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FFCP PHASE1:Mm9::chr6:86145208..86145235,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:86145208..86145235,+
|DHSsupport=NA
|short_description=p2@Tgfa
|DPIdataset=NA
|description=CAGE_peak_2_at_Tgfa_5end
|association_with_transcript=-9bp_to_NM_031199,uc009crj.2,uc009crk.2_5end
|EntrezGene=21802
|EntrezGene=21802
|HGNC=
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=P48030,Q545E4
|UniProt=P48030,Q545E4
|association_with_transcript=-9bp_to_NM_031199,uc009crj.2,uc009crk.2_5end
|cluster_id=chr6:86145208..86145235,+
|description=CAGE_peak_2_at_Tgfa_5end
|id=chr6:86145208..86145235,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,1.15e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!6.44e-12!43;UBERON:0005409!8.68e-10!59;UBERON:0000344!7.19e-09!15;UBERON:0004111!6.04e-08!122;UBERON:0000025!1.15e-07!114;UBERON:0001242!1.33e-07!13;UBERON:0000060!1.33e-07!13;UBERON:0001262!1.33e-07!13;UBERON:0004786!1.33e-07!13;UBERON:0005177!1.57e-07!85;UBERON:0001007!2.57e-07!128;UBERON:0001555!2.57e-07!128;UBERON:0007026!2.57e-07!128;UBERON:0004119!5.23e-07!130;UBERON:0000925!5.23e-07!130;UBERON:0006595!5.23e-07!130;UBERON:0000481!6.47e-07!230
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.06e-13,31;UBERON:0011216,3.80e-10,194;UBERON:0000344,1.21e-09,15;UBERON:0005409,9.90e-09,47;UBERON:0001242,3.03e-08,13;UBERON:0001262,3.03e-08,13;UBERON:0004786,3.03e-08,13;UBERON:0001007,1.59e-07,116;UBERON:0001555,1.59e-07,116;UBERON:0007026,1.59e-07,116;UBERON:0004119,5.46e-07,118;UBERON:0000925,5.46e-07,118;UBERON:0006595,5.46e-07,118;UBERON:0004921,1.00e-06,114
|phase1_expression=0.640595388419176,9.07336059862339,14.5599756604652,8.77146212789807,9.01612313903425,5.20425742926858,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,7.51964387129011,10.782236210157,10.3361753540704,9.90752591165872,7.11055067863434,7.79096019771133,12.0974462284767,5.54326276638262,0,0.61506478758457,0,2.3108129580102,2.65975432573588,1.83752420636132,0,0,0,0,0,0,1.38486499773135,2.33166941804883,1.10128051297009,0,1.30815093828268,3.07560655828261,2.91644848611425,0.839918529752175,1.43752564364972,0,0,0,1.54355661621568,1.14613375975503,1.54701627683233,0.809265843438391,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,2.39680088414724,2.30530983192933,0.933206510776299,0.540023753326763,1.05162480675691,4.85606673486466,2.65042249141936,1.46988959057945,1.43768206527355,1.83843757322004,2.20231761998777,4.21368215681119,3.68655679814984,1.71452174049252,1.00636407962651,1.04182674111352,6.14202597803038,4.50210088025344,4.12555268997387,5.00868595305235,2.70506193518296,2.98239113320481,3.63485727999283,2.87171928405785,4.34796733052517,3.44169550792555,3.39985666853875,9.71465744948071,2.59910566979068,2.24013443548668,2.80888840263504,0,0,0,2.67602497575693,0,0,0,6.061749148314,5.06719730950197,4.04419556011827,5.25245846707676,0,3.85949561568544,0.520455980298408,1.52232739156071,2.07553947530453,2.71300752994721,2.11659672844269,3.89566433121994,13.8429181931249,0.144599356919912,0,0.485300549842228,1.10420759230197,0,5.59175283654366,1.17112318804619,2.93225389538837,8.43008282188352,0,0,0,2.24685959107234,6.8625090422794,12.942398267625,1.73824320192276,2.30143911597297,4.98691306942944,4.2182728397617,1.42575109390443,0.622034853050465,1.26361379216837,0.841767423545896,0,0,0.180062129805349,0.150704817835715,0.612328492361951,0,0.749613796477831,1.55222022443409,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0.834141747676794,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0,0.828503090142008,1.