FFCP PHASE1:Mm9::chr3:26230776..26230823,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=192167 | |EntrezGene=192167 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q99K10 | |UniProt=Q99K10 | ||
|association_with_transcript=7bp_to_NM_138666,uc008otc.1,uc008otd.1_5end | |association_with_transcript=7bp_to_NM_138666,uc008otc.1,uc008otd.1_5end | ||
|cluster_id=chr3:26230776..26230823,- | |||
|description=CAGE_peak_1_at_Nlgn1_5end | |description=CAGE_peak_1_at_Nlgn1_5end | ||
|id=chr3:26230776..26230823,- | |id=chr3:26230776..26230823,- | ||
|ontology_enrichment_celltype=CL:0000117!8.30e-14!23;CL:0000337!8.30e-14!23;CL:0000540!8.94e-11!33;CL:0000047!8.94e-11!33;CL:0000031!8.94e-11!33;CL:0000404!8.94e-11!33;CL:0000221!1.12e-08!44;CL:0000133!1.12e-08!44;CL:0002319!1.15e-08!43;CL:0000393!3.96e-07!39;CL:0000211!3.96e-07!39 | |ontology_enrichment_celltype=CL:0000117!8.30e-14!23;CL:0000337!8.30e-14!23;CL:0000540!8.94e-11!33;CL:0000047!8.94e-11!33;CL:0000031!8.94e-11!33;CL:0000404!8.94e-11!33;CL:0000221!1.12e-08!44;CL:0000133!1.12e-08!44;CL:0002319!1.15e-08!43;CL:0000393!3.96e-07!39;CL:0000211!3.96e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.78e-19,23;CL:0000337,7.78e-19,23;CL:0000540,1.46e-11,33;CL:0000047,1.46e-11,33;CL:0000031,1.46e-11,33;CL:0000404,1.46e-11,33;CL:0000393,1.46e-08,39;CL:0000211,1.46e-08,39;CL:0002319,1.97e-08,43;CL:0000221,4.65e-08,44;CL:0000133,4.65e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.25e-26!71;UBERON:0003075!1.25e-26!71;UBERON:0007284!1.25e-26!71;UBERON:0000033!6.40e-25!63;UBERON:0003056!3.01e-24!49;UBERON:0001017!5.46e-24!73;UBERON:0005743!5.46e-24!73;UBERON:0000073!5.94e-23!75;UBERON:0001016!5.94e-23!75;UBERON:0001049!6.44e-23!52;UBERON:0005068!6.44e-23!52;UBERON:0006241!6.44e-23!52;UBERON:0007135!6.44e-23!52;UBERON:0004121!2.50e-22!102;UBERON:0000924!2.50e-22!102;UBERON:0006601!2.50e-22!102;UBERON:0000955!1.18e-21!50;UBERON:0006238!1.18e-21!50;UBERON:0002616!6.20e-21!49;UBERON:0002020!1.07e-20!34;UBERON:0003080!6.64e-19!40;UBERON:0002780!2.99e-18!39;UBERON:0001890!2.99e-18!39;UBERON:0006240!2.99e-18!39;UBERON:0002791!1.20e-17!29;UBERON:0003528!1.20e-17!29;UBERON:0001893!1.20e-17!29;UBERON:0007811!1.48e-16!86;UBERON:0000153!8.68e-16!94;UBERON:0000956!4.55e-13!21;UBERON:0001869!4.55e-13!21;UBERON:0000203!4.55e-13!21;UBERON:0002619!1.81e-10!17;UBERON:0002021!7.53e-09!10;UBERON:0000411!7.53e-09!10;UBERON:0001950!7.53e-09!10 | |ontology_enrichment_uberon=UBERON:0002346!1.25e-26!71;UBERON:0003075!1.25e-26!71;UBERON:0007284!1.25e-26!71;UBERON:0000033!6.40e-25!63;UBERON:0003056!3.01e-24!49;UBERON:0001017!5.46e-24!73;UBERON:0005743!5.46e-24!73;UBERON:0000073!5.94e-23!75;UBERON:0001016!5.94e-23!75;UBERON:0001049!6.44e-23!52;UBERON:0005068!6.44e-23!52;UBERON:0006241!6.44e-23!52;UBERON:0007135!6.44e-23!52;UBERON:0004121!2.50e-22!102;UBERON:0000924!2.50e-22!102;UBERON:0006601!2.50e-22!102;UBERON:0000955!1.18e-21!50;UBERON:0006238!1.18e-21!50;UBERON:0002616!6.20e-21!49;UBERON:0002020!1.07e-20!34;UBERON:0003080!6.64e-19!40;UBERON:0002780!2.99e-18!39;UBERON:0001890!2.99e-18!39;UBERON:0006240!2.99e-18!39;UBERON:0002791!1.20e-17!29;UBERON:0003528!1.20e-17!29;UBERON:0001893!1.20e-17!29;UBERON:0007811!1.48e-16!86;UBERON:0000153!8.68e-16!94;UBERON:0000956!4.55e-13!21;UBERON:0001869!4.55e-13!21;UBERON:0000203!4.55e-13!21;UBERON:0002619!1.81e-10!17;UBERON:0002021!7.53e-09!10;UBERON:0000411!7.53e-09!10;UBERON:0001950!7.53e-09!