FFCP PHASE1:Mm9::chr11:59356250..59356277,+: Difference between revisions
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|id=chr11:59356250..59356277,+
|short_description=p4@Nlrp3
|description=CAGE_peak_4_at_Nlrp3_5end
|association_with_transcript=0bp_to_ENSMUST00000149126_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=216799 | |EntrezGene=216799 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=296 | |||
|TSSclassifier=NA | |||
|UniProt=Q5SXI6 | |UniProt=Q5SXI6 | ||
|association_with_transcript=0bp_to_ENSMUST00000149126_5end | |||
|cluster_id=chr11:59356250..59356277,+ | |||
|description=CAGE_peak_4_at_Nlrp3_5end | |||
|id=chr11:59356250..59356277,+ | |||
|ontology_enrichment_celltype=CL:0000049!8.16e-12!19;CL:0000557!8.40e-10!7;CL:0000988!9.24e-08!32;CL:0002032!9.24e-08!32;CL:0000037!9.24e-08!32;CL:0000566!9.24e-08!32;CL:0000837!9.24e-08!32;CL:0000763!1.03e-07!16;CL:0002320!3.56e-07!46;CL:0000134!3.56e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.53e-15,7;CL:0000049,1.64e-13,19;CL:0002092,2.68e-12,3;CL:0002540,2.68e-12,3;CL:0000034,1.18e-10,97;CL:0002476,1.25e-09,2;CL:0002320,3.12e-09,46;CL:0000134,3.12e-09,46;CL:0000219,1.38e-07,54;CL:0000988,1.47e-07,32;CL:0002032,1.47e-07,32;CL:0000037,1.47e-07,32;CL:0000837,1.47e-07,32;CL:0000723,1.59e-07,91;CL:0000048,1.59e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.52e-12,3;DOID:4045,3.52e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.19e-14!16;UBERON:0001474!1.70e-09!22;UBERON:0004765!1.70e-09!22;UBERON:0001434!1.70e-09!22;UBERON:0002204!2.11e-09!32;UBERON:0002384!3.56e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.35e-15,16;UBERON:0002204,1.32e-13,32;UBERON:0001474,4.78e-11,22;UBERON:0004765,4.78e-11,22;UBERON:0001434,4.78e-11,22;UBERON:0002384,3.12e-09,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0.548457734422955,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18531630736908,1.5626706890476,1.0470474879476,13.5293242247133,6.83045484958446,1.94204141212461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2497492932035,2.96659908770092,1.4209602298922,0,0.384218305321555,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,10.4239158320151,5.99902730993408,11.5633906636489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,11.2354109970118,7.46308930632674,7.10408748488982,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486405680325106,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0,0.390267295715598,0,0,0.318909537314974,0,0.172684981865896,0.144649058581512,7.53956419696361,9.24639662491806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0,0.341741761595705,0,0.185194527369712,0,0,0,4.41943917984024,2.6590775941495,2.3493995546752,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0.548457734422955,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18531630736908,1.5626706890476,1.0470474879476,13.5293242247133,6.83045484958446,1.94204141212461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2497492932035,2.96659908770092,1.4209602298922,0,0.384218305321555,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,10.4239158320151,5.99902730993408,11.5633906636489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,11.2354109970118,7.46308930632674,7.10408748488982,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486405680325106,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0,0.390267295715598,0,0,0.318909537314974,0,0.172684981865896,0.144649058581512,7.53956419696361,9.24639662491806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0,0.341741761595705,0,0.185194527369712,0,0,0,4.41943917984024,2.6590775941495,2.3493995546752,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p4@Nlrp3 | |||
}} | }} |
Latest revision as of 19:22, 1 October 2015
Short description: | p4@Nlrp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nlrp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:296 |
Association with transcript: | 0bp_to_ENSMUST00000149126_5end |
EntrezGene: | Nlrp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.53e-15 | 7 |
common myeloid progenitor | 1.64e-13 | 19 |
bone marrow cell | 2.68e-12 | 3 |
mesenchymal stem cell of the bone marrow | 2.68e-12 | 3 |
stem cell | 1.18e-10 | 97 |
bone marrow macrophage | 1.25e-09 | 2 |
connective tissue cell | 3.12e-09 | 46 |
mesenchymal cell | 3.12e-09 | 46 |
motile cell | 1.38e-07 | 54 |
hematopoietic cell | 1.47e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.47e-07 | 32 |
hematopoietic stem cell | 1.47e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.47e-07 | 32 |
somatic stem cell | 1.59e-07 | 91 |
multi fate stem cell | 1.59e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.35e-15 | 16 |
musculoskeletal system | 1.32e-13 | 32 |
bone element | 4.78e-11 | 22 |
skeletal element | 4.78e-11 | 22 |
skeletal system | 4.78e-11 | 22 |
connective tissue | 3.12e-09 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.52e-12 | 3 |
muscle cancer | 3.52e-12 | 3 |