FFCP PHASE1:Mm9::chr5:120121262..120121282,+: Difference between revisions
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{{FFCP|EntrezGene=21386|HGNC=|MCL_coexpression_id=994|UniProt=P70324|association_with_transcript=235bp_to_ENSMUST00000018748_5end|description=CAGE_peak_6_at_Tbx3_5end|id=chr5:120121262..120121282,+|ontology_enrichment_celltype=CL:0000107!1.62e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.97e-12,9;CL:0000239,4.49e-09,6;CL:0000677,4.49e-09,6;CL:0000584,4.49e-09,6;CL:0000075,1.17e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!2.37e-13!27;UBERON:0002048!1.04e-08!14;UBERON:0000117!1.04e-08!14;UBERON:0000171!1.04e-08!14;UBERON:0000170!1.04e-08!14;UBERON:0005597!1.04e-08!14;UBERON:0000118!1.04e-08!14;UBERON:0002410!1.62e-07!9;UBERON:0005153!1.86e-07!17;UBERON:0002342!2.24e-07!10;UBERON:0005062!2.24e-07!10;UBERON:0003064!9.58e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005157,4.65e-16,20;UBERON:0002410,1.97e-12,9;UBERON:0002048,4.94e-12,14;UBERON:0000117,4.94e-12,14;UBERON:0000171,4.94e-12,14;UBERON:0000170,4.94e-12,14;UBERON:0005597,4.94e-12,14;UBERON:0000118,4.94e-12,14;UBERON:0005153,1.35e-11,17;UBERON:0001242,6.46e-11,13;UBERON:0001262,6.46e-11,13;UBERON:0004786,6.46e-11,13;UBERON:0000010,7.76e-10,11;UBERON:0005178,1.89e-09,17;UBERON:0005181,1.89e-09,17;UBERON:0002224,1.89e-09,17;UBERON:0000915,1.89e-09,17;UBERON:0008947,1.89e-09,17;UBERON:0003258,1.89e-09,17;UBERON:0000160,3.15e-09,31;UBERON:0000344,3.71e-09,15;UBERON:0003064,1.49e-08,14;UBERON:0002108,8.19e-07,4|phase1_expression=0,1.39590163055744,3.63999391511629,3.0246421130683,2.50447864973174,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.47997726838022,0.68822784320151,1.14846392823004,3.4460959692726,2.37018355954478,9.88121781173144,2.52030129759931,1.77384408524244,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.629484089877886,0.304130793658544,0.550640256485045,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0,0,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,4.00793775475027,0.520455980298408,1.82679286987285,0.922461989024234,2.11011696773672,2.82212897125692,4.27266410520897,0,0.144599356919912,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,2.24046600470696,0.497627882440372,0,0,0.260240885925407,0,0,0,0.136072998302656,0.12811372028485,0.468508622798644,0,0,0,0,0.657587197282725,0.556094498451196,0,0,1.39323986772945,0,0,0,0,0.234526059981096,0,0,0,0,0.465067889500816,0.268273401399619,0.350296027101508,0,0.32833492815819,0.324275238183423,0.146199987425332,0.439100230582101,0.134206418760372,0,0.205809224758569,4.29544417878937,0.528901133327089,0,0.464473343720877,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,2.37264530772256,0.658795818896044,0.502670417600539,0.397912944082302,0.38992817423824,1.79763881730844,1.08069024937347,1.99141273254367,0.569003702859245,1.25673363870702,0,0.407302655690628,0.775809948670503,1.1221731182451,1.26473074248515,0.442830443938806,0.31399745568275,0.493588655687202,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,2.58654466233247,0.37898282354097,0.977789858652155,0.848725428875941,1.87752198630802,1.00503754465089,2.38043640886014,3.12213836572478,3.15270288212382,3.76489972402917,3.6674596791222,2.45794972073607,1.20879487306127,3.03763023021174,0,0,0,0,0,0.117211686592203,0,0.252470927204373,5.36363973007636,5.0757036758563,5.38558494331997,0.955875191810208,3.11918143715352,1.69845918473299,6.8817819284732,6.42962887404886,4.34816555741176,0,0.425820255624806,2.67098405500883,2.76907830901079,0.659880491890142,0,0.485561272309963,0,0,0.295301892880773,0,0.258428293168221,0,0,0,1.05418608574999,0,0,0.540183282093931,0.517434735131018,0.643011105094777,0.177340233642274,0.891844088010353,0.493647061806363,0.304464949114599,2.3467170806371,0.63549621259146,4.6310963591542,0,0.322928853391811,0.180938774784468,0,0,1.45740418314925,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.627264888043406,0.436725127492355,0.269728692769641,0.578574190077352,0.26175594198403,0.90730481304255,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0,0.117357238645754,0.39061315453185,0,0,0.288030006257865,0,0,0,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,2.51146472241848,0.563047426353546,0.73260649706906,0.214368379079066,7.02200945649509,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0.798049746802062,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0,0.758091635291392,0.50695859978048,0.377252682772152,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.354951612318675,0,0.290692833264657,0.188218760830661,0.423073039458382,0.182927972872773,0.263069711437843,0,1.68342681497322,0.355905054372522,0.492522411877817,0.409231043169689,0.154936841185966,0,0.499621155875892,0.467863216890817,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p6@Tbx3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21386 | |||
|HGNC= | |||
|MCL_coexpression_id=994 | |||
|TSSclassifier=NA | |||
|UniProt=P70324 | |||
|association_with_transcript=235bp_to_ENSMUST00000018748_5end | |||
|cluster_id=chr5:120121262..120121282,+ | |||
|description=CAGE_peak_6_at_Tbx3