FFCP PHASE1:Mm9::chr19:23833502..23833515,+: Difference between revisions
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{{FFCP|EntrezGene=319924|HGNC=|MCL_coexpression_id=2|UniProt=Q3UH49,Q8BMF2,Q3UH26|association_with_transcript=136bp_to_ENSMUST00000025830,NM_177034,uc008hai.1,uc012bjp.1_5end|description=CAGE_peak_4_at_Apba1_5end|id=chr19:23833502..23833515,+|ontology_enrichment_celltype=CL:0000117!4.79e-13!23;CL:0000337!4.79e-13!23;CL:0000540!8.66e-09!33;CL:0000047!8.66e-09!33;CL:0000031!8.66e-09!33;CL:0000404!8.66e-09!33;CL:0000221!5.46e-07!44;CL:0000133!5.46e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,4.96e-12,23;CL:0000337,4.96e-12,23;CL:0002610,2.71e-10,3;CL:0002614,4.19e-10,3;CL:0000540,7.32e-08,33;CL:0000047,7.32e-08,33;CL:0000031,7.32e-08,33;CL:0000404,7.32e-08,33;CL:0002611,2.45e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.60e-25!52;UBERON:0005068!3.60e-25!52;UBERON:0006241!3.60e-25!52;UBERON:0007135!3.60e-25!52;UBERON:0001017!4.07e-25!73;UBERON:0005743!4.07e-25!73;UBERON:0002346!4.05e-24!71;UBERON:0003075!4.05e-24!71;UBERON:0007284!4.05e-24!71;UBERON:0000073!6.46e-24!75;UBERON:0001016!6.46e-24!75;UBERON:0000955!1.31e-23!50;UBERON:0006238!1.31e-23!50;UBERON:0004121!1.59e-23!102;UBERON:0000924!1.59e-23!102;UBERON:0006601!1.59e-23!102;UBERON:0002616!8.92e-23!49;UBERON:0000033!2.39e-22!63;UBERON:0002020!9.47e-22!34;UBERON:0003080!2.52e-18!40;UBERON:0002780!1.83e-17!39;UBERON:0001890!1.83e-17!39;UBERON:0006240!1.83e-17!39;UBERON:0002791!2.34e-17!29;UBERON:0003528!2.34e-17!29;UBERON:0001893!2.34e-17!29;UBERON:0003056!2.70e-17!49;UBERON:0000956!1.12e-12!21;UBERON:0001869!1.12e-12!21;UBERON:0000203!1.12e-12!21;UBERON:0007811!1.63e-12!86;UBERON:0002021!1.97e-11!10;UBERON:0000411!1.97e-11!10;UBERON:0001950!1.97e-11!10;UBERON:0002619!1.59e-10!17;UBERON:0000153!3.91e-10!94;UBERON:0000025!3.54e-08!114;UBERON:0004111!3.68e-08!122;UBERON:0003076!2.03e-07!12;UBERON:0003057!2.03e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.67e-36,54;UBERON:0002021,4.31e-33,10;UBERON:0000411,4.31e-33,10;UBERON:0001950,4.31e-33,10;UBERON:0002020,1.60e-31,34;UBERON:0001049,4.65e-29,52;UBERON:0005068,4.65e-29,52;UBERON:0006241,4.65e-29,52;UBERON:0007135,4.65e-29,52;UBERON:0001017,8.11e-26,73;UBERON:0001016,5.25e-25,75;UBERON:0002346,5.53e-25,64;UBERON:0003075,5.53e-25,64;UBERON:0007284,5.53e-25,64;UBERON:0003528,3.34e-23,29;UBERON:0002791,3.34e-23,29;UBERON:0001893,3.34e-23,29;UBERON:0002619,1.58e-22,17;UBERON:0002616,3.31e-22,46;UBERON:0000955,1.19e-21,47;UBERON:0006238,1.19e-21,47;UBERON:0010371,2.38e-21,73;UBERON:0000956,3.14e-21,21;UBERON:0001869,3.14e-21,21;UBERON:0000203,3.14e-21,21;UBERON:0003080,8.55e-21,40;UBERON:0004121,1.83e-20,95;UBERON:0000924,1.83e-20,95;UBERON:0006601,1.83e-20,95;UBERON:0002780,7.21e-19,39;UBERON:0001890,7.21e-19,39;UBERON:0006240,7.21e-19,39;UBERON:0003056,2.16e-18,49;UBERON:0010314,5.28e-16,92;UBERON:0002950,7.32e-13,4;UBERON:0001891,7.32e-13,4;UBERON:0009616,7.32e-13,4;UBERON:0010286,7.32e-13,4;UBERON:0000025,7.78e-11,114;UBERON:0004684,2.71e-10,3;UBERON:0002275,2.71e-10,3;UBERON:0001948,3.63e-10,5;UBERON:0002315,3.63e-10,5;UBERON:0002038,4.19e-10,3;UBERON:0009663,4.19e-10,3;UBERON:0009661,4.19e-10,3;UBERON:0000125,4.19e-10,3;UBERON:0002308,4.19e-10,3;UBERON:0004111,7.93e-10,122;UBERON:0003076,1.10e-08,12;UBERON:0003057,1.10e-08,12;UBERON:0002240,1.73e-08,6;UBERON:0005174,1.73e-08,6;UBERON:0001137,1.73e-08,6;UBERON:0002256,2.45e