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FFCP PHASE1:Mm9::chrX:50341252..50341255,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15452
|EntrezGene=15452
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=B1B0W8,P00493
|UniProt=B1B0W8,P00493
|association_with_transcript=0bp_to_NM_013556,uc009ter.1_5end
|association_with_transcript=0bp_to_NM_013556,uc009ter.1_5end
|cluster_id=chrX:50341252..50341255,+
|description=CAGE_peak_4_at_Hprt_5end
|description=CAGE_peak_4_at_Hprt_5end
|id=chrX:50341252..50341255,+
|id=chrX:50341252..50341255,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,9.23e-10,3;CL:0002614,3.59e-09,3;CL:0000117,9.33e-07,23;CL:0000337,9.33e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.88e-09!71;UBERON:0003075!2.88e-09!71;UBERON:0007284!2.88e-09!71;UBERON:0001049!2.22e-08!52;UBERON:0005068!2.22e-08!52;UBERON:0006241!2.22e-08!52;UBERON:0007135!2.22e-08!52;UBERON:0004121!3.40e-08!102;UBERON:0000924!3.40e-08!102;UBERON:0006601!3.40e-08!102;UBERON:0002616!5.48e-08!49;UBERON:0000073!6.28e-08!75;UBERON:0001016!6.28e-08!75;UBERON:0000955!6.48e-08!50;UBERON:0006238!6.48e-08!50;UBERON:0000033!7.48e-08!63;UBERON:0001017!1.76e-07!73;UBERON:0005743!1.76e-07!73
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.33e-19,54;UBERON:0001017,5.52e-16,73;UBERON:0001049,1.00e-15,52;UBERON:0005068,1.00e-15,52;UBERON:0006241,1.00e-15,52;UBERON:0007135,1.00e-15,52;UBERON:0001016,2.01e-15,75;UBERON:0002616,1.63e-12,46;UBERON:0000955,3.59e-12,47;UBERON:0006238,3.59e-12,47;UBERON:0002346,5.58e-12,64;UBERON:0003075,5.58e-12,64;UBERON:0007284,5.58e-12,64;UBERON:0002950,1.33e-11,4;UBERON:0001891,1.33e-11,4;UBERON:0009616,1.33e-11,4;UBERON:0010286,1.33e-11,4;UBERON:0004121,4.14e-11,95;UBERON:0000924,4.14e-11,95;UBERON:0006601,4.14e-11,95;UBERON:0010371,5.53e-10,73;UBERON:0004684,9.23e-10,3;UBERON:0002275,9.23e-10,3;UBERON:0003080,2.05e-09,40;UBERON:0002038,3.59e-09,3;UBERON:0009663,3.59e-09,3;UBERON:0009661,3.59e-09,3;UBERON:0000125,3.59e-09,3;UBERON:0002308,3.59e-09,3;UBERON:0002780,3.45e-08,39;UBERON:0001890,3.45e-08,39;UBERON:0006240,3.45e-08,39;UBERON:0010314,5.52e-08,92;UBERON:0002020,5.60e-08,34;UBERON:0003076,5.89e-08,12;UBERON:0003057,5.89e-08,12;UBERON:0000025,3.30e-07,114;UBERON:0003056,3.43e-07,49;UBERON:0001896,4.50e-07,2;UBERON:0002298,4.50e-07,2;UBERON:0005290,4.50e-07,2;UBERON:0010096,4.50e-07,2
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0.258246646883153,0.140788722151667,0.234064526321993,0.34243593645101,0.558405112967355,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,0.315462165358238,0.137114433605739,0,0.0850432901510698,0.0992909512008853,0,0.639969691173627,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0.61506478758457,0,0.288851619751275,0.498703936075477,0.816677425049476,0,0,0,0,0.683045484958446,0,1.00717454380462,0.506884656097573,0.367093504323363,0.782391344348039,0.65407546914134,0,0.388859798148567,0.279972843250725,1.43752564364972,0.167782606057736,0.725362142011344,0,0,0.286533439938757,0,0.404632921719196,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0,0,0.135005938331691,0.210324961351382,0.856952953211411,1.76694832761291,0.122490799214954,0.287536413054709,0,2.20231761998777,2.17068474744819,2.61131106535614,0.395658863190582,0.182975287204819,0,1.3959149950069,1.68828783009504,2.75036845998258,0.294628585473668,1.13897344639282,0.559198337475902,0.832988126665025,0.453429360640713,0.289864488701678,0,0.679971333707751,0.539703191637817,0.649776417447669,0,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.45673551887624,0.258937883647172,0.890652834388949,0.693941307064543,0.608930956624282,0.691846491768175,0.301445281105245,0.470354828542819,0,0.494389935468748,0.144599356919912,0.884610551949874,0.323533699894818,0.883366073841574,0,0,1.17112318804619,0.628340120440365,0.255457055208591,0.359445373517761,1.19980546198682,0.254140454146129,1.64769703345305,2.28750301409313,0.879580464790051,2.60736480288415,1.79000820131231,3.32460871295296,2.10913641988085,0.509196819251581,0.124406970610093,0.758168275301024,0.420883711772948,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.680364991513279,0.2562274405697,0.749613796477831,0.776110112217047,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,0,0,0.199034266818493,1.40442637462647,0,0,0.414251545071004,0.234526059981096,0.720248245844059,0.23674473558521,0.196764231747404,1.07986979021165,0.697601834251224,0.804820204198858,0.700592054203017,0.16455984