FFCP PHASE1:Mm9::chr19:11679298..11679307,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=68774 | |EntrezGene=68774 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=Q2TVW7,Q99N07 | |UniProt=Q2TVW7,Q99N07 | ||
|association_with_transcript=-4bp_to_NM_026835,uc008gsm.1_5end | |||
|cluster_id=chr19:11679298..11679307,- | |||
|description=CAGE_peak_5_at_Ms4a6d_5end | |||
|id=chr19:11679298..11679307,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,6.49e-25,3;CL:0002540,6.49e-25,3;CL:0002476,1.07e-17,2;CL:0000355,2.51e-14,9;CL:0002494,3.20e-11,3;CL:0000737,3.20e-11,3;CL:0000746,3.20e-11,3;CL:0000513,3.20e-11,3;CL:0002194,2.53e-09,4;CL:0000766,2.53e-09,4;CL:0000234,2.53e-09,4;CL:0000576,2.53e-09,4;CL:0000235,2.53e-09,4;CL:0000864,2.53e-09,4;CL:0002009,2.53e-09,4;CL:0000040,2.53e-09,4;CL:0000559,2.53e-09,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.07e-11,3;DOID:4045,1.07e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!6.60e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.58e-20,32;UBERON:0001134,2.51e-14,9;UBERON:0002036,2.51e-14,9;UBERON:0002385,2.51e-14,9;UBERON:0000486,2.51e-14,9;UBERON:0007503,2.51e-14,9;UBERON:0001015,2.51e-14,9;UBERON:0002329,2.51e-14,9;UBERON:0003082,2.51e-14,9;UBERON:0003059,2.51e-14,9;UBERON:0007282,2.51e-14,9;UBERON:0004290,2.51e-14,9;UBERON:0009618,2.51e-14,9;UBERON:0000383,6.26e-13,10;UBERON:0002371,6.57e-13,16;UBERON:0007524,8.72e-12,11;UBERON:0003077,8.72e-12,11;UBERON:0007285,8.72e-12,11;UBERON:0001474,2.13e-09,22;UBERON:0004765,2.13e-09,22;UBERON:0001434,2.13e-09,22 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.774739940649458,0,0.468129052643987,0,0.0797721589953364,0,0.699363219351979,0,0.404950534779652,0.699561878128147,0,0,0,0.255129870453209,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,3.906676722619,2.61761871986899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,1.43266719969378,1.03134418455488,0,0,0,0,0,3.5995988691256,3.9554654502679,3.5524005747305,0.898800331555214,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.593768556259299,0,0,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0,0,0.203678727700633,0.746441823660558,0,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.340182495756639,0,0,0,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.823128545631774,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.878200461164203,0,0.420579897128254,0,0,0.264450566663544,0,0.464473343720877,0.38660238396628,0,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.648540907100142,0.549122826376163,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.44292937929755,0,0.163863314715738,0.172684981865896,0.723245292907558,10.5553898757491,31.5465296614852,0,1.10374698521893,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0,0.164549020602121,0,0.704015124191131,0,0,0,0.322928853391811,0.120625849856312,0.238744688006273,0.164140899745061,0,0.18542530201051,0.170870880797853,0.412773735926445,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0.314578033277133,0,0,0,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.360586348559907,0.295379054349154,0,0.0762068066549998,0,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0.375364950902364,0.36630324853453,0,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0,0.252697211763798,0,0,0,0.320125762024346,0,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.145346416632329,0,0.338458431566706,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.492522411877817,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.774739940649458,0,0.468129052643987,0,0.0797721589953364,0,0.699363219351979,0,0.404950534779652,0.699561878128147,0,0,0,0.255129870453209,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,3.906676722619,2.61761871986899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,1.43266719969378,1.03134418455488,0,0,0,0,0,3.5995988691256,3.9554654502679,3.5524005747305,0.898800331555214,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.593768556259299,0,0,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0,0,0.203678727700633,0.746441823660558,0,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.340182495756639,0,0,0,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.823128545631774,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.878200461164203,0,0.420579897128254,0,0,0.264450566663544,0,0.464473343720877,0.38660238396628,0,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.648540907100142,0.549122826376163,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.44292937929755,0,0.163863314715738,0.172684981865896,0.723245292907558,10.5553898757491,31.5465296614852,0,1.10374698521893,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0,0.164549020602121,0,0.704015124191131,0,0,0,0.322928853391811,0.120625849856312,0.238744688006273,0.164140899745061,0,0.18542530201051,0.170870880797853,0.412773735926445,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0.314578033277133,0,0,0,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.360586348559907,0.295379054349154,0,0.0762068066549998,0,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0.375364950902364,0.36630324853453,0,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0,0.252697211763798,0,0,0,0.320125762024346,0,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.145346416632329,0,0.338458431566706,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.492522411877817,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p5@Ms4a6d | |||
}} | }} |
Latest revision as of 22:05, 1 October 2015
Short description: | p5@Ms4a6d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ms4a6d_5end |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | -4bp_to_NM_026835, uc008gsm.1_5end |
EntrezGene: | Ms4a6d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 6.49e-25 | 3 |
mesenchymal stem cell of the bone marrow | 6.49e-25 | 3 |
bone marrow macrophage | 1.07e-17 | 2 |
multi-potent skeletal muscle stem cell | 2.51e-14 | 9 |
cardiocyte | 3.20e-11 | 3 |
striated muscle cell | 3.20e-11 | 3 |
cardiac muscle cell | 3.20e-11 | 3 |
cardiac muscle myoblast | 3.20e-11 | 3 |
monopoietic cell | 2.53e-09 | 4 |
myeloid leukocyte | 2.53e-09 | 4 |
phagocyte | 2.53e-09 | 4 |
monocyte | 2.53e-09 | 4 |
macrophage | 2.53e-09 | 4 |
tissue-resident macrophage | 2.53e-09 | 4 |
macrophage dendritic cell progenitor | 2.53e-09 | 4 |
monoblast | 2.53e-09 | 4 |
promonocyte | 2.53e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 8.58e-20 | 32 |
skeletal muscle tissue | 2.51e-14 | 9 |
striated muscle tissue | 2.51e-14 | 9 |
muscle tissue | 2.51e-14 | 9 |
multilaminar epithelium | 2.51e-14 | 9 |
epithelial vesicle | 2.51e-14 | 9 |
musculature | 2.51e-14 | 9 |
somite | 2.51e-14 | 9 |
myotome | 2.51e-14 | 9 |
presomitic mesoderm | 2.51e-14 | 9 |
presumptive segmental plate | 2.51e-14 | 9 |
dermomyotome | 2.51e-14 | 9 |
trunk paraxial mesoderm | 2.51e-14 | 9 |
musculature of body | 6.26e-13 | 10 |
bone marrow | 6.57e-13 | 16 |
dense mesenchyme tissue | 8.72e-12 | 11 |
paraxial mesoderm | 8.72e-12 | 11 |
presumptive paraxial mesoderm | 8.72e-12 | 11 |
bone element | 2.13e-09 | 22 |
skeletal element | 2.13e-09 | 22 |
skeletal system | 2.13e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.07e-11 | 3 |
muscle cancer | 1.07e-11 | 3 |