92!Yy1;;chr3:51081233..51081365,-!p1@Elf2!0.18!28.22!Elf2;;chr7:148513456..148513506,-!p1@Deaf1!0.18!20.81!Deaf1;;chr4:117354838..117354884,-!p1@Dmap1!0.18!18.70!Dmap1;;chr3:9610090..9610124,-!p1@Zfp704!0.18!17.76!Zfp704;;chr16:4594683..4594735,+!p2@Glis2!0.18!17.05!Glis2;;chr10:119913310..119913366,-!p1@Hmga2!0.18!10.11!Hmga2;;chr11:50641183..50641244,-!p1@Zfp354c!0.18!10.00!Zfp354c;;chr12:84828663..84828679,-!p1@Dpf3!0.18!10.00!Dpf3;;chr6:120314411..120314466,+!p2@Kdm5a!0.18!9.17!Kdm5a;;chr18:24178808..24178865,-!p2@Zfp191!0.18!6.58!Zfp191;;chr17:84105510..84105540,+!p2@Mta3!0.18!6.58!Mta3;;chr8:72663347..72663398,+!p2@2310045N01Rik,p2@Mef2b!0.18!6.35!Mef2b;;chr16:33380881..33380909,+!p1@Zfp148!0.18!5.29!Zfp148;;chr2:73730619..73730630,-!p4@Atf2,p4@LOC100047997!0.18!5.06!Atf2;;chr5:9160908..9160912,-!p2@Dmtf1!0.18!4.94!Dmtf1;;chr7:4866835..4866858,+!p2@Zfp628!0.18!4.47!Zfp628;;chr15:99532528..99532550,+!p3@Smarcd1!0.18!4.12!Smarcd1;;chr14:79881330..79881415,+!p3@Elf1!0.18!3.76!Elf1;;chr6:134780234..134780288,+!p1@Crebl2!0.18!3.65!Crebl2;;chr7:119822828..119822839,+!p4@Tead1!0.18!3.17!Tead1;;chr1:138521510..138521526,+!p2@Zfp281!0.18!3.17!Zfp281;;chr13:22036953..22037009,+!p1@Zfp184!0.18!2.82!Zfp184;;chr19:5912834..5912852,-!p2@Dpf2!0.18!2.70!Dpf2;;chr11:96690779..96690790,-!p3@Nfe2l1!0.18!2.47!Nfe2l1;;chr16:43619101..43619151,+!p6@Zbtb20!0.18!2.47!Zbtb20;;chr10:119913278..119913298,-!p2@Hmga2!0.18!2.23!Hmga2;;chr17:27693746..27693759,+!p6@Hmga1-rs1,p7@Hmga1!0.18!1.88!Hmga1;;chr6:39068163..39068176,-!p2@Parp12!0.18!1.76!Parp12;;chr6:108610766..108610781,+!p2@Bhl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;;chr4:97444557..97444558,+!p23@Nfia!0.17!0.47!Nfia;;chr4:84321317..84321332,-!p4@Bnc2!0.17!0.47!Bnc2;;chr2:74536071..74536083,+!p4@Hoxd9!0.17!0.47!Hoxd9;;chr4:114581497..114581519,-!p2@Foxd2!0.17!0.47!Foxd2;;chr2:74560109..74560131,+!p1@Hoxd4!0.17!0.47!Hoxd4;;chr2:74543103..74543135,+!p4@Hoxd8!0.17!0.47!Hoxd8;;chr11:96213183..96213188,+!p@chr11:96213183..96213188,+!0.17!0.47!Hoxb2;;chr11:100553754..100553787,-!p1@Zfp385c!0.17!0.47!Zfp385c;;chr11:84339016..84339044,-!p1@Lhx1!0.17!0.47!Lhx1;;chr10:106923133..106923146,-!p1@Myf5!0.17!0.47!Myf5;;chr10:102491237..102491291,-!p2@Alx1!0.17!0.47!Alx1;;chr10:5636354..5636373,-!p2@Esr1!0.17!0.47!Esr1;;chr10:106931803..106931817,-!p2@Myf6!0.17!0.47!Myf6;;chr11:53164494..53164501,+!p10@Aff4!0.17!0.47!Aff4;;chr10:30375559..30375568,-!p9@Ncoa7!0.17!0.47!Ncoa7;;chr11:52074095..52074127,-!p8@Tcf7!0.17!0.47!Tcf7;;chr11:100720767..100720797,+!p4@Stat5