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.270011876663381,0.210324961351382,3.14216082844184,1.32521124570968,0.489963196859816,0.287536413054709,0,1.10115880999389,2.68143409978894,3.37934373163736,0.527545150920775,0.457438218012048,0,2.51264699101243,1.12552522006336,2.59757021220577,1.76777151284201,1.56608848879013,0.745597783301202,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,1.25668024088073,0.255457055208591,0,0.599902730993408,0,1.79748767285787,0.915001205637253,0.879580464790051,2.08589184230732,1.79000820131231,2.0778804455956,0.811206315338788,0,0,0,0.420883711772948,0,0,0,0,0.204109497453984,0.2562274405697,0,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0.0810688095458557,0,0.219550115291051,0,1.89260953707715,0.308713837137853,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,1.76605648986571,0.820481806145422,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0,0.329098041204242,0,0,0,0.220528398054962,0,0,0.120625849856312,0.238744688006273,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0.167884616364078,0,0,0.183151624267265,0,0,5.64751842617067,2.76195141904306,7.44764167471216,6.35856774671644,4.11049511862385,2.2661816921691,6.75022500231806,1.80128481289688,5.43770890781046,2.5888015587591,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0,0.384150914429216,0,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p4@Apba1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319924 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UH49,Q8BMF2,Q3UH26 | |||
|association_with_transcript=136bp_to_ENSMUST00000025830,NM_177034,uc008hai.1,uc012bjp.1_5end | |||
|cluster_id=chr19:23833502..23833515,+ | |||
|description=CAGE_peak_4_at_Apba1_5end | |||
|id=chr19:23833502..23833515,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.79e-13!23;CL:0000337!4.79e-13!23;CL:0000540!8.66e-09!33;CL:0000047!8.66e-09!33;CL:0000031!8.66e-09!33;CL:0000404!8.66e-09!33;CL:0000221!5.46e-07!44;CL:0000133!5.46e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.96e-12,23;CL:0000337,4.96e-12,23;CL:0002610,2.71e-10,3;CL:0002614,4.19e-10,3;CL:0000540,7.32e-08,33;CL:0000047,7.32e-08,33;CL:0000031,7.32e-08,33;CL:0000404,7.32e-08,33;CL:0002611,2.45e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.60e-25!52;UBERON:0005068!3.60e-25!52;UBERON:0006241!3.60e-25!52;UBERON:0007135!3.60e-25!52;UBERON:0001017!4.07e-25!73;UBERON:0005743!4.07e-25!73;UBERON:0002346!4.05e-24!71;UBERON:0003075!4.05e-24!71;UBERON:0007284!4.05e-24!71;UBERON:0000073!6.46e-24!75;UBERON:0001016!6.46e-24!75;UBERON:0000955!1.31e-23!50;UBERON:0006238!1.31e-23!50;UBERON:0004121!1.59e-23!102;UBERON:0000924!1.59e-23!102;UBERON:0006601!1.59e-23!102;UBERON:0002616!8.92e-23!49;UBERON:0000033!2.39e-22!63;UBERON:0002020!9.47e-22!34;UBERON:0003080!2.52e-18!40;UBERON:0002780!1.83e-17!39;UBERON:0001890!1.83e-17!39;UBERON:0006240!1.83e-17!39;UBERON:0002791!2.34e-17!29;UBERON:0003528!2.34e-17!29;UBERON:0001893!2.34e-17!29;UBERON:0003056!2.70e-17!49;UBERON:0000956!1.12e-12!21;UBERON:0001869!1.12e-12!21;UBERON:0000203!1.12e-12!21;UBERON:0007811!1.63e-12!86;UBERON:0002021!1.97e-11!10;UBERON:0000411!1.97e-11!10;UBERON:0001950!1.97e-11!10;UBERON:0002619!1.59e-10!17;UBERON:0000153!3.91e-10!94;UBERON:0000025!3.54e-08!114;UBERON:0004111!3.68e-08!122;UBERON:0003076!2.03e-07!12;UBERON:0003057!2.03e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.67e-36,54;UBERON:0002021,4.31e-33,10;UBERON:0000411,4.31e-33,10;UBERON:0001950,4.31