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FFCP PHASE1:Mm9::chr3:16083177..16083206,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=229096
|EntrezGene=229096
|HGNC=
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=Q8BYK6
|UniProt=Q8BYK6
|association_with_transcript=0bp_to_ENSMUST00000108345,ENSMUST00000108346,NM_001145919,NM_172677,NR_027375,uc008org.2,uc008orh.2,uc008ori.2_5end
|association_with_transcript=0bp_to_ENSMUST00000108345,ENSMUST00000108346,NM_001145919,NM_172677,NR_027375,uc008org.2,uc008orh.2,uc008ori.2_5end
|cluster_id=chr3:16083177..16083206,+
|description=CAGE_peak_2_at_Ythdf3_5end
|description=CAGE_peak_2_at_Ythdf3_5end
|id=chr3:16083177..16083206,+
|id=chr3:16083177..16083206,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!2.30e-07!23;UBERON:0000974!2.30e-07!23;UBERON:0004807!2.30e-07!23;UBERON:0005058!2.30e-07!23;UBERON:0003351!2.30e-07!23;UBERON:0009113!2.30e-07!23;UBERON:0003295!2.30e-07!23;UBERON:0009722!2.30e-07!23;UBERON:0005562!2.30e-07!23;UBERON:0007690!2.30e-07!23;UBERON:0003408!4.75e-07!24;UBERON:0006562!9.89e-07!24;UBERON:0001557!9.89e-07!24;UBERON:0001042!9.89e-07!24;UBERON:0008814!9.89e-07!24;UBERON:0009145!9.89e-07!24
|ontology_enrichment_uberon=UBERON:0002370!2.30e-07!23;UBERON:0000974!2.30e-07!23;UBERON:0004807!2.30e-07!23;UBERON:0005058!2.30e-07!23;UBERON:0003351!2.30e-07!23;UBERON:0009113!2.30e-07!23;UBERON:0003295!2.30e-07!23;UBERON:0009722!2.30e-07!23;UBERON:0005562!2.30e-07!23;UBERON:0007690!2.30e-07!23;UBERON:0003408!4.75e-07!24;UBERON:0006562!9.89e-07!24;UBERON:0001557!9.89e-07!24;UBERON:0001042!9.89e-07!24;UBERON:0008814!9.89e-07!24;UBERON:0009145!9.89e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.30e-07,23;UBERON:0000974,2.30e-07,23;UBERON:0004807,2.30e-07,23;UBERON:0005058,2.30e-07,23;UBERON:0003351,2.30e-07,23;UBERON:0009113,2.30e-07,23;UBERON:0003295,2.30e-07,23;UBERON:0009722,2.30e-07,23;UBERON:0005562,2.30e-07,23;UBERON:0007690,2.30e-07,23;UBERON:0003408,4.75e-07,24;UBERON:0006562,9.89e-07,24;UBERON:0001557,9.89e-07,24;UBERON:0001042,9.89e-07,24;UBERON:0008814,9.89e-07,24;UBERON:0009145,9.89e-07,24
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|phase1_expression=7.04654927261093,10.1202868215415,12.2849794635175,13.0059610861937,10.0179145989269,9.40123922706583,7.94282978024787,11.4919757863003,21.6814632113567,14.7460651582856,7.87602653837323,6.78063351460359,15.4080656938085,14.5992072039726,1.66554880907831,2.02475267389826,4.19737126876888,6.30924330716475,5.89592064504677,4.2438965179803,6.29320347117916,2.18440092641948,1.82839852397255,3.99981056983517,2.75291137280604,5.16808767703518,6.8921919385452,6.67960821326256,4.3705386474966,6.30075324399827,4.43461021310609,5.08024538767705,2.46025915033828,0,5.77703239502549,2.99222361645286,6.12508068787107,31.808403936005,17.9707129240474,15.7057123192139,47.0585190424811,24.589637458504,29.6161315349004,4.40638862914521,5.06884656097573,8.07605709511399,3.12956537739216,1.52617609466313,0.878744730937887,2.13872888981712,3.3596741190087,0,12.2481302422148,15.9579671242496,9.74672017513146,5.40244815675489,5.44413535883638,6.18806510732931,6.27181028664753,3.70293685490423,3.80298842103708,1.0165335962074,2.66788438833342,3.5995988691256,1.97773272513395,2.8419204597844,2.39680088414724,1.53687322128622,6.32506635081714,3.91517221161903,5.67877395648731,3.71346279724945,5.30084498283872,7.34944795289724,5.36734637702124,4.5960939330501,1.10115880999389,3.44755812830007,4.76180253094355,4.61602007055678,3.7509933876988,1.56274011167028,4.18774498502071,4.50210088025344,5.65353516774197,8.54422897873636,6.12198227436143,5.03278503728312,9.31432177998164,7.3304413303582,8.69593466105033,6.88339101585109,9.51959867190851,3.77792234146472,9.09686984426737,8.51251085484938,3.93244376368905,2.38602451609281,3.11743205523443,2.12003744706204,5.21120653173718,7.69958864485907,20.3844191765317,7.11066703153331,4.5463118612355,4.05375784760158,4.04419556011827,5.36664234679582,6.99132285847364,4.30482203287992,2.25530924795977,3.34912026143355,2.53677046981664,4.82312449768392,5.76184664964954,3.14166478324189,7.16865406429684,11.7125479105128,1.76922110389975,3.39710384889559,3.97514733228708,3.87900202508178,7.45567044872489,3.22058876712702,3.97948742945565,4.85368404896324,10.543730956521,11.3981