FFCP PHASE1:Mm9::chrX:34750993..34751005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=194854 | |EntrezGene=194854 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=161 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UKW5 | |UniProt=Q3UKW5 | ||
|association_with_transcript=30bp_to_ENSMUST00000101636,NM_001033234,uc009syk.1_5end | |||
|cluster_id=chrX:34750993..34751005,- | |||
|description=CAGE_peak_1_at_Gm9_5end | |||
|id=chrX:34750993..34751005,- | |||
|ontology_enrichment_celltype=CL:0000349!4.13e-15!3;CL:0000351!4.13e-15!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.61e-11,3;CL:0000351,4.61e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!6.62e-16!14;UBERON:0005631!2.67e-15!3;UBERON:0000478!2.67e-15!3;UBERON:0000158!2.67e-15!3;UBERON:0000358!4.13e-15!3;UBERON:0000307!4.13e-15!3;UBERON:0003133!5.92e-15!24;UBERON:0003135!8.47e-15!15;UBERON:0003101!7.88e-14!16;UBERON:0000079!7.88e-14!16;UBERON:0005156!1.04e-13!26;UBERON:0000990!1.04e-13!26;UBERON:0004176!5.65e-13!17;UBERON:0009196!5.65e-13!17;UBERON:0009117!5.65e-13!17;UBERON:0000991!3.25e-12!18;UBERON:0005564!3.25e-12!18;UBERON:0001987!6.66e-11!2;UBERON:0003124!6.66e-11!2;UBERON:0004340!6.66e-11!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.32e-23,3;UBERON:0000478,9.32e-23,3;UBERON:0000158,9.32e-23,3;UBERON:0001987,5.77e-16,2;UBERON:0003124,5.77e-16,2;UBERON:0004340,5.77e-16,2;UBERON:0003133,1.23e-14,24;UBERON:0005156,1.76e-13,26;UBERON:0000990,1.76e-13,26;UBERON:0000473,4.13e-13,14;UBERON:0003135,3.07e-12,15;UBERON:0003101,1.78e-11,16;UBERON:0000079,1.78e-11,16;UBERON:0000358,4.61e-11,3;UBERON:0000307,4.61e-11,3;UBERON:0007010,4.61e-11,3;UBERON:0004176,8.39e-11,17;UBERON:0009196,8.39e-11,17;UBERON:0009117,8.39e-11,17;UBERON:0000991,3.34e-10,18;UBERON:0005564,3.34e-10,18;UBERON:0000305,1.74e-08,1;UBERON:0005795,1.91e-08,4;UBERON:0000995,1.91e-08,4;UBERON:0003975,6.34e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.52484849691981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0803024838226,9.95610733059955,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6209539955253,0.448549638131936,0,0,0.258319646955462,0,0,1.0416350787516,1.36317147753424,2.65742532908607,13.8254403003775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.763129109192,0.358855426437903,19.306730881869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.52484849691981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0803024838226,9.95610733059955,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6209539955253,0.448549638131936,0,0,0.258319646955462,0,0,1.0416350787516,1.36317147753424,2.65742532908607,13.8254403003775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.763129109192,0.358855426437903,19.306730881869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p1@Gm9 | |||
}} | }} |
Latest revision as of 20:10, 1 October 2015
Short description: | p1@Gm9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm9_5end |
Coexpression cluster: | MCL_coexpression_mm9:161 |
Association with transcript: | 30bp_to_ENSMUST00000101636, NM_001033234, uc009syk.1_5end |
EntrezGene: | Gm9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.61e-11 | 3 |
trophoblast cell | 4.61e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.32e-23 | 3 |
extraembryonic structure | 9.32e-23 | 3 |
membranous layer | 9.32e-23 | 3 |
placenta | 5.77e-16 | 2 |
chorion | 5.77e-16 | 2 |
allantois | 5.77e-16 | 2 |
reproductive organ | 1.23e-14 | 24 |
reproductive structure | 1.76e-13 | 26 |
reproductive system | 1.76e-13 | 26 |
testis | 4.13e-13 | 14 |
male reproductive organ | 3.07e-12 | 15 |
male organism | 1.78e-11 | 16 |
male reproductive system | 1.78e-11 | 16 |
blastocyst | 4.61e-11 | 3 |
blastula | 4.61e-11 | 3 |
cleaving embryo | 4.61e-11 | 3 |
external genitalia | 8.39e-11 | 17 |
indifferent external genitalia | 8.39e-11 | 17 |
indifferent gonad | 8.39e-11 | 17 |
gonad | 3.34e-10 | 18 |
gonad primordium | 3.34e-10 | 18 |
amnion | 1.74e-08 | 1 |
embryonic uterus | 1.91e-08 | 4 |
uterus | 1.91e-08 | 4 |
internal female genitalia | 6.34e-07 | 5 |