17263029990548,1.62055855314913,1.65721314909647,1.18058539048442,0.925602677324269,0.465067889500816,0.804820204198858,0.934122738937356,1.6455984991348,0.164167464079095,0.486412857275134,0.146199987425332,0,0,3.57492912559016,1.13195073617213,10.2429822724977,6.08236303326152,0.639864751605702,0,1.67527699718721,2.01683524623343,4.66993892074228,2.66315876557583,6.64340686162316,4.28217282282428,5.02670417600539,4.57599885694647,1.75467678407208,9.88701349519644,6.05186539649144,3.58454291857861,1.32767530667157,0.228497025219458,2.25415471346161,0.407302655690628,0.387904974335251,1.54298803758701,1.26473074248515,1.47610147979602,0.156998727841375,1.48076596706161,4.74324203339438,0.500535317148282,0.589676985339609,1.12431056192427,0.405720242777006,1.92941727801933,1.52775511068852,3.16465751195892,4.21551589615092,3.0201755450689,5.75072826109418,3.72140947668503,5.92871578917665,7.32478746046624,5.56131981917928,3.37710464954357,3.8798169934987,0.37898282354097,0.814824882210129,0.339490171550376,1.17345124144251,1.00503754465089,2.38043640886014,2.73187107000918,1.26108115284953,0.8858587585951,3.02964060449226,3.76885623846197,3.28101465545202,3.03763023021174,0,0,0,1.10374698521893,5.61927064957272,5.15731421005694,0,0,0,0,0.215423397732799,0.238968797952552,0.891194696329576,1.13230612315533,0,0.584511715822624,0.395287777946524,3.85585579706168,3.83238230062325,0.35613120733451,0.977321756121456,3.13443233647817,2.65490276679926,1.21390318077491,0.604647113929502,1.32023555829129,1.18120757152309,1.22974059177571,2.32585463851399,1.45413491791002,3.20847640546249,3.16036757935816,1.05418608574999,5.15677716240934,0.680879211507576,1.08036656418786,0.646793418913773,1.92903331528433,1.59606210278046,0.891844088010353,1.48094118541909,2.43571959291679,0.704015124191131,0.42366414172764,0.441056796109924,1.97863503529776,0.968786560175433,0.542816324353403,1.19372344003136,1.47726809770555,5.53813589596716,6.86073617438886,0,0.82554747185289,0.740778109478847,0.188368457004691,0.27338845544205,0.686334519619568,0.169978429993855,0.139951452323658,0.138199973804424,4.77335309007557,0.316335993581135,1.21991680276109,0.86404272657441,1.04544148007234,0.87345025498471,3.2367443132357,2.72756403893609,3.66458318777641,9.59150802359267,0,0,0.149516546043979,0.496375471371293,1.36115831840833,1.42075805825504,2.19642963138012,1.99507305697782,2.99470085141085,0.838874755405687,0,0,0.316011120628178,0.202725215290164,0.616265742988964,0,0,0.198681354781265,0,0,0,0.304827226619999,0,0,0.0962118416403295,0,3.62768613784338,0.443971906748129,0,0.167884616364078,2.51146472241848,2.25218970541418,2.74727436400898,3.85863082342319,1.50471631210609,0.564751842617067,0.460325236507177,1.14579102687879,1.89038500578056,0,1.5107877947794,1.35004500046361,1.35096360967266,1.35942722695261,0.51776031175182,0,0.399024873401031,0.512200817262403,1.45864030240976,0.419226325255965,0.735374033800057,1.33348036680969,0.824140228955577,0.64183841918363,1.26348605881899,1.77435509923168,0.754505365544305,1.68554713445788,1.28050304809739,1.37845125493472,1.90517476513229,1.39061191133827,1.35036454324594,0.412085900803307,1.32479028120958,1.02860775715625,0.70990322463735,1.1921809497366,1.45346416632329,0.658765662907314,0.846146078916765,0.548783918618318,0.789209134313529,1.08643291076689,1.12228454331548,1.89816028998679,1.47756723563345,0.818462086339379,0.929621047115796,0.964533054905707,1.49886346762768,2.33931608445408,0.859484216193193,0.57386499620653,0.661774257358546,0.463735671240843
