FFCP PHASE1:Mm9::chr8:3625274..3625288,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18545 | |EntrezGene=18545 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |MCL_coexpression_id=30 | ||
|TSSclassifier=NA | |||
|UniProt=P12660,A8IK50 | |UniProt=P12660,A8IK50 | ||
|association_with_transcript=0bp_to_ENSMUST00000004749,NM_008790,uc009ksb.1_5end | |association_with_transcript=0bp_to_ENSMUST00000004749,NM_008790,uc009ksb.1_5end | ||
|cluster_id=chr8:3625274..3625288,- | |||
|description=CAGE_peak_1_at_Pcp2_5end | |description=CAGE_peak_1_at_Pcp2_5end | ||
|id=chr8:3625274..3625288,- | |id=chr8:3625274..3625288,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!1.11e-09!6;UBERON:0004733!4.19e-07!6;UBERON:0004732!4.19e-07!6;UBERON:0002028!4.19e-07!6;UBERON:0007277!4.19e-07!6 | |ontology_enrichment_uberon=UBERON:0002298!1.11e-09!6;UBERON:0004733!4.19e-07!6;UBERON:0004732!4.19e-07!6;UBERON:0002028!4.19e-07!6;UBERON:0007277!4.19e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,8.37e-24,6;UBERON:0004732,8.37e-24,6;UBERON:0002028,8.37e-24,6;UBERON:0007277,8.37e-24,6;UBERON:0001896,6.48e-18,2;UBERON:0002298,6.48e-18,2;UBERON:0005290,6.48e-18,2;UBERON:0010096,6.48e-18,2;UBERON:0003076,4.10e-12,12;UBERON:0003057,4.10e-12,12;UBERON:0002037,4.16e-10,4;UBERON:0002680,4.16e-10,4;UBERON:0001895,4.16e-10,4;UBERON:0010092,4.16e-10,4;UBERON:0006215,4.16e-10,4;UBERON:0002616,4.37e-09,46;UBERON:0000955,6.93e-09,47;UBERON:0006238,6.93e-09,47;UBERON:0001049,5.35e-08,52;UBERON:0005068,5.35e-08,52;UBERON:0006241,5.35e-08,52;UBERON:0007135,5.35e-08,52;UBERON:0000073,1.09e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8561255688249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.4105218661851,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,6.46044332606059,0,0,0,0,0,0,0,0,0,0,4.90990682791958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,740.149854845191,868.366046448585,0,0,0,0,0.149790639404823,4.57500602818627,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,2.93029216480508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2516060161211,0.453142408984205,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.685738504770831,0.354951612318675,0,0,0.470546902076653,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0,0.749431733813838,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8561255688249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.4105218661851,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,6.46044332606059,0,0,0,0,0,0,0,0,0,0,4.90990682791958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,740.149854845191,868.366046448585,0,0,0,0,0.149790639404823,4.57500602818627,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,2.93029216480508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2516060161211,0.453142408984205,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.685738504770831,0.354951612318675,0,0,0.470546902076653,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0,0.749431733813838,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p1@Pcp2 | |short_description=p1@Pcp2 | ||
}} | }} |
Latest revision as of 22:53, 1 October 2015
Short description: | p1@Pcp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_ENSMUST00000004749, NM_008790, uc009ksb.1_5end |
EntrezGene: | Pcp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 8.37e-24 | 6 |
segmental subdivision of nervous system | 8.37e-24 | 6 |
hindbrain | 8.37e-24 | 6 |
presumptive hindbrain | 8.37e-24 | 6 |
medulla oblongata | 6.48e-18 | 2 |
brainstem | 6.48e-18 | 2 |
myelencephalon | 6.48e-18 | 2 |
future myelencephalon | 6.48e-18 | 2 |
posterior neural tube | 4.10e-12 | 12 |
chordal neural plate | 4.10e-12 | 12 |
cerebellum | 4.16e-10 | 4 |
regional part of metencephalon | 4.16e-10 | 4 |
metencephalon | 4.16e-10 | 4 |
future metencephalon | 4.16e-10 | 4 |
rhombic lip | 4.16e-10 | 4 |
regional part of brain | 4.37e-09 | 46 |
brain | 6.93e-09 | 47 |
future brain | 6.93e-09 | 47 |
neural tube | 5.35e-08 | 52 |
neural rod | 5.35e-08 | 52 |
future spinal cord | 5.35e-08 | 52 |
neural keel | 5.35e-08 | 52 |
regional part of nervous system | 1.09e-07 | 54 |