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.57e-35,64;UBERON:0003075,7.57e-35,64;UBERON:0007284,7.57e-35,64;UBERON:0003056,8.05e-32,49;UBERON:0000073,2.03e-31,54;UBERON:0001049,9.39e-30,52;UBERON:0005068,9.39e-30,52;UBERON:0006241,9.39e-30,52;UBERON:0007135,9.39e-30,52;UBERON:0002020,4.81e-29,34;UBERON:0010371,4.59e-28,73;UBERON:0001017,2.97e-26,73;UBERON:0004121,4.29e-26,95;UBERON:0000924,4.29e-26,95;UBERON:0006601,4.29e-26,95;UBERON:0000955,1.40e-25,47;UBERON:0006238,1.40e-25,47;UBERON:0001016,4.88e-25,75;UBERON:0003528,9.99e-25,29;UBERON:0002791,9.99e-25,29;UBERON:0001893,9.99e-25,29;UBERON:0002616,1.34e-24,46;UBERON:0003080,2.41e-24,40;UBERON:0002780,1.95e-23,39;UBERON:0001890,1.95e-23,39;UBERON:0006240,1.95e-23,39;UBERON:0010314,2.86e-18,92;UBERON:0000956,3.02e-18,21;UBERON:0001869,3.02e-18,21;UBERON:0000203,3.02e-18,21;UBERON:0002619,1.44e-14,17;UBERON:0002021,7.65e-12,10;UBERON:0000411,7.65e-12,10;UBERON:0001950,7.65e-12,10;UBERON:0000970,4.53e-08,9;UBERON:0000019,4.53e-08,9;UBERON:0000047,4.53e-08,9;UBERON:0010312,4.53e-08,9;UBERON:0004088,4.53e-08,9;UBERON:0002104,4.53e-08,9;UBERON:0001456,4.53e-08,9;UBERON:0003072,4.53e-08,9;UBERON:0004128,4.53e-08,9;UBERON:0003071,4.53e-08,9;UBERON:0002420,1.45e-07,8;UBERON:0007245,1.45e-07,8;UBERON:0010009,1.45e-07,8;UBERON:0010011,1.45e-07,8;UBERON:0000454,1.45e-07,8;UBERON:0000025,1.63e-07,114 | |||
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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0,1.55543919259427,0.279972843250725,0,0,0,0,0,0,0,5.46254444320914,5.28990979272033,3.1691570175309,0,0,0,0,0,0.599200221036809,0.768436610643109,11.3021677416241,8.91039192989158,9.88527318351495,5.71301968807607,4.41737081903227,4.40966877173835,3.06705507258356,4.5960939330501,4.40463523997555,6.00130489000382,4.76180253094355,3.95658863190582,5.48925861614458,5.73004707612436,6.14202597803038,6.75315132038016,9.62628960993904,9.72274332063103,9.25415925194169,5.77838282058432,0.075726193333184,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,9.58660092190865,15.5550204958333,2.76439574648302,17.5562563394199,17.6443665557928,5.61027720310812,9.08551073179443,1.01839363850316,0.124406970610093,0,1.47309299120532,3.90361328888111,4.59804208866946,5.40186389416048,12.9606143338715,14.8999933141408,11.4021211053516,12.5560310910037,4.65666067330228,0.215567992932842,0,0.703804496655795,1.09597866213787,2.50242524303038,0,0.411564272815887,0.995171334092466,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,20.8187049078486,14.9211687949962,0,0,0.426576501070468,2.78684006232526,1.15980715189884,0.605050573870028,1.11189021922435,0.760902