FFCP PHASE1:Mm9::chr11:59356232..59356249,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216799 | |EntrezGene=216799 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=296 | |||
|TSSclassifier=NA | |||
|UniProt=Q5SXI6 | |UniProt=Q5SXI6 | ||
|association_with_transcript=-8bp_to_ENSMUST00000149126_5end | |association_with_transcript=-8bp_to_ENSMUST00000149126_5end | ||
|cluster_id=chr11:59356232..59356249,+ | |||
|description=CAGE_peak_3_at_Nlrp3_5end | |description=CAGE_peak_3_at_Nlrp3_5end | ||
|id=chr11:59356232..59356249,+ | |id=chr11:59356232..59356249,+ | ||
|ontology_enrichment_celltype=CL:0000049!5.12e-09!19;CL:0000557!3.25e-08!7 | |ontology_enrichment_celltype=CL:0000049!5.12e-09!19;CL:0000557!3.25e-08!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.51e-14,7;CL:0000049,9.46e-13,19;CL:0002092,8.63e-12,3;CL:0002540,8.63e-12,3;CL:0002476,6.02e-09,2;CL:0000034,1.07e-08,97;CL:0002320,1.19e-08,46;CL:0000134,1.19e-08,46;CL:0000988,4.24e-07,32;CL:0002032,4.24e-07,32;CL:0000037,4.24e-07,32;CL:0000837,4.24e-07,32;CL:0000219,4.33e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.93e-12,3;DOID:4045,3.93e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.41e-11!16;UBERON:0001474!1.19e-09!22;UBERON:0004765!1.19e-09!22;UBERON:0001434!1.19e-09!22;UBERON:0002405!3.55e-09!70;UBERON:0002204!3.10e-08!32;UBERON:0000926!7.51e-07!193;UBERON:0004120!7.51e-07!193;UBERON:0006603!7.51e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.72e-15,16;UBERON:0002204,5.31e-13,32;UBERON:0001474,1.89e-10,22;UBERON:0004765,1.89e-10,22;UBERON:0001434,1.89e-10,22;UBERON:0002384,1.19e-08,46;UBERON:0002390,5.30e-07,45;UBERON:0003061,5.30e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0.411343300817216,0.42438965179803,0.0850432901510698,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,5.4409111995798,3.1253413780952,2.09409497589519,26.4704169613956,13.6609096991689,7.76816564849846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7997994345628,2.96659908770092,2.8419204597844,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.485300549842228,0,0,0,0,0,0,11.0229914545447,7.19883277192089,10.1656181658452,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,14.0442637462647,7.20574139921202,10.7982129770325,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0.333690211432188,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.486405680325106,0,1.43768206527355,0.372140947668503,0.936113019343682,0.505157755894224,0.538192240565737,0.482443521363367,0.554259570499814,0,0,0,0,0.167506257441816,0,0.585400943573396,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,3.01582567878545,10.3342079925555,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,1.03193433981611,1.11116716421827,0,0.136694227721025,0.686334519619568,2.54967644990783,3.49878630809145,2.07299960706636,0,0,0,0,0,0.436725127492355,0.134864346384821,0.247960367176008,0,0,0,0.56369293868419,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0.411343300817216,0.42438965179803,0.0850432901510698,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,5.4409111995798,3.1253413780952,2.09409497589519,26.4704169613956,13.6609096991689,7.76816564849846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7997994345628,2.96659908770092,2.8419204597844,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.485300549842228,0,0,0,0,0,0,11.0229914545447,7.19883277192089,10.1656181658452,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,14.0442637462647,7.20574139921202,10.7982129770325,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0.333690211432188,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.486405680325106,0,1.43768206527355,0.372140947668503,0.936113019343682,0.505157755894224,0.538192240565737,0.482443521363367,0.554259570499814,0,0,0,0,0.167506257441816,0,0.585400943573396,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,3.01582567878545,10.3342079925555,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,1.03193433981611,1.11116716421827,0,0.136694227721025,0.686334519619568,2.54967644990783,3.49878630809145,2.07299960706636,0,0,0,0,0,0.436725127492355,0.134864346384821,0.247960367176008,0,0,0,0.56369293868419,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p3@Nlrp3 | |short_description=p3@Nlrp3 | ||
}} | }} |
Latest revision as of 19:22, 1 October 2015
Short description: | p3@Nlrp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nlrp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:296 |
Association with transcript: | -8bp_to_ENSMUST00000149126_5end |
EntrezGene: | Nlrp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.51e-14 | 7 |
common myeloid progenitor | 9.46e-13 | 19 |
bone marrow cell | 8.63e-12 | 3 |
mesenchymal stem cell of the bone marrow | 8.63e-12 | 3 |
bone marrow macrophage | 6.02e-09 | 2 |
stem cell | 1.07e-08 | 97 |
connective tissue cell | 1.19e-08 | 46 |
mesenchymal cell | 1.19e-08 | 46 |
hematopoietic cell | 4.24e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.24e-07 | 32 |
hematopoietic stem cell | 4.24e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.24e-07 | 32 |
motile cell | 4.33e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.72e-15 | 16 |
musculoskeletal system | 5.31e-13 | 32 |
bone element | 1.89e-10 | 22 |
skeletal element | 1.89e-10 | 22 |
skeletal system | 1.89e-10 | 22 |
connective tissue | 1.19e-08 | 46 |
hematopoietic system | 5.30e-07 | 45 |
blood island | 5.30e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.93e-12 | 3 |
muscle cancer | 3.93e-12 | 3 |