FFCP PHASE1:Mm9::chr13:78338032..78338049,-: Difference between revisions
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{{FFCP|EntrezGene=13865|HGNC=|MCL_coexpression_id=13|UniProt=Q32NY6,Q60632,Q3UST6|association_with_transcript=193bp_to_NM_010151,uc007rhe.1_5end|description=CAGE_peak_8_at_Nr2f1_5end|id=chr13:78338032..78338049,-|ontology_enrichment_celltype=CL:0000221!1.65e-18!44;CL:0000133!1.65e-18!44;CL:0002319!8.32e-18!43;CL:0000055!8.35e-16!50;CL:0000540!5.74e-13!33;CL:0000047!5.74e-13!33;CL:0000031!5.74e-13!33;CL:0000404!5.74e-13!33;CL:0000117!3.06e-12!23;CL:0000337!3.06e-12!23;CL:0000393!8.81e-12!39;CL:0000211!8.81e-12!39;CL:0002321!2.30e-07!70;CL:0000220!2.30e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,2.25e-22,23;CL:0000337,2.25e-22,23;CL:0000221,6.07e-20,44;CL:0000133,6.07e-20,44;CL:0002319,1.02e-18,43;CL:0000540,5.58e-14,33;CL:0000047,5.58e-14,33;CL:0000031,5.58e-14,33;CL:0000404,5.58e-14,33;CL:0000393,4.83e-11,39;CL:0000211,4.83e-11,39;CL:0002321,6.71e-10,70;CL:0002609,7.73e-08,6;CL:0002453,2.16e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.53e-34!75;UBERON:0001016!3.53e-34!75;UBERON:0001017!1.36e-33!73;UBERON:0005743!1.36e-33!73;UBERON:0004121!4.03e-33!102;UBERON:0000924!4.03e-33!102;UBERON:0006601!4.03e-33!102;UBERON:0002346!8.64e-32!71;UBERON:0003075!8.64e-32!71;UBERON:0007284!8.64e-32!71;UBERON:0000033!3.08e-30!63;UBERON:0001049!1.84e-27!52;UBERON:0005068!1.84e-27!52;UBERON:0006241!1.84e-27!52;UBERON:0007135!1.84e-27!52;UBERON:0000955!2.22e-26!50;UBERON:0006238!2.22e-26!50;UBERON:0002616!2.76e-26!49;UBERON:0003056!1.43e-24!49;UBERON:0002020!8.84e-22!34;UBERON:0003080!2.33e-20!40;UBERON:0002780!3.93e-20!39;UBERON:0001890!3.93e-20!39;UBERON:0006240!3.93e-20!39;UBERON:0002791!3.23e-19!29;UBERON:0003528!3.23e-19!29;UBERON:0001893!3.23e-19!29;UBERON:0007811!1.93e-16!86;UBERON:0000956!5.60e-14!21;UBERON:0001869!5.60e-14!21;UBERON:0000203!5.60e-14!21;UBERON:0000153!1.97e-13!94;UBERON:0002619!6.26e-11!17;UBERON:0000025!6.79e-08!114;UBERON:0002021!1.22e-07!10;UBERON:0000411!1.22e-07!10;UBERON:0001950!1.22e-07!10;UBERON:0003076!1.43e-07!12;UBERON:0003057!1.43e-07!12;UBERON:0004111!1.47e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.48e-42,54;UBERON:0001017,8.16e-40,73;UBERON:0002020,1.54e-39,34;UBERON:0002346,2.13e-39,64;UBERON:0003075,2.13e-39,64;UBERON:0007284,2.13e-39,64;UBERON:0001049,2.77e-39,52;UBERON:0005068,2.77e-39,52;UBERON:0006241,2.77e-39,52;UBERON:0007135,2.77e-39,52;UBERON:0001016,1.93e-38,75;UBERON:0004121,1.48e-37,95;UBERON:0000924,1.48e-37,95;UBERON:0006601,1.48e-37,95;UBERON:0003528,4.08e-36,29;UBERON:0002791,4.08e-36,29;UBERON:0001893,4.08e-36,29;UBERON:0010371,3.64e-35,73;UBERON:0002616,2.99e-34,46;UBERON:0000955,2.55e-33,47;UBERON:0006238,2.55e-33,47;UBERON:0003056,1.03e-32,49;UBERON:0002780,1.88e-31,39;UBERON:0001890,1.88e-31,39;UBERON:0006240,1.88e-31,39;UBERON:0003080,1.87e-30,40;UBERON:0000956,6.23e-27,21;UBERON:0001869,6.23e-27,21;UBERON:0000203,6.23e-27,21;UBERON:0010314,1.47e-25,92;UBERON:0002619,2.18e-20,17;UBERON:0002021,2.10e-12,10;UBERON:0000411,2.10e-12,10;UBERON:0001950,2.10e-12,10;UBERON:0000025,2.28e-12,114;UBERON:0004111,7.62e-12,122;UBERON:0002420,4.95e-10,8;UBERON:0007245,4.95e-10,8;UBERON:0010009,4.95e-10,8;UBERON:0010011,4.95e-10,8;UBERON:0000454,4.95e-10,8;UBERON:0001954,2.28e-09,7;UBERON:0003022,2.28e-09,7;UBERON:0002421,2.28e-09,7;UBERON:0000349,2.28e-09,7;UBERON:0002600,2.28e-09,7;