518888747,10.4197586199913,5.84183493678809,10.5225138648284,8.92145900001337,10.4294592115366,11.2514801225345,3.53239675751252,5.84068547043927,8.35082783572594,4.97627882440372,8.33985102831127,5.05060454127538,5.85541993332167,4.82794419310293,5.22180176435513,7.38453607395004,6.66757691683013,6.27757229395764,4.8724896771059,2.84573707812917,6.68260778091811,6.42960672570586,9.50136070485324,6.57587197282724,5.83899223373756,4.87553033131033,7.20237477427802,5.9710280045548,7.02213187313235,10.5512641917033,7.10408748488982,3.93538967817454,3.75241695969754,4.68161359798639,3.55117103377815,3.54175617145327,4.01094493507183,3.95307706075693,4.29237442239391,4.90414437942112,3.78487654801005,3.11918181750281,3.56702762001765,5.26319954731196,4.61055242111206,4.56301823785264,10.0939175310781,9.77593817603202,8.26046957459495,4.49565963328025,8.95810652247983,6.0381534683714,5.67016829817211,8.67239155880373,7.33847544688072,10.2721838100782,5.21981967698963,8.72904460037258,9.29940272560997,9.35095418593409,11.1129529657898,5.39291645192533,4.53889904736858,4.38110801159608,3.98302592001472,8.79713547094912,6.76246414038483,6.31319116320474,8.92181440971078,9.04752076585109,5.37510565556187,7.0852871030209,5.49495547444812,5.42947521255922,9.19003143970162,3.67059232575407,3.73462090715086,3.59779379815766,4.86864291332407,4.3411888755435,5.0925170356284,6.32931502391783,6.48540907100142,4.11842119782122,5.75072826109418,4.83783231969054,6.24075346229121,6.06189307073068,6.27890947326693,3.85954817090694,3.32555742299888,9.09558776498327,6.19266910479698,5.7713329163564,5.63256595892405,6.365237782789,4.76087281772027,4.48807390072937,4.57141917907954,5.3151525515706,2.87018583583477,2.94953966488328,4.31712454664739,4.19482269886384,3.01582567878545,3.26343410291226,7.37646409528554,5.79467167239938,5.61927064957272,5.86058432961016,4.59017847054691,4.03953483526997,5.67914794949262,5.0757036758563,2.58508077279359,7.64700153448166,6.23836287430704,8.49229592366497,6.8817819284732,7.01414058987149,9.48690667071656,8.9969968598106,4.68402281187286,5.1639025063504,9.12166972380026,6.59880491890142,1.32745138339963,6.06951590387454,3.62788268357701,4.52652191414155,4.72483028609236,7.07100840271033,5.94385074286909,3.99887102425256,5.70395805415554,6.32073515871632,3.16255825724996,6.18813259489121,3.06395645178409,5.58189391497062,2.19909762430683,2.7863814554107,4.78818630834139,3.92411398724555,4.44282355625727,3.95804433848979,6.57080782578389,8.68511490541663,9.04166432025344,5.27636009412736,6.62004149453213,5.91066664295927,6.56547892017251,7.2221995887827,6.99554007911642,5.37733375830478,5.12612642393558,6.60437977482312,6.11141940320049,4.33247451110789,3.14396723758358,2.28778173206523,16.6578861393978,18.4735917067229,15.8929969875087,1.90934123603023,6.01038387804157,5.48962561242491,5.40026704109006,4.18176592028937,4.36725127492355,4.5853877770839,4.87655388779482,5.49687478166462,5.83267379813068,5.59205381778233,9.01908701894705,7.92437694033088,5.46013018508422,5.83353565032143,6.07051170345336,5.91346439217724,7.3935060346825,8.98410255423256,6.29156066554265,6.03960302065015,10.0810502190253,13.2724670663835,3.04087822935246,4.93012594391171,5.06691209613401,6.80301443536429,7.74857283646933,9.85602686063745,9.59981926634752,11.5101752940888,11.812055031525,11.4941851055998,17.1525870101964,11.7378446801202,13.7914744574251,4.30787728868902,9.10142408833665,7.08739467214858,9.23365390002431,3.09103350451505,7.88266396894964,8.24182309202693,5.78794623513478,6.01886524842436,11.2950368523413,9.66682996665071,8.02053718815155,7.04598047609119,8.90607275701835,11.3309084608455,7.42524750254986,6.30449684513909,8.60970577069989,6.21312374102184,7.36890167847654,9.97562183502578,5.63420898988643,3.8897074730927,6.91723436672342,6.61836630420051,8.22312892865976,9.27157757575024,4.81378814387723,7.83361356467772,4.56262739802432,8.86543804514558,5.15028291084353,6.08238947846258,6.60507892989553,6.19181798667996,7.3007125345259,7.33055037762079,7.41754621445952,8.53753736779504,8.57173130963539,6.56660482789549,5.48403236878838,7.26732083161643,8.84628175904108,6.51532480765909,7.68297486065645,4.20911538300549,6.24698923690964,7.85599180320834,9.01626137743724,5.81176446015824,7.36615877705441,6.97215785336847,7.9091710502268,4.99621155875892,7.01794825336225,8.80971321598023,5.7386499620653,4.41182838239031,5.10109238364927