|phase1_expression=0.640595388419176,9.07336059862339,14.5599756604652,8.77146212789807,9.01612313903425,5.20425742926858,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,7.51964387129011,10.782236210157,10.3361753540704,9.90752591165872,7.11055067863434,7.79096019771133,12.0974462284767,5.54326276638262,0,0.61506478758457,0,2.3108129580102,2.65975432573588,1.83752420636132,0,0,0,0,0,0,1.38486499773135,2.33166941804883,1.10128051297009,0,1.30815093828268,3.07560655828261,2.91644848611425,0.839918529752175,1.43752564364972,0,0,0,1.54355661621568,1.14613375975503,1.54701627683233,0.809265843438391,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,2.39680088414724,2.30530983192933,0.933206510776299,0.540023753326763,1.05162480675691,4.85606673486466,2.65042249141936,1.46988959057945,1.43768206527355,1.83843757322004,2.20231761998777,4.21368215681119,3.68655679814984,1.71452174049252,1.00636407962651,1.04182674111352,6.14202597803038,4.50210088025344,4.12555268997387,5.00868595305235,2.70506193518296,2.98239113320481,3.63485727999283,2.87171928405785,4.34796733052517,3.44169550792555,3.39985666853875,9.71465744948071,2.59910566979068,2.24013443548668,2.80888840263504,0,0,0,2.67602497575693,0,0,0,6.061749148314,5.06719730950197,4.04419556011827,5.25245846707676,0,3.85949561568544,0.520455980298408,1.52232739156071,2.07553947530453,2.71300752994721,2.11659672844269,3.89566433121994,13.8429181931249,0.144599356919912,0,0.485300549842228,1.10420759230197,0,5.59175283654366,1.17112318804619,2.93225389538837,8.43008282188352,0,0,0,2.24685959107234,6.8625090422794,12.942398267625,1.73824320192276,2.30143911597297,4.98691306942944,4.2182728397617,1.42575109390443,0.622034853050465,1.26361379216837,0.841767423545896,0,0,0.180062129805349,0.150704817835715,0.612328492361951,0,0.749613796477831,1.55222022443409,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0.834141747676794,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0,0.828503090142008,1.17263029990548,1.62055855314913,1.65721314909647,1.18058539048442,0.925602677324269,0.465067889500816,0.804820204198858,0.934122738937356,1.6455984991348,0.164167464079095,0.486412857275134,0.146199987425332,0,0,3.57492912559016,1.13195073617213,10.2429822724977,6.08236303326152,0.639864751605702,0,1.67527699718721,2.01683524623343,4.66993892074228,2.66315876557583,6.64340686162316,4.28217282282428,5.02670417600539,4.57599885694647,1.75467678407208,9.88701349519644,6.05186539649144,3.58454291857861,1.32767530667157,0.228497025219458,2.25415471346161,0.407302655690628,0.387904974335251,1.54298803758701,1.26473074248515,1.47610147979602,0.156998727841375,1.48076596706161,4.74324203339438,0.500535317148282,0.589676985339609,1.12431056192427,0.405720242777006,1.92941727801933,1.52775511068852,3.16465751195892,4.21551589615092,3.0201755450689,5.75072826109418,3.72140947668503,5.92871578917665,7.32478746046624,5.56131981917928,3.37710464954357,3.8798169934987,0.37898282354097,0.814824882210129,0.339490171550376,1.17345124144251,1.00503754465089,2.38043640886014,2.73187107000918,1.26108115284953,0.8858587585951,3.02964060449226,3.76885623846197,3.28101465545202,3.03763023021174,0,0,0,1.10374698521893,5.61927064957272,5.15731421005694,0,0,0,0,0.215423397732799,0.238968797952552,0.891194696329576,1.13230612315533,0,0.584511715822624,0.395287777946524,3.85585579706168,3.83238230062325,0.35613120733451,0.977321756121456,3.13443233647817,2.65490276679926,1.21390318077491,0.604647113929502,1.32023555829129,1.18120757152309,1.22974059177571,2.32585463851399,1.45413491791002,3.20847640546249,3.16036757935816,1.05418608574999,5.15677716240934,0.680879211507576,1.08036656418786,0.646793418913773,1.92903