UBERON:0011216,4.31e-09,194;UBERON:0000369,6.29e-09,5;UBERON:0002435,6.29e-09,5;UBERON:0000204,6.29e-09,5;UBERON:0010082,6.29e-09,5;UBERON:0003076,7.55e-09,12;UBERON:0003057,7.55e-09,12;UBERON:0000119,9.43e-09,176;UBERON:0000483,2.85e-08,174|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,3.12956537739216,0.872100625521786,4.61340983742391,2.52758868796568,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,1.21389876515759,0,3.1691570175309,0,1.77858959222228,0,0,0,1.49800055259202,1.92109152660777,3.11068836925433,3.78016627328734,2.94454945891935,0.571301968807607,1.32521124570968,3.55223317723367,1.72521847832825,0,1.10115880999389,3.19218345212969,2.4577045320999,2.50583946687368,2.47016637726506,2.6045668527838,1.67509799400829,0.56276261003168,2.44477196442896,1.17851434189467,1.42371680799103,1.4911955666024,0.302904773332736,0.604572480854284,0,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0.35333957451034,2.11265129665021,0,0,0,0,0,0,0,0,0.593768556259299,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,3.22058876712702,1.67557365450764,0,0,0,0,0.449371918214468,1.83000241127451,1.88481528169297,2.43354048269187,1.53429274398198,1.45451631191692,1.78465389374533,0.509196819251581,0.124406970610093,0,0.210441855886474,1.30120442962704,1.14951052216736,1.44049703844279,1.50704817835715,1.36072998302656,0.896796041993948,0.937017245597288,0.517406741478031,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0,0,0,2.10289948564127,4.6307075570678,0,0,0.639864751605702,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.114248512609729,0,0.610953983535943,0.193952487167626,0.771494018793504,0.316182685621286,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0.568474235311454,0,0,0,0,0,0,0,0,0.637819074629948,0.163863314715738,0.345369963731791,0.144649058581512,0,0.54390568381871,0,0,0.642202359951168,1.17211686592203,0.491804836130026,0,0.315508219416257,0.780877488593277,0.430846795465598,0.477937595905104,0.668396022247182,0.566153061577665,0.809621403349789,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,1.62054984628179,0.388076051348264,0.428674070063185,0.709360934569094,0.713475270408282,0.329098041204242,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0.954670618015114,1.10717597753397,0.203319467126849,0,0,0.436725127492355,0.134864346384821,0.41326727862668,0,0,0,0.56369293868419,0.299033092087958,0,0.388902376688095,0,0,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0,0,0,1.12950368523413,3.22227665555024,1.14579102687879,3.78077001156113,0.685082519770642,2.2661816921691,2.70009000092722,1.80128481289688,1.81256963593682,2.07104124700728,1.14166082342594,1.59609949360412,0.341467211508268,0,0,0,0.666740183404846,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0.377252682772152,0.561849044819294,0.320125762024346,0.516919220600519,0,0.347652977834566,0.578727661391115,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.467863216890817,0.429742108096597,0,0.220591419119515,0|short_description=p8@Nr2f1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13865 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q32NY6,Q60632,Q3UST6 | |||
|association_with_transcript=193bp_to_NM_010151,uc007rhe.1_5end | |||
|cluster_id=chr13:78338032..78338049,- | |||
|description=CAGE_peak_8_at_Nr2f1_5end | |||
|id=chr13:78338032..78338049,- | |||
