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FFCP PHASE1:Mm9::chr3:34549096..34549111,+: Difference between revisions

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(Created page with "{{FFCP |id=chr3:34549096..34549111,+ |short_description=p3@Sox2 |description=CAGE_peak_3_at_Sox2_5end |association_with_transcript=38bp_to_ENSMUST00000171472_5end |Entrez...")
 
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{{FFCP
{{FFCP
|id=chr3:34549096..34549111,+
|DHSsupport=NA
|short_description=p3@Sox2
|DPIdataset=NA
|description=CAGE_peak_3_at_Sox2_5end
|association_with_transcript=38bp_to_ENSMUST00000171472_5end
|EntrezGene=20674
|EntrezGene=20674
|HGNC=
|HGNC=
|MCL_coexpression_id=1685
|TSSclassifier=NA
|UniProt=Q60I23
|UniProt=Q60I23
|association_with_transcript=38bp_to_ENSMUST00000171472_5end
|cluster_id=chr3:34549096..34549111,+
|description=CAGE_peak_3_at_Sox2_5end
|id=chr3:34549096..34549111,+
|ontology_enrichment_celltype=CL:0000221!4.26e-26!44;CL:0000133!4.26e-26!44;CL:0002319!2.36e-25!43;CL:0000055!4.31e-19!50;CL:0000540!1.80e-17!33;CL:0000047!1.80e-17!33;CL:0000031!1.80e-17!33;CL:0000404!1.80e-17!33;CL:0000117!2.66e-16!23;CL:0000337!2.66e-16!23;CL:0000393!1.11e-12!39;CL:0000211!1.11e-12!39;CL:0002321!1.69e-11!70;CL:0000220!1.69e-11!70;CL:0000333!8.11e-09!10;CL:0000095!8.11e-09!10;CL:0000243!8.11e-09!10;CL:0000123!8.11e-09!10;CL:0000125!8.11e-09!10;CL:0000030!8.11e-09!10;CL:0000339!8.11e-09!10;CL:0002453!1.39e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000221,1.36e-26,44;CL:0000133,1.36e-26,44;CL:0002319,1.66e-25,43;CL:0000117,9.79e-24,23;CL:0000337,9.79e-24,23;CL:0000540,1.22e-15,33;CL:0000047,1.22e-15,33;CL:0000031,1.22e-15,33;CL:0000404,1.22e-15,33;CL:0002321,1.12e-13,70;CL:0000393,3.79e-12,39;CL:0000211,3.79e-12,39;CL:0000333,1.92e-11,10;CL:0000095,1.92e-11,10;CL:0000243,1.92e-11,10;CL:0000123,1.92e-11,10;CL:0000125,1.92e-11,10;CL:0000030,1.92e-11,10;CL:0000339,1.92e-11,10;CL:0002453,1.92e-09,8;CL:0002609,8.73e-09,6;CL:0000128,9.69e-07,6;CL:0000126,9.69e-07,6;CL:0000127,9.69e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.86e-47!75;UBERON:0001016!1.86e-47!75;UBERON:0001017!9.17e-46!73;UBERON:0005743!9.17e-46!73;UBERON:0004121!1.43e-37!102;UBERON:0000924!1.43e-37!102;UBERON:0006601!1.43e-37!102;UBERON:0001049!3.72e-34!52;UBERON:0005068!3.72e-34!52;UBERON:0006241!3.72e-34!52;UBERON:0007135!3.72e-34!52;UBERON:0000955!4.95e-33!50;UBERON:0006238!4.95e-33!50;UBERON:0000033!1.14e-32!63;UBERON:0002616!2.45e-32!49;UBERON:0002346!1.01e-28!71;UBERON:0003075!1.01e-28!71;UBERON:0007284!1.01e-28!71;UBERON:0003080!1.66e-26!40;UBERON:0002780!8.84e-26!39;UBERON:0001890!8.84e-26!39;UBERON:0006240!8.84e-26!39;UBERON:0003056!2.28e-25!49;UBERON:0002020!3.10e-23!34;UBERON:0002791!4.32e-20!29;UBERON:0003528!4.32e-20!29;UBERON:0001893!4.32e-20!29;UBERON:0007811!1.25e-17!86;UBERON:0000956!3.40e-15!21;UBERON:0001869!3.40e-15!21;UBERON:0000203!3.40e-15!21;UBERON:0000153!4.21e-14!94;UBERON:0002619!2.65e-12!17;UBERON:0004111!2.37e-08!122;UBERON:0000025!3.14e-08!114;UBERON:0003076!6.95e-08!12;UBERON:0003057!6.95e-08!12;UBERON:0002021!1.83e-07!10;UBERON:0000411!1.83e-07!10;UBERON:0001950!1.83e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.71e-59,75;UBERON:0001017,1.77e-56,73;UBERON:0000073,1.68e-53,54;UBERON:0001049,8.48e-51,52;UBERON:0005068,8.48e-51,52;UBERON:0006241,8.48e-51,52;UBERON:0007135,8.48e-51,52;UBERON:0000955,7.96e-47,47;UBERON:0006238,7.96e-47,47;UBERON:0004121,3.08e-46,95;UBERON:0000924,3.08e-46,95;UBERON:0006601,3.08e-46,95;UBERON:0002616,1.01e-45,46;UBERON:0003080,6.75e-42,40;UBERON:0002780,1.02e-40,39;UBERON:0001890,1.02e-40,39;UBERON:0006240,1.02e-40,39;UBERON:0002346,1.99e-38,64;UBERON:0003075,1.99e-38,64;UBERON:0007284,1.99e-38,64;UBERON:0002020,6.14e-35,34;UBERON:0010371,1.35e-33,73;UBERON:0003056,7.11e-32,49;UBERON:0003528,1.71e-31,29;UBERON:0002791,1.71e-31,29;UBERON:0001893,1.71e-31,29;UBERON:0010314,1.29e-24,92;UBERON:0000956,1.45e-23,21;UBERON:0001869,1.45e-23,21;UBERON:0000203,1.45e-23,21;UBERON:0002619,6.87e-19,17;UBERON:0011216,3.51e-17,194;UBERON:0000025,3.80e-15,114;UBERON:0004111,6.55e-15,122;UBERON:0002021,4.32e-11,10;UBERON:0000411,4.32e-11,10;UBERON:0001950,4.32e-11,10;UBERON:0001894,1.13e-09,10;UBERON:0006222,1.13e-09,10;UBERON:0001954,3.23e-09,7;UBERON:0003022,3.23e-09,7;UBERON:0002421,3.23e-09,7;UBERON:0000349,3.23e-09,7;UBERON:0002600,3.23e-09,7;UBERON:0003076,6.85e-09,12;UBERON:0003057,6.85e-09,12;UBERON:0002420,6.97e-09,8;UBERON:0007245,6.97e-09,8;UBERON:0010009,6.97e-09,8;UBERON:0010011,6.97e-09,8;UBERON:0000454,6.97e-09,8;UBERON:0000007,8.21e-08,8;UBERON:0003296,8.21e-08,8;UBERON:0010133,8.21e-08,8