331528433,1.59606210278046,0.891844088010353,1.48094118541909,2.43571959291679,0.704015124191131,0.42366414172764,0.441056796109924,1.97863503529776,0.968786560175433,0.542816324353403,1.19372344003136,1.47726809770555,5.53813589596716,6.86073617438886,0,0.82554747185289,0.740778109478847,0.188368457004691,0.27338845544205,0.686334519619568,0.169978429993855,0.139951452323658,0.138199973804424,4.77335309007557,0.316335993581135,1.21991680276109,0.86404272657441,1.04544148007234,0.87345025498471,3.2367443132357,2.72756403893609,3.66458318777641,9.59150802359267,0,0,0.149516546043979,0.496375471371293,1.36115831840833,1.42075805825504,2.19642963138012,1.99507305697782,2.99470085141085,0.838874755405687,0,0,0.316011120628178,0.202725215290164,0.616265742988964,0,0,0.198681354781265,0,0,0,0.304827226619999,0,0,0.0962118416403295,0,3.62768613784338,0.443971906748129,0,0.167884616364078,2.51146472241848,2.25218970541418,2.74727436400898,3.85863082342319,1.50471631210609,0.564751842617067,0.460325236507177,1.14579102687879,1.89038500578056,0,1.5107877947794,1.35004500046361,1.35096360967266,1.35942722695261,0.51776031175182,0,0.399024873401031,0.512200817262403,1.45864030240976,0.419226325255965,0.735374033800057,1.33348036680969,0.824140228955577,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|short_description=p2@Tgfa
}}
}}

Latest revision as of 20:11, 1 October 2015

Short description:p2@Tgfa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Tgfa_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: -9bp_to_NM_031199, uc009crj.2, uc009crk.2_5end
EntrezGene:Tgfa
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Tgfa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.07
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I38.77
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.78
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I19.91
GP2+ M cell, pool3.CNhs13240.11847-124I27.11
Ileum epithelium, pool1.CNhs13199.10252-104B97.79
Ileum epithelium, pool2.CNhs13232.10253-104C112.10
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D93.63
Mouse Schwann, donor2.CNhs12573.11746-123F92.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.25
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I33.90
amnion, adult pregnant day17.5.CNhs10488.583-22A813.84
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H78.43
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F112.94
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I310.24
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E36.05
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A37.32
liver, neonate N25.CNhs11198.1368-26H15.56
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B13.88
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A35.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I73.83
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C96.86
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B83.24
stomach, neonate N07.CNhs11210.718-18A92.73
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I19.59
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.15e-0725

Uber anatomy
Ontology termp-valuen
intestine4.06e-1331
organ system subdivision3.80e-10194
mucosa1.21e-0915
gastrointestinal system9.90e-0947
intestinal mucosa3.03e-0813
wall of intestine3.03e-0813
gastrointestinal system mucosa3.03e-0813
digestive system1.59e-07116
digestive tract1.59e-07116
primitive gut1.59e-07116
endoderm-derived structure5.46e-07118
endoderm5.46e-07118
presumptive endoderm5.46e-07118
subdivision of digestive tract1.00e-06114
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