|ontology_enrichment_celltype=CL:0000221!1.65e-18!44;CL:0000133!1.65e-18!44;CL:0002319!8.32e-18!43;CL:0000055!8.35e-16!50;CL:0000540!5.74e-13!33;CL:0000047!5.74e-13!33;CL:0000031!5.74e-13!33;CL:0000404!5.74e-13!33;CL:0000117!3.06e-12!23;CL:0000337!3.06e-12!23;CL:0000393!8.81e-12!39;CL:0000211!8.81e-12!39;CL:0002321!2.30e-07!70;CL:0000220!2.30e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.25e-22,23;CL:0000337,2.25e-22,23;CL:0000221,6.07e-20,44;CL:0000133,6.07e-20,44;CL:0002319,1.02e-18,43;CL:0000540,5.58e-14,33;CL:0000047,5.58e-14,33;CL:0000031,5.58e-14,33;CL:0000404,5.58e-14,33;CL:0000393,4.83e-11,39;CL:0000211,4.83e-11,39;CL:0002321,6.71e-10,70;CL:0002609,7.73e-08,6;CL:0002453,2.16e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.53e-34!75;UBERON:0001016!3.53e-34!75;UBERON:0001017!1.36e-33!73;UBERON:0005743!1.36e-33!73;UBERON:0004121!4.03e-33!102;UBERON:0000924!4.03e-33!102;UBERON:0006601!4.03e-33!102;UBERON:0002346!8.64e-32!71;UBERON:0003075!8.64e-32!71;UBERON:0007284!8.64e-32!71;UBERON:0000033!3.08e-30!63;UBERON:0001049!1.84e-27!52;UBERON:0005068!1.84e-27!52;UBERON:0006241!1.84e-27!52;UBERON:0007135!1.84e-27!52;UBERON:0000955!2.22e-26!50;UBERON:0006238!2.22e-26!50;UBERON:0002616!2.76e-26!49;UBERON:0003056!1.43e-24!49;UBERON:0002020!8.84e-22!34;UBERON:0003080!2.33e-20!40;UBERON:0002780!3.93e-20!39;UBERON:0001890!3.93e-20!39;UBERON:0006240!3.93e-20!39;UBERON:0002791!3.23e-19!29;UBERON:0003528!3.23e-19!29;UBERON:0001893!3.23e-19!29;UBERON:0007811!1.93e-16!86;UBERON:0000956!5.60e-14!21;UBERON:0001869!5.60e-14!21;UBERON:0000203!5.60e-14!21;UBERON:0000153!1.97e-13!94;UBERON:0002619!6.26e-11!17;UBERON:0000025!6.79e-08!114;UBERON:0002021!1.22e-07!10;UBERON:0000411!1.22e-07!10;UBERON:0001950!1.22e-07!10;UBERON:0003076!1.43e-07!12;UBERON:0003057!1.43e-07!12;UBERON:0004111!1.47e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.48e-42,54;UBERON:0001017,8.16e-40,73;UBERON:0002020,1.54e-39,34;UBERON:0002346,2.13e-39,64;UBERON:0003075,2.13e-39,64;UBERON:0007284,2.13e-39,64;UBERON:0001049,2.77e-39,52;UBERON:0005068,2.77e-39,52;UBERON:0006241,2.77e-39,52;UBERON:0007135,2.77e-39,52;UBERON:0001016,1.93e-38,75;UBERON:0004121,1.48e-37,95;UBERON:0000924,1.48e-37,95;UBERON:0006601,1.48e-37,95;UBERON:0003528,4.08e-36,29;UBERON:0002791,4.08e-36,29;UBERON:0001893,4.08e-36,29;UBERON:0010371,3.64e-35,73;UBERON:0002616,2.99e-34,46;UBERON:0000955,2.55e-33,47;UBERON:0006238,2.55e-33,47;UBERON:0003056,1.03e-32,49;UBERON:0002780,1.88e-31,39;UBERON:0001890,1.88e-31,39;UBERON:0006240,1.88e-31,39;UBERON:0003080,1.87e-30,40;UBERON:0000956,6.23e-27,21;UBERON:0001869,6.23e-27,21;UBERON:0000203,6.23e-27,21;UBERON:0010314,1.47e-25,92;UBERON:0002619,2.18e-20,17;UBERON:0002021,2.10e-12,10;UBERON:0000411,2.10e-12,10;UBERON:0001950,2.10e-12,10;UBERON:0000025,2.28e-12,114;UBERON:0004111,7.62e-12,122;UBERON:0002420,4.95e-10,8;UBERON:0007245,4.95e-10,8;UBERON:0010009,4.95e-10,8;UBERON:0010011,4.95e-10,8;UBERON:0000454,4.95e-10,8;UBERON:0001954,2.28e-09,7;UBERON:0003022,2.28e-09,7;UBERON:0002421,2.28e-09,7;UBERON:0000349,2.28e-09,7;UBERON:0002600,2.28e-09,7;UBERON:0011216,4.31e-09,194;UBERON:0000369,6.29e-09,5;UBERON:0002435,6.29e-09,5;UBERON:0000204,6.29e-09,5;UBERON:0010082,6.29e-09,5;UBERON:0003076,7.55e-09,12;UBERON:0003057,7.55e-09,12;UBERON:0000119,9.43e-09,176;UBERON:0000483,2.85e-08,174 