991348,0.492502392237286,0.486412857275134,0.146199987425332,0,0.134206418760372,1.47202963994889,0.617427674275707,0.330418782983798,0.528901133327089,0.213288250535234,0.232236671860439,0.257734922644187,0.605050573870028,0,0.570676878337677,0,1.15289268306808,1.00534083520108,0.994782360205754,0.38992817423824,0,0.216138049874694,0.398282546508734,0,0,0,0.407302655690628,0.193952487167626,0.49095073923223,0.632365371242573,0,0.470996183524124,0.493588655687202,0.296452627087149,0.500535317148282,0.196558995113203,0.449724224769707,0.811440485554012,0.482354319504834,0.25462585178142,0,0.324270453550071,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.554259570499814,0.189491411770485,0.325929952884052,0.848725428875941,0.234690248288502,0.502518772325447,0,0.390267295715598,0.157635144106191,0.664394068946325,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,3.69266356971921,1.99259867206745,0.655739781506702,0.504941854408746,0.315508219416257,0.390438744296638,0.646270193198397,0,0.668396022247182,0.566153061577665,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0.178065603667255,0.651547837414304,0.164970122972535,0,0.242780636154981,0.604647113929502,0.565815239267694,0,0.614870295887855,0,0,0.712994756769443,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,1.07021290561242,0.329098041204242,0.608929898229199,0,0.42366414172764,0.220528398054962,0,0.645857706783622,0.542816324353403,0.238744688006273,0.328281799490123,0.582961673259701,2.41052892613663,0.170870880797853,0.412773735926445,0.370389054739423,0.565105371014073,0,0.457556346413045,0.849892149969277,0.419854356970974,0.414599921413271,0,0.474503990371703,0.203319467126849,0.324016022465404,0.418176592028937,0.655087691238533,0.269728692769641,0.0826534557253359,0.26175594198403,0.648074866458964,0.621339313086926,0,0.149516546043979,0.496375471371293,0.194451188344048,0.645799117388655,0.168956125490778,0.469428954583016,0.2604087696879,0.314578033277133,0.241584120826006,0.288030006257865,0.316011120628178,0.405450430580328,0.308132871494482,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0.504832249740738,0.228620419965,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,0.665957860122194,0.448569283047378,1.17519231454855,0.386379188064381,0,0.183151624267265,0,0.501572104035363,0.564751842617067,1.84130094602871,0,1.54667864109319,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,2.07104124700728,0,0,0.170733605754134,0,0.62883948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|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0.258246646883153,0.140788722151667,0.234064526321993,0.34243593645101,0.558405112967355,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,0.315462165358238,0.137114433605739,0,0.0850432901510698,0.0992909512008853,0,0.639969691173627,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0.61506478758457,0,0.288851619751275,0.498703936075477,0.816677425049476,0,0,0,0,0.683045484958446,0,1.00717454380462,0.506884656097573,0.367093504323363,0.782391344348039,0.65407546914134,0,0.388859798148567,0.279972843250725,1.43752564364972,0.167782606057736,0.725362142011344,0,0,0.286533439938757,0,0.404632921719196,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0,0,0.135005938331691,0.210324961351382,0.856952953211411,1.76694832761291,0.122490799214954,0.287536413054709,0,2.20231761998777,2.17068474744819,2.61131106535614,0.395658863190582,0.182975287204819,0,1.3959149950069,1.68828783009504,2.75036845998258,0.294628585473668,1.13897344639282,0.559198337475902,0.832988126665025,0.453429360640713,0.289864488701678,0,0.679971333707751,0.539703191637817,0.649776417447669,0,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.45673551887624,0.258937883647172,0.890652834388949,0.693941307064543,0.608930956624282,0.691846491768175,0.301445281105245,0.470354828542819,0,0.494389935468748,0.144599356919912,0.884610551949874,0.323533699894818,0.883366073841574,0,0,1.17112318804619,0.628340120440365,0.255457055208591,0.359445373517761,1.19980546198682,0.254140454146129,1.64769703345305,2.28750301409313,0.879580464790051,2.60736480288415,1.79000820131231,3.32460871295296,2.10913641988085,0.509196819251581,0.124406970610093,0.758168275301024,0.420883711772948,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.680364991513279,0.2562274405697,0.749613796477831,0.776110112217047,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,0,0,0.199034266818493,1.40442637462647,0,0,0.414