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,16.7879370412944,10.3252505885202,12.4435135407541,5.87942970826523,10.062679505548,0,0,0,0,0,0,3.64169629547276,3.1739458756322,3.80298842103708,0.677689064138264,0.889294796111139,0,0,0,11.6844043102178,25.3584081512226,9.7468235569969,8.6403800532282,9.25429829946081,9.14083150092171,5.52171352379034,8.20688354740192,9.4887016308054,2.75765635983006,3.30347642998166,4.34136949489638,4.30098293117482,2.2420668914133,2.37867873366265,3.64639359389732,3.90856198601933,3.93933827022176,3.20876320331301,3.24091444021034,3.41692033917847,0.559198337475902,2.95332153999418,4.76100828672749,0,0,0,0,0,0,0,0,0,0,3.80277233397037,0,0,0,0.216491041011214,1.26679932737549,0.505524445014783,0,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,1.17112318804619,1.25668024088073,0,0,0,0,3.74476598512057,2.28750301409313,4.14659361972453,1.56441888173049,4.34716277461562,2.0778804455956,4.86723789203273,0,0,0,0.210441855886474,0.650602214813519,0,0.540186389416048,0,0.544291993210623,0.384341160854549,0.374806898238915,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,3.15434922846191,2.57261530948211,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0.289298117163023,0,0,0,0,3.05046120976805,3.7507739709505,0,0,0,0.780877488593277,0.861693590931196,0.477937595905104,0.891194696329576,1.13230612315533,0.809621403349789,0.292255857911312,0.790575555893047,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,2.34079422240703,5.95049945400671,1.92903331528433,2.48276327099183,1.42695054081656,1.48094118541909,3.34911444026059,0,0,0,0,0,0,0,0.164140899745061,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0.954670618015114,1.42351197111511,1.82987520414164,0.216010681643603,0.627264888043406,0.436725127492355,1.21377911746339,0.743881101528023,1.04702376793612,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,1.13365191807606,0.887943813496259,1.61484941897056,0.839423081820392,0,0,0,0.214368379079066,0,2.82375921308533,2.76195141904306,2.86447756719698,1.3748254587495,5.48066015816514,6.0431511791176,5.40018000185445,4.05289082901798,3.62513927187364,3.10656187051092,2.07574695168353,2.79317411380722,0.512200817262403,0.729320151204882,1.04806581313991,0.551530525350042,0.666740183404846,0,0.64183841918363,0.252697211763798,1.52087579934144,0.188626341386076,0.37456602987953,0.448176066834085,0.229741875822453,0.476293691283074,0.347652977834566,0.38581844092741,0,0.588795680537589,0,0.532427418478012,0.715308569841963,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0,0,0.561142271657738,0.474540072496697,0.197008964751127,0.818462086339379,0,0.192906610981141,0.499621155875892,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,16.7879370412944,10.3252505885202,12.4435135407541,5.87942970826523,10.062679505548,0,0,0,0,0,0,3.64169629547276,3.1739458756322,3.80298842103708,0.677689064138264,0.889294796111139,0,0,0,11.6844043102178,25.3584081512226,9.7468235569969,8.6403800532282,9.25429829946081,9.14083150092171,5.52171352379034,8.20688354740192,9.4887016308054,2.75765635983006,3.30347642998166,4.34136949489638,4.30098293117482,2.2420668914133,2.37867873366265,3.64639359389732,3.90856198601933,3.93933827022176,3.20876320331301,3.24091444021034,3.41692033917847,0.559198337475902,2.95332153999418,4.76100828672749,0,0,0,0,0,0,0,0,0,0,3.80277233397037,0,0,0,0.216491041011214,1.26679932737549,0.505524445014783,0,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,1.17112318804619,1.25668024088073,0,0,0,0,3.74476598512057,2.28750301409313,4.14659361972453,1.56441888173049,4.34716277461562,2.0778804455956,4.86723789203273,0,0,0,0.210441855886474,0.650602214813519,0,0.540186389416048,0,0.544291993210623,0.384341160