|short_description=p2@Ythdf3
|short_description=p2@Ythdf3
}}
}}

Latest revision as of 20:41, 1 October 2015

Short description:p2@Ythdf3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ythdf3_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 0bp_to_ENSMUST00000108345, ENSMUST00000108346, NM_001145919, NM_172677, NR_027375, uc008org.2, uc008orh.2, uc008ori.2_5end
EntrezGene:Ythdf3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ythdf3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.01
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.40
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.94
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.78
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.41
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.60
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.90
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I26.68
Ileum epithelium, pool1.CNhs13199.10252-104B94.37
Ileum epithelium, pool2.CNhs13232.10253-104C16.30
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G831.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G947.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H224.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H429.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.07
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.08
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.75
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.92
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.37
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D99.31
Mouse Schwann, donor2.CNhs12573.11746-123F97.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.37
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C15.76
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A87.17
aorta, adult.CNhs10498.46-23H111.71
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.54
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.42
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F18.92
cortex, adult.CNhs10473.12-14D510.43
cortex, neonate N30.CNhs11107.1392-42F211.25
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B25.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.35
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.98
epididymis, adult.CNhs10490.58-23B28.34
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C65.86
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D47.38
eyeball, neonate N00.CNhs11207.633-15C66.67
eyeball, neonate N01.CNhs11140.1532-43E76.28
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E26.68
forelimb, embryo E12.CNhs10600.359-14H26.43
forelimb, embryo E13.CNhs10589.384-1E29.50
forelimb, embryo E14.CNhs10577.413-26A86.58
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B57.20
gonad, embryo E13.CNhs11044.1564-45I65.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.55
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I94.68
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C83.54
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E34.90
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G13.57
heart, neonate N20.CNhs11127.821-26I65.26
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D24.56
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G19.78
intestinal mucosa, adult.CNhs10506.860-29I38.26
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I58.96
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D85.67
intestine, embryo E16.CNhs10585.463-22H48.67
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F710.27
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E98.73
intestine, neonate N06.CNhs11102.688-20B89.30
intestine, neonate N07.CNhs11095.720-20F29.35
intestine, neonate N10.CNhs11098.755-23A511.11
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G14.38
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F88.80
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C78.92
kidney, neonate N00.CNhs11214.646-21G79.05
kidney, neonate N10.CNhs11206.758-6D55.38
kidney, neonate N20.CNhs11113.832-19I17.09
kidney, neonate N25.CNhs11122.1353-25F35.49
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B29.19
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D74.87