251545071004,0.234526059981096,0.720248245844059,0.23674473558521,0.196764231747404,1.07986979021165,0.697601834251224,0.804820204198858,0.700592054203017,0.16455984991348,0.492502392237286,0.486412857275134,0.146199987425332,0,0.134206418760372,1.47202963994889,0.617427674275707,0.330418782983798,0.528901133327089,0.213288250535234,0.232236671860439,0.257734922644187,0.605050573870028,0,0.570676878337677,0,1.15289268306808,1.00534083520108,0.994782360205754,0.38992817423824,0,0.216138049874694,0.398282546508734,0,0,0,0.407302655690628,0.193952487167626,0.49095073923223,0.632365371242573,0,0.470996183524124,0.493588655687202,0.296452627087149,0.500535317148282,0.196558995113203,0.449724224769707,0.811440485554012,0.482354319504834,0.25462585178142,0,0.324270453550071,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.554259570499814,0.189491411770485,0.325929952884052,0.848725428875941,0.234690248288502,0.502518772325447,0,0.390267295715598,0.157635144106191,0.664394068946325,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,3.69266356971921,1.99259867206745,0.655739781506702,0.504941854408746,0.315508219416257,0.390438744296638,0.646270193198397,0,0.668396022247182,0.566153061577665,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0.178065603667255,0.651547837414304,0.164970122972535,0,0.242780636154981,0.604647113929502,0.565815239267694,0,0.614870295887855,0,0,0.712994756769443,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,1.07021290561242,0.329098041204242,0.608929898229199,0,0.42366414172764,0.220528398054962,0,0.645857706783622,0.542816324353403,0.238744688006273,0.328281799490123,0.582961673259701,2.41052892613663,0.170870880797853,0.412773735926445,0.370389054739423,0.565105371014073,0,0.457556346413045,0.849892149969277,0.419854356970974,0.414599921413271,0,0.474503990371703,0.203319467126849,0.324016022465404,0.418176592028937,0.655087691238533,0.269728692769641,0.0826534557253359,0.26175594198403,0.648074866458964,0.621339313086926,0,0.149516546043979,0.496375471371293,0.194451188344048,0.645799117388655,0.168956125490778,0.469428954583016,0.2604087696879,0.314578033277133,0.241584120826006,0.288030006257865,0.316011120628178,0.405450430580328,0.308132871494482,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0.504832249740738,0.228620419965,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,0.665957860122194,0.448569283047378,1.17519231454855,0.386379188064381,0,0.183151624267265,0,0.501572104035363,0.564751842617067,1.84130094602871,0,1.54667864109319,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,2.07104124700728,0,0,0.170733605754134,0,0.62883948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|short_description=p4@Hprt
|short_description=p4@Hprt
}}
}}

Latest revision as of 21:37, 1 October 2015

Short description:p4@Hprt
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Hprt_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 0bp_to_NM_013556, uc009ter.1_5end
EntrezGene:Hprt
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Hprt

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron9.23e-103
neuron of the substantia nigra3.59e-093
CNS neuron (sensu Vertebrata)9.33e-0723
neuroblast (sensu Vertebrata)9.33e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.33e-1954
central nervous system5.52e-1673
neural tube1.00e-1552
neural rod1.00e-1552
future spinal cord1.00e-1552
neural keel1.00e-1552
nervous system2.01e-1575
regional part of brain1.63e-1246
brain3.59e-1247
future brain3.59e-1247
neurectoderm5.58e-1264
neural plate5.58e-1264
presumptive neural plate5.58e-1264
regional part of midbrain1.33e-114
midbrain1.33e-114
presumptive midbrain1.33e-114
midbrain neural tube1.33e-114
ectoderm-derived structure4.14e-1195
ectoderm4.14e-1195
presumptive ectoderm4.14e-1195
ecto-epithelium5.53e-1073
raphe nuclei9.23e-103
reticular formation9.23e-103
anterior neural tube2.05e-0940
substantia nigra3.59e-093
telencephalic nucleus3.59e-093
midbrain nucleus3.59e-093
neural nucleus3.59e-093
nucleus of brain3.59e-093
regional part of forebrain3.45e-0839
forebrain3.45e-0839
future forebrain3.45e-0839
structure with developmental contribution from neural crest5.52e-0892
gray matter5.60e-0834
posterior neural tube5.89e-0812
chordal neural plate5.89e-0812
tube3.30e-07114
pre-chordal neural plate3.43e-0749
medulla oblongata4.50e-072
brainstem4.50e-072
myelencephalon4.50e-072
future myelencephalon4.50e-072
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