a!0.17!0.47!Stat5a;;chr11:98407234..98407259,-!p2@Ikzf3!0.17!0.47!Ikzf3;;chr11:90250999..90251013,-!p8@Hlf!0.17!0.47!Hlf;;chr14:65568675..65568723,-!p1@Hmbox1!0.16!42.68!Hmbox1;;chr4:97444471..97444514,+!p1@Nfia!0.16!34.22!Nfia;;chr11:60034052..60034134,-!p2@Srebf1!0.16!30.57!Srebf1;;chr12:86814833..86814846,+!p1@Fos!0.16!29.87!Fos;;chr2:48805082..48805137,+!p1@Mbd5!0.16!26.58!Mbd5;;chr10:33670996..33671069,-!p1@Zufsp!0.16!25.05!Zufsp;;chr3:51144550..51144603,-!p2@Elf2!0.16!19.17!Elf2;;chr10:30522881..30522960,-!p1@Ncoa7!0.16!15.05!Ncoa7;;chr11:59319701..59319741,-!p1@Zkscan17!0.16!14.46!Zkscan17;;chr15:102076870..102076941,-!p1@Rarg!0.16!13.64!Rarg;;chr15:96117968..96118035,+!p1@Arid2!0.16!11.52!Arid2;;chr5:24107779..24107825,-!p1@Smarcd3!0.16!8.11!Smarcd3;;chr8:72520015..72520053,-!p2@Gatad2a!0.16!8.11!Gatad2a;;chr7:134170660..134170711,-!p6@Maz!0.16!6.70!Maz;;chr13:67585161..67585205,-!p1@Zfp874b!0.16!6.11!Zfp874b;;chr14:100683672..100683717,-!p1@Klf12!0.16!5.41!Klf12;;chr17:84587167..84587239,-!p2@Zfp36l2!0.16!3.65!Zfp36l2;;chrX:45807450..45807478,-!p3@Elf4!0.16!3.65!Elf4;;chr18:83080231..83080254,+!p3@Zfp516!0.16!3.53!Zfp516;;chr7:88138532..88138543,+!p3@Zfp592!0.16!2.94!Zfp592;;chr4:126703093..126703158,+!p3@Sfpq!0.16!2.94!Sfpq;;chr11:59285966..59285990,-!p2@Zfp867!0.16!2.59!Zfp867;;chr1:181476392..181476407,-!p2@Tfb2m!0.16!2.59!Tfb2m;;chr6:134780163..134780197,+!p2@Crebl2!0.16!2.23!Crebl2;;chr10:26093876..26093894,-!p2@L3mbtl3!0.16!2.23!L3mbtl3;;chr1:172797876..172797887,-!p5@Atf6!0.16!2.12!Atf6;;chr4:58956447..58956510,+!p1@Zkscan16!0.16!2.00!Zkscan16;;chr5:22939771..22939797,+!p4@Mll5!0.16!2.00!Mll5;;chr6:90412608..90412630,+!p2@Klf15!0.16!1.88!Klf15;;chr15:98701606..98701618,-!p1@Mll2!0.16!1.53!Mll2;;chr15:100058358..100058374,+!p2@Gm1862,p4@Atf1!0.16!1.53!Atf1;;chr11:101755669..101755686,-!p1@Meox1!0.16!1.53!Meox1;;chr10:80600465..80600489,+!p7@Zbtb7a!0.16!1.41!Zbtb7a;;chr3:5218590..5218614,+!p3@Zfhx4!0.16!1.41!Zfhx4;;chr7:30092993..30093076,+!p1@Dpf1!0.16!1.41!Dpf1;;chr10:67599432..67599444,-!p4@Arid5b!0.16!1.29!Arid5b;;chr5:134741947..134741948,-!p9@Gtf2i!0.16!1.18!Gtf2i;;chr19:23216132..23216157,+!p3@Klf9!0.16!1.18!Klf9;;chr16:3872255..3872283,-!p4@Zfp597!0.16!1.06!Zfp597;;chr14:52935860..52935874,-!p3@Sall2!0.16!1.06!Sall2;;chr4:87679181..87679192,-!p10@Mllt3!0.16!1.06!Mllt3;;chr17:37139432..37139444,+!p4@Zfp57!0.16!0.94!Zfp57;;chr2:30700857..30700873,+!p3@Prrx2!0.16!0.94!Prrx2;;chr2:115890294..115890334,-!p9@Meis2!0.16!0.94!Meis2;;chr15:10391745..10391753,-!p3@Dnajc21!0.16!0.82!Dnajc21;;chrX:137077699..137077705,-!p8@Tsc22d3!0.16!0.82!Tsc22d3;;chr9:51021788..51021802,+!p1@Pou2af1!0.16!0.71!Pou2af1;;