e-33,10;UBERON:0002020,1.60e-31,34;UBERON:0001049,4.65e-29,52;UBERON:0005068,4.65e-29,52;UBERON:0006241,4.65e-29,52;UBERON:0007135,4.65e-29,52;UBERON:0001017,8.11e-26,73;UBERON:0001016,5.25e-25,75;UBERON:0002346,5.53e-25,64;UBERON:0003075,5.53e-25,64;UBERON:0007284,5.53e-25,64;UBERON:0003528,3.34e-23,29;UBERON:0002791,3.34e-23,29;UBERON:0001893,3.34e-23,29;UBERON:0002619,1.58e-22,17;UBERON:0002616,3.31e-22,46;UBERON:0000955,1.19e-21,47;UBERON:0006238,1.19e-21,47;UBERON:0010371,2.38e-21,73;UBERON:0000956,3.14e-21,21;UBERON:0001869,3.14e-21,21;UBERON:0000203,3.14e-21,21;UBERON:0003080,8.55e-21,40;UBERON:0004121,1.83e-20,95;UBERON:0000924,1.83e-20,95;UBERON:0006601,1.83e-20,95;UBERON:0002780,7.21e-19,39;UBERON:0001890,7.21e-19,39;UBERON:0006240,7.21e-19,39;UBERON:0003056,2.16e-18,49;UBERON:0010314,5.28e-16,92;UBERON:0002950,7.32e-13,4;UBERON:0001891,7.32e-13,4;UBERON:0009616,7.32e-13,4;UBERON:0010286,7.32e-13,4;UBERON:0000025,7.78e-11,114;UBERON:0004684,2.71e-10,3;UBERON:0002275,2.71e-10,3;UBERON:0001948,3.63e-10,5;UBERON:0002315,3.63e-10,5;UBERON:0002038,4.19e-10,3;UBERON:0009663,4.19e-10,3;UBERON:0009661,4.19e-10,3;UBERON:0000125,4.19e-10,3;UBERON:0002308,4.19e-10,3;UBERON:0004111,7.93e-10,122;UBERON:0003076,1.10e-08,12;UBERON:0003057,1.10e-08,12;UBERON:0002240,1.73e-08,6;UBERON:0005174,1.73e-08,6;UBERON:0001137,1.73e-08,6;UBERON:0002256,2.45e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.270011876663381,0.210324961351382,3.14216082844184,1.32521124570968,0.489963196859816,0.287536413054709,0,1.10115880999389,2.68143409978894,3.37934373163736,0.527545150920775,0.457438218012048,0,2.51264699101243,1.12552522006336,2.59757021220577,1.76777151284201,1.56608848879013,0.745597783301202,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,1.25668024088073,0.255457055208591,0,0.599902730993408,0,1.79748767285787,0.915001205637253,0.879580464790051,2.08589184230732,1.79000820131231,2.0778804455956,0.811206315338788,0,0,0,0.420883711772948,0,0,0,0,0.204109497453984,0.2562274405697,0,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0.0810688095458557,0,0.219550115291051,0,1.89260953707715,0.308713837137853,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,1.76605648986571,0.820481806145422,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0,0.329098041204242,0,0,0,0.220528398054962,0,0,0.120625849856312,0.238744688006273,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0.167884616364078,0,0,0.183151624267265,0,0,5.64751842617067,2.76195141904306,7.44764167471216,6.35856774671644,4.11049511862385,2.2661816921691,6.75022500231806,1.80128481289688,5.43770890781046,2.5888015587591,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0,0.384150914429216,0,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p4@Apba1 | |||
}} |
Latest revision as of 00:07, 2 October 2015
Short description: | p4@Apba1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Apba1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 136bp_to_ENSMUST00000025830, NM_177034, uc008hai.1, uc012bjp.1_5end |
EntrezGene: | Apba1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.96e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.96e-12 | 23 |
raphe nuclei neuron | 2.71e-10 | 3 |
neuron of the substantia nigra | 4.19e-10 | 3 |
neuron | 7.32e-08 | 33 |
neuronal stem cell | 7.32e-08 | 33 |
neuroblast | 7.32e-08 | 33 |
electrically signaling cell | 7.32e-08 | 33 |
neuron of the dorsal spinal cord | 2.45e-07 | 2 |