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,3.12956537739216,0.872100625521786,4.61340983742391,2.52758868796568,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,1.21389876515759,0,3.1691570175309,0,1.77858959222228,0,0,0,1.49800055259202,1.92109152660777,3.11068836925433,3.78016627328734,2.94454945891935,0.571301968807607,1.32521124570968,3.55223317723367,1.72521847832825,0,1.10115880999389,3.19218345212969,2.4577045320999,2.50583946687368,2.47016637726506,2.6045668527838,1.67509799400829,0.56276261003168,2.44477196442896,1.17851434189467,1.42371680799103,1.4911955666024,0.302904773332736,0.604572480854284,0,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0.35333957451034,2.11265129665021,0,0,0,0,0,0,0,0,0.593768556259299,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,3.22058876712702,1.67557365450764,0,0,0,0,0.449371918214468,1.83000241127451,1.88481528169297,2.43354048269187,1.53429274398198,1.45451631191692,1.78465389374533,0.509196819251581,0.124406970610093,0,0.210441855886474,1.30120442962704,1.14951052216736,1.44049703844279,1.50704817835715,1.36072998302656,0.896796041993948,0.937017245597288,0.517406741478031,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0,0,0,2.10289948564127,4.6307075570678,0,0,0.639864751605702,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.114248512609729,0,0.610953983535943,0.193952487167626,0.771494018793504,0.316182685621286,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0.568474235311454,0,0,0,0,0,0,0,0,0.637819074629948,0.163863314715738,0.345369963731791,0.144649058581512,0,0.54390568381871,0,0,0.642202359951168,1.17211686592203,0.491804836130026,0,0.315508219416257,0.780877488593277,0.430846795465598,0.477937595905104,0.668396022247182,0.566153061577665,0.809621403349789,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,1.62054984628179,0.388076051348264,0.428674070063185,0.709360934569094,0.713475270408282,0.329098041204242,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0.954670618015114,1.10717597753397,0.203319467126849,0,0,0.436725127492355,0.134864346384821,0.41326727862668,0,0,0,0.56369293868419,0.299033092087958,0,0.388902376688095,0,0,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0,0,0,1.12950368523413,3.22227665555024,1.14579102687879,3.78077001156113,0.685082519770642,2.2661816921691,2.70009000092722,1.80128481289688,1.81256963593682,2.07104124700728,1.14166082342594,1.59609949360412,0.341467211508268,0,0,0,0.666740183404846,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0.377252682772152,0.561849044819294,0.320125762024346,0.516919220600519,0,0.347652977834566,0.578727661391115,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.467863216890817,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p8@Nr2f1 | |||
}} |
Latest revision as of 23:04, 1 October 2015
Short description: | p8@Nr2f1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Nr2f1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 193bp_to_NM_010151, uc007rhe.1_5end |
EntrezGene: | Nr2f1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.25e-22 | 23 |
neuroblast (sensu Vertebrata) | 2.25e-22 | 23 |
ectodermal cell | 6.07e-20 | 44 |
neurectodermal cell | 6.07e-20 | 44 |
neural cell | 1.02e-18 | 43 |
neuron | 5.58e-14 | 33 |
neuronal stem cell | 5.58e-14 | 33 |
neuroblast | 5.58e-14 | 33 |
electrically signaling cell | 5.58e-14 | 33 |
electrically responsive cell | 4.83e-11 | 39 |
electrically active cell | 4.83e-11 | 39 |
embryonic cell | 6.71e-10 | 70 |
neuron of cerebral cortex | 7.73e-08 | 6 |
oligodendrocyte precursor cell | 2.16e-07 | 8 |