854549,0.374806898238915,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,3.15434922846191,2.57261530948211,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0.289298117163023,0,0,0,0,3.05046120976805,3.7507739709505,0,0,0,0.780877488593277,0.861693590931196,0.477937595905104,0.891194696329576,1.13230612315533,0.809621403349789,0.292255857911312,0.790575555893047,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,2.34079422240703,5.95049945400671,1.92903331528433,2.48276327099183,1.42695054081656,1.48094118541909,3.34911444026059,0,0,0,0,0,0,0,0.164140899745061,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0.954670618015114,1.42351197111511,1.82987520414164,0.216010681643603,0.627264888043406,0.436725127492355,1.21377911746339,0.743881101528023,1.04702376793612,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,1.13365191807606,0.887943813496259,1.61484941897056,0.839423081820392,0,0,0,0.214368379079066,0,2.82375921308533,2.76195141904306,2.86447756719698,1.3748254587495,5.48066015816514,6.0431511791176,5.40018000185445,4.05289082901798,3.62513927187364,3.10656187051092,2.07574695168353,2.79317411380722,0.512200817262403,0.729320151204882,1.04806581313991,0.551530525350042,0.666740183404846,0,0.64183841918363,0.252697211763798,1.52087579934144,0.188626341386076,0.37456602987953,0.448176066834085,0.229741875822453,0.476293691283074,0.347652977834566,0.38581844092741,0,0.588795680537589,0,0.532427418478012,0.715308569841963,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0,0,0.561142271657738,0.474540072496697,0.197008964751127,0.818462086339379,0,0.192906610981141,0.499621155875892,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p3@Sox2
}}
}}

Latest revision as of 23:14, 1 October 2015

Short description:p3@Sox2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sox2_5end
Coexpression cluster:MCL_coexpression_mm9:1685
Association with transcript: 38bp_to_ENSMUST00000171472_5end
EntrezGene:Sox2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sox2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C216.79
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C811.68
Mouse Microglia, donor2.CNhs12634.11736-123E825.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.21
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D92.95
Mouse Schwann, donor2.CNhs12573.11746-123F94.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F14.15
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B24.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C75.95
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system4.71e-5975
central nervous system1.77e-5673
regional part of nervous system1.68e-5354
neural tube8.48e-5152
neural rod8.48e-5152
future spinal cord8.48e-5152
neural keel8.48e-5152
brain7.96e-4747
future brain7.96e-4747
ectoderm-derived structure3.08e-4695
ectoderm3.08e-4695
presumptive ectoderm3.08e-4695
regional part of brain1.01e-4546
anterior neural tube6.75e-4240
regional part of forebrain1.02e-4039
forebrain1.02e-4039
future forebrain1.02e-4039
neurectoderm1.99e-3864
neural plate1.99e-3864
presumptive neural plate1.99e-3864
gray matter6.14e-3534
ecto-epithelium1.35e-3373
pre-chordal neural plate7.11e-3249
brain grey matter1.71e-3129
regional part of telencephalon1.71e-3129
telencephalon1.71e-3129
structure with developmental contribution from neural crest1.29e-2492
cerebral cortex1.45e-2321
cerebral hemisphere1.45e-2321
pallium1.45e-2321
regional part of cerebral cortex6.87e-1917
organ system subdivision3.51e-17194
tube3.80e-15114
anatomical conduit6.55e-15122
occipital lobe4.32e-1110
visual cortex4.32e-1110
neocortex4.32e-1110
diencephalon1.13e-0910
future diencephalon1.13e-0910
Ammon's horn3.23e-097
lobe parts of cerebral cortex3.23e-097
hippocampal formation3.23e-097
limbic system3.23e-097
limbic lobe3.23e-097
posterior neural tube6.85e-0912
chordal neural plate6.85e-0912
basal ganglion6.97e-098
nuclear complex of neuraxis6.97e-098
aggregate regional part of brain6.97e-098
collection of basal ganglia6.97e-098
cerebral subcortex6.97e-098
pituitary gland8.21e-088
gland of diencephalon8.21e-088
neuroendocrine gland8.21e-088
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