FFCP PHASE1:Mm9::chr16:32400811..32400820,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr16:32400811..32400820,+ to FFCP PHASE1:Mm9::chr16:32400811..32400820,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=277203 | |EntrezGene=277203 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q9H8,B2RWD4 | |UniProt=E9Q9H8,B2RWD4 | ||
|association_with_transcript=219bp_to_ENSMUST00000115149,NM_001160402,uc012ael.1_5end | |||
|cluster_id=chr16:32400811..32400820,+ | |||
|description=CAGE_peak_4_at_Tm4sf19_5end | |||
|id=chr16:32400811..32400820,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,6.41e-58,2;CL:0002194,1.10e-29,4;CL:0000766,1.10e-29,4;CL:0000234,1.10e-29,4;CL:0000576,1.10e-29,4;CL:0000235,1.10e-29,4;CL:0000864,1.10e-29,4;CL:0002009,1.10e-29,4;CL:0000040,1.10e-29,4;CL:0000559,1.10e-29,4;CL:0000473,1.59e-17,7;CL:0000557,1.59e-17,7;CL:0000839,5.52e-10,13;CL:0000763,2.56e-08,16;CL:0000738,6.83e-08,17;CL:0002087,6.83e-08,17;CL:0000049,3.58e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005418!1.60e-08!5;UBERON:0002472!1.60e-08!5;UBERON:0008784!1.60e-08!5;UBERON:0006058!1.60e-08!5;UBERON:0004709!1.60e-08!5;UBERON:0005420!1.60e-08!5;UBERON:0006057!1.60e-08!5;UBERON:0000978!1.60e-08!5;UBERON:0002103!1.60e-08!5;UBERON:0000376!1.60e-08!5;UBERON:0000154!1.60e-08!5;UBERON:0005730!1.60e-08!5;UBERON:0002529!4.37e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001343,6.78e-16,2;UBERON:0004910,6.78e-16,2;UBERON:0004909,6.78e-16,2;UBERON:0005154,6.78e-16,2;UBERON:0005295,6.78e-16,2;UBERON:0005297,6.78e-16,2;UBERON:0005294,6.78e-16,2;UBERON:0010141,6.78e-16,2;UBERON:0005891,6.78e-16,2;UBERON:0001301,4.56e-11,3;UBERON:0006555,4.56e-11,3;UBERON:0005103,4.56e-11,3;UBERON:0000083,4.56e-11,3;UBERON:0009201,4.56e-11,3;UBERON:0004819,4.56e-11,3;UBERON:0006553,4.56e-11,3;UBERON:0003074,4.56e-11,3;UBERON:0004871,4.56e-11,3;UBERON:0003060,4.56e-11,3;UBERON:0000080,1.23e-08,4;UBERON:0005904,1.23e-08,4;UBERON:0006947,1.23e-08,4;UBERON:0002120,1.23e-08,4;UBERON:0004054,1.23e-08,4;UBERON:0004875,1.23e-08,4;UBERON:0004876,1.23e-08,4;UBERON:0005721,1.23e-08,4;UBERON:0005754,1.23e-08,4;UBERON:0007297,1.23e-08,4;UBERON:0002371,2.56e-08,16;UBERON:0004122,3.64e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808834249737046,0.883366073841574,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36373244159177,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,1.50791283939272,1.63171705145613,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0,0.499621155875892,0.233931608445408,0.214871054048298,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808834249737046,0.883366073841574,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36373244159177,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,1.50791283939272,1.63171705145613,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0,0.499621155875892,0.233931608445408,0.214871054048298,0,0.441182838239031,0 | ||
|short_description=p4@Tm4sf19 | |||
}} | }} |
Latest revision as of 21:25, 1 October 2015
Short description: | p4@Tm4sf19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tm4sf19_5end |
Coexpression cluster: | NA |
Association with transcript: | 219bp_to_ENSMUST00000115149, NM_001160402, uc012ael.1_5end |
EntrezGene: | Tm4sf19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 6.41e-58 | 2 |
monopoietic cell | 1.10e-29 | 4 |
myeloid leukocyte | 1.10e-29 | 4 |
phagocyte | 1.10e-29 | 4 |
monocyte | 1.10e-29 | 4 |
macrophage | 1.10e-29 | 4 |
tissue-resident macrophage | 1.10e-29 | 4 |
macrophage dendritic cell progenitor | 1.10e-29 | 4 |
monoblast | 1.10e-29 | 4 |
promonocyte | 1.10e-29 | 4 |
defensive cell | 1.59e-17 | 7 |
granulocyte monocyte progenitor cell | 1.59e-17 | 7 |
myeloid lineage restricted progenitor cell | 5.52e-10 | 13 |
myeloid cell | 2.56e-08 | 16 |
leukocyte | 6.83e-08 | 17 |
nongranular leukocyte | 6.83e-08 | 17 |
common myeloid progenitor | 3.58e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
seminiferous tubule of testis | 6.78e-16 | 2 |
epithelium of male gonad | 6.78e-16 | 2 |
epithelium of gonad | 6.78e-16 | 2 |
epithelial cord | 6.78e-16 | 2 |
sex cord | 6.78e-16 | 2 |
testis sex cord | 6.78e-16 | 2 |
genital ridge | 6.78e-16 | 2 |
primitive sex cord of indifferent gonad | 6.78e-16 | 2 |
coelomic epithelium | 6.78e-16 | 2 |
epididymis | 4.56e-11 | 3 |
excretory tube | 4.56e-11 | 3 |
mesonephric epithelium | 4.56e-11 | 3 |
mesonephric tubule | 4.56e-11 | 3 |
nephric duct | 4.56e-11 | 3 |
kidney epithelium | 4.56e-11 | 3 |
renal duct | 4.56e-11 | 3 |
mesonephric duct | 4.56e-11 | 3 |
somatic layer of lateral plate mesoderm | 4.56e-11 | 3 |
pronephric duct | 4.56e-11 | 3 |
mesonephros | 1.23e-08 | 4 |
duct of male reproductive system | 1.23e-08 | 4 |
male genital duct | 1.23e-08 | 4 |
pronephros | 1.23e-08 | 4 |
internal male genitalia | 1.23e-08 | 4 |
nephrogenic cord | 1.23e-08 | 4 |
urogenital ridge | 1.23e-08 | 4 |
pronephric mesoderm | 1.23e-08 | 4 |
rostral part of nephrogenic cord | 1.23e-08 | 4 |
presumptive pronephric mesoderm | 1.23e-08 | 4 |
bone marrow | 2.56e-08 | 16 |
genitourinary system | 3.64e-07 | 5 |