504450237,0.474529061544512,0.823494773620054,0.754005626400808,0.198956472041151,0.19496408711912,0,0,0,0,0.342745537829186,1.1270773567308,0,0,0.0701358198903186,0.442655759869801,0.295220295959204,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.488894929326078,0.509235257325564,0.704070744865506,1.00503754465089,1.19021820443007,0.390267295715598,1.7339865851681,1.32878813789265,0.956728611944923,0.163863314715738,0,0,0,0,0,0.551873492609465,4.0137647496948,4.33683240391152,0,0.252470927204373,0.631016438832513,0.780877488593277,0.430846795465598,0,0,0,0.404810701674894,0.584511715822624,1.58115111178609,14.4594592389813,0.567760340833074,0.890328018336276,0.81443479676788,0.824850614862677,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,1.98067203434441,0.517434735131018,0.214337035031592,1.41872186913819,1.42695054081656,0.658196082408484,1.2178597964584,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.648032044930808,0.209088296014469,1.09181281873089,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0.516639293910924,0.168956125490778,0.58678619322877,0.39061315453185,0,0,0,0.948033361884535,0,0.205421914329655,0.51968329191118,0.537080087002444,0,0.240390899039938,0.147689527174577,0.201932899896295,0.381034033274999,0.100826185136841,0.487289403698762,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0.428736758158132,0.501572104035363,29.9318476587045,22.0956113523445,18.3326564300607,16.6697586873377,18.4972280338073,13.5970901530146,20.925697507186,21.1650965515384,19.0319811773366,19.1571315348173,0.103787347584177,1.19707462020309,1.70733605754134,2.43106717068294,0.838452650511929,0.735374033800057,1.55572709461131,2.67845574410562,2.24643446714271,2.02157769411038,3.54871019846336,3.58390048633545,2.1537546718073,2.43295579138503,1.78049953762401,2.38146845641537,2.78122382267653,2.31491064556446,3.29668720642645,3.09117732282234,2.40008476669791,3.19456451086807,2.14592570952589,2.61623549938191,1.78807822789128,1.86152137361688,3.84148743032822,1.57841826862706,1.22223702461276,1.68342681497322,1.54225523561426,2.1670986122624,2.45538625901814,1.39443157067369,1.15743966588685,1.74867404556562,0.701794825336225,1.50409737833809,0.765153328275374,0.220591419119515,0.231867835620421 | ||
|short_description=p1@Nlgn1 | |short_description=p1@Nlgn1 | ||
}} | }} |
Latest revision as of 21:45, 1 October 2015
Short description: | p1@Nlgn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nlgn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 7bp_to_NM_138666, uc008otc.1, uc008otd.1_5end |
EntrezGene: | Nlgn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.78e-19 | 23 |
neuroblast (sensu Vertebrata) | 7.78e-19 | 23 |
neuron | 1.46e-11 | 33 |
neuronal stem cell | 1.46e-11 | 33 |
neuroblast | 1.46e-11 | 33 |
electrically signaling cell | 1.46e-11 | 33 |
electrically responsive cell | 1.46e-08 | 39 |
electrically active cell | 1.46e-08 | 39 |
neural cell | 1.97e-08 | 43 |
ectodermal cell | 4.65e-08 | 44 |
neurectodermal cell | 4.65e-08 | 44 |