FFCP PHASE1:Mm9::chr6:90707455..90707466,-: Difference between revisions
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|id=chr6:90707455..90707466,-
|short_description=p16@Iqsec1
|description=CAGE_peak_16_at_Iqsec1_5end
|association_with_transcript=77bp_to_ENSMUST00000146977_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=232227 | |EntrezGene=232227 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=77bp_to_ENSMUST00000146977_5end | |||
|cluster_id=chr6:90707455..90707466,- | |||
|description=CAGE_peak_16_at_Iqsec1_5end | |||
|id=chr6:90707455..90707466,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.38e-11,6;CL:0000556,2.38e-11,6;CL:0000945,1.24e-08,1;CL:0000236,1.24e-08,1;CL:0000826,1.24e-08,1;CL:0000213,2.06e-08,1;CL:0002078,2.06e-08,1;CL:0000115,2.06e-08,1;CL:0002262,2.06e-08,1;CL:1000398,2.06e-08,1;CL:0000355,4.11e-08,9;CL:0000050,9.33e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.98e-23,3;DOID:4045,3.98e-23,3;DOID:0050686,6.82e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.15e-08!48;UBERON:0002106!2.28e-08!6;UBERON:0004457!2.28e-08!6;UBERON:0000042!2.28e-08!6;UBERON:0004854!2.28e-08!6;UBERON:0009034!2.28e-08!6;UBERON:0002095!2.28e-08!6;UBERON:0004782!2.28e-08!6;UBERON:0003281!2.28e-08!6;UBERON:0009664!2.28e-08!6;UBERON:0002296!2.28e-08!6;UBERON:0005602!2.28e-08!6;UBERON:0001179!2.28e-08!6;UBERON:0006293!2.28e-08!6;UBERON:0003081!1.93e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.06e-08,1;UBERON:0001281,2.06e-08,1;UBERON:0000353,2.06e-08,1;UBERON:0003497,2.06e-08,1;UBERON:0003909,2.06e-08,1;UBERON:0003928,2.06e-08,1;UBERON:0003835,2.06e-08,1;UBERON:0003513,2.06e-08,1;UBERON:0001280,2.06e-08,1;UBERON:0004647,2.06e-08,1;UBERON:0002294,2.06e-08,1;UBERON:0001173,2.06e-08,1;UBERON:0004912,2.06e-08,1;UBERON:0005171,2.06e-08,1;UBERON:0000029,2.89e-08,1;UBERON:0001097,2.89e-08,1;UBERON:0003968,2.89e-08,1;UBERON:0001467,2.89e-08,1;UBERON:0001134,4.11e-08,9;UBERON:0002036,4.11e-08,9;UBERON:0002385,4.11e-08,9;UBERON:0000486,4.11e-08,9;UBERON:0007503,4.11e-08,9;UBERON:0001015,4.11e-08,9;UBERON:0002329,4.11e-08,9;UBERON:0003082,4.11e-08,9;UBERON:0003059,4.11e-08,9;UBERON:0007282,4.11e-08,9;UBERON:0004290,4.11e-08,9;UBERON:0009618,4.11e-08,9;UBERON:0002204,4.95e-08,32;UBERON:0000383,2.37e-07,10;UBERON:0007524,9.96e-07,11;UBERON:0003077,9.96e-07,11;UBERON:0007285,9.96e-07,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.563154888606667,0.70219357896598,0,0,0.171200729931206,0.174840804837995,0,0,0,2.20823515750766,2.05671650408608,1.69755860719212,0,0,0,0.319984845586813,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,25.1118978442145,25.0027310247616,10.470474879476,53.5290654108223,56.0097297665925,16.0218416500281,0,0,0,0,0,0,0,0,0,6.71130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0.323533699894818,0,0.969750506270444,0,0,0,0,0.599075622529601,0,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0.180062061461015,0,0,0,0,0,0.350296027101508,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0.358794827043824,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0.370389054739423,0.376736914009382,0.136694227721025,0.457556346413045,0,0.279902904647316,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.563154888606667,0.70219357896598,0,0,0.171200729931206,0.174840804837995,0,0,0,2.20823515750766,2.05671650408608,1.69755860719212,0,0,0,0.319984845586813,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,25.1118978442145,25.0027310247616,10.470474879476,53.5290654108223,56.0097297665925,16.0218416500281,0,0,0,0,0,0,0,0,0,6.71130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0.323533699894818,0,0.969750506270444,0,0,0,0,0.599075622529601,0,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0.180062061461015,0,0,0,0,0,0.350296027101508,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0.358794827043824,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0.370389054739423,0.376736914009382,0.136694227721025,0.457556346413045,0,0.279902904647316,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p16@Iqsec1 | |||
}} | }} |
Latest revision as of 22:02, 1 October 2015
Short description: | p16@Iqsec1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Iqsec1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 77bp_to_ENSMUST00000146977_5end |
EntrezGene: | Iqsec1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.38e-11 | 6 |
megakaryocyte | 2.38e-11 | 6 |
lymphocyte of B lineage | 1.24e-08 | 1 |
B cell | 1.24e-08 | 1 |
pro-B cell | 1.24e-08 | 1 |
lining cell | 2.06e-08 | 1 |
meso-epithelial cell | 2.06e-08 | 1 |
endothelial cell | 2.06e-08 | 1 |
endothelial cell of sinusoid | 2.06e-08 | 1 |
endothelial cell of hepatic sinusoid | 2.06e-08 | 1 |
multi-potent skeletal muscle stem cell | 4.11e-08 | 9 |
megakaryocyte-erythroid progenitor cell | 9.33e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.06e-08 | 1 |
hepatic sinusoid | 2.06e-08 | 1 |
parenchyma | 2.06e-08 | 1 |
abdomen blood vessel | 2.06e-08 | 1 |
sinusoid | 2.06e-08 | 1 |
digestive system duct | 2.06e-08 | 1 |
abdominal segment blood vessel | 2.06e-08 | 1 |
trunk blood vessel | 2.06e-08 | 1 |
liver parenchyma | 2.06e-08 | 1 |
liver lobule | 2.06e-08 | 1 |
biliary system | 2.06e-08 | 1 |
biliary tree | 2.06e-08 | 1 |
biliary bud | 2.06e-08 | 1 |
hepatic duct | 2.06e-08 | 1 |
lymph node | 2.89e-08 | 1 |
axillary lymph node | 2.89e-08 | 1 |
peripheral lymph node | 2.89e-08 | 1 |
shoulder | 2.89e-08 | 1 |
skeletal muscle tissue | 4.11e-08 | 9 |
striated muscle tissue | 4.11e-08 | 9 |
muscle tissue | 4.11e-08 | 9 |
multilaminar epithelium | 4.11e-08 | 9 |
epithelial vesicle | 4.11e-08 | 9 |
musculature | 4.11e-08 | 9 |
somite | 4.11e-08 | 9 |
myotome | 4.11e-08 | 9 |
presomitic mesoderm | 4.11e-08 | 9 |
presumptive segmental plate | 4.11e-08 | 9 |
dermomyotome | 4.11e-08 | 9 |
trunk paraxial mesoderm | 4.11e-08 | 9 |
musculoskeletal system | 4.95e-08 | 32 |
musculature of body | 2.37e-07 | 10 |
dense mesenchyme tissue | 9.96e-07 | 11 |
paraxial mesoderm | 9.96e-07 | 11 |
presumptive paraxial mesoderm | 9.96e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.98e-23 | 3 |
muscle cancer | 3.98e-23 | 3 |
organ system cancer | 6.82e-12 | 6 |