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G46.33
liver, neonate N00.CNhs11117.641-24F46.49
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A36.06
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G29.10
lung, embryo E14.CNhs10604.404-26F86.19
lung, embryo E15.CNhs11020.432-17C55.77
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E54.57
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H24.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.59
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.65
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.49
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.49
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I49.12
oviduct, adult pregnant day01.CNhs10500.988-6G66.60
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F46.07
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E54.53
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G95.94
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E65.58
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G38.69
prostate, adult.CNhs10470.859-1F89.04
skin, adult.CNhs10492.30-1C35.28
skin, neonate N00.CNhs11124.650-25G46.62
skin, neonate N03.CNhs11215.662-22H35.91
skin, neonate N06.CNhs11097.693-20I56.57
skin, neonate N10.CNhs11108.762-6C47.22
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G25.13
spleen, embryo E16.CNhs11035.461-43C16.60
spleen, embryo E18.CNhs11011.1271-21F26.11
spleen, neonate N10.CNhs11116.752-24D14.33
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C918.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D315.89
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E36.01
stomach, embryo E15.CNhs10603.1252-16G85.49
stomach, embryo E16.CNhs11022.459-17D45.40
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B84.59
stomach, neonate N07.CNhs11210.718-18A94.88
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I15.83
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F57.92
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G55.83
testis, embryo E17.CNhs11029.486-18I56.07
testis, embryo E18.CNhs11027.503-18G55.91
testis, neonate N00.CNhs11189.1300-22B77.39
testis, neonate N07.CNhs11222.726-26I48.98
testis, neonate N10.CNhs11204.763-44D96.29
testis, neonate N20.CNhs11110.839-18H36.04
testis, neonate N30.CNhs11130.1391-42E210.08
thymus, adult.CNhs10471.38-12B513.27
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I24.93
thymus, embryo E16.CNhs11002.456-26C55.07
thymus, embryo E17.CNhs10581.478-18C16.80
thymus, embryo E18.CNhs10595.1273-19G47.75
thymus, neonate N02.CNhs11181.1541-43F89.86
thymus, neonate N03.CNhs11137.2104-43C79.60
thymus, neonate N06.CNhs11197.681-26C411.51
thymus, neonate N07.CNhs11211.713-19D311.81
thymus, neonate N10.CNhs11194.748-24E411.49
thymus, neonate N20.CNhs11186.820-7A217.15
thymus, neonate N25.CNhs11125.1362-25G711.74
thymus, neonate N30.CNhs11132.1393-42G213.79
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.23
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F57.88
uterus, adult.CNhs10509.92-27E58.24
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I87.37
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H25.63
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B16.92
whole body, embryo E16.CNhs10514.453-14F26.62
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.54
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.27
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.97
whole body, embryo E17.5.CNhs10513.490-9F97.91
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C28.81
whole body, neonate N01.CNhs10576.659-23C65.74
whole body, neonate N06.CNhs10515.692-21D14.41
whole body, neonate N10.CNhs10518.761-6B45.10





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thymus2.30e-0723
neck2.30e-0723
respiratory system epithelium2.30e-0723
hemolymphoid system gland2.30e-0723
pharyngeal epithelium2.30e-0723
thymic region2.30e-0723
pharyngeal gland2.30e-0723
entire pharyngeal arch endoderm2.30e-0723
thymus primordium2.30e-0723
early pharyngeal endoderm2.30e-0723
gland of gut4.75e-0724
pharynx9.89e-0724
upper respiratory tract9.89e-0724
chordate pharynx9.89e-0724
pharyngeal arch system9.89e-0724
pharyngeal region of foregut9.89e-0724
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