@@ Line 42: / Line 44: @@
 |is_a=EFO:0002091;;FF:0011505
 |is_obsolete=
-|library_ids=CNhs11191
+|library_id=CNhs11191
+|library_id_phase_based=2:CNhs11191
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;1311
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;1311
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520neonate%2520N00.CNhs11191.1311-23C1.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520neonate%2520N00.CNhs11191.1311-23C1.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520neonate%2520N00.CNhs11191.1311-23C1.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520neonate%2520N00.CNhs11191.1311-23C1.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520neonate%2520N00.CNhs11191.1311-23C1.mm9.nobarcode.rdna.fa.gz
 |name=adrenal gland, neonate N00
 |namespace=FANTOM5
@@ Line 48: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11191,LSID746,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
 |repeat_enrich_byfamily=0.144834219696856,0.0482820047261801,0,0,0,0.0482820047261801,0.453153962726431,0.0482820047261801,0.0458646709052479,0,0.0482820047261801,0.781935701047537,0,0,0,0,0,0,0.267713112041987,0,0,0,0,0,0.0482820047261801,0,0.0187466613493796,0,0,0,0,0,0.140374853465507,0,0,0,0.0482820047261801,0.0482820047261801,0.158746209786051,0.0572345534531392,-0.0764185042613095,0.865392926077344,-0.138645919729198,0,0,0,0,0,0,0,0,0,0,0.568734319429033,0.20083505566084,0.165854386525293,0.0482820047261801,0,0,0,0.0257174514882157,0,0.146666190258824,0.0482820047261801,0.0917293418104957,0.0642556352731647,0.0947965296798725,0.183029953104737,0.694060224829853,0.250798914142918,0,0.0541721225967525,0.0482249838040897,0,0.0917293418104957,0,0.0624352148020693,0.0618248544186398,-0.154403458783739,0.0523911234412454,0,0,0,0,0.02414100236309,0,-0.0346982886884304,0.0804565358948519,0.0906911556560532,0.0482820047261801,0,0.0482820047261801,0,0
@@ Line 85: / Line 97: @@
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 |xref=
-}} {{DRAAccessionNumbers
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:1311-23C1;search_select_hide=table117:1311-23C1
-|DRA_sample_Accession=CAGE@DRS008795
-|accession_numbers=DRX008932;DRR009806;DRZ001231;DRZ002614;CAGE
-|library_id=CNhs11191
 }}

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Latest revision as of 18:51, 4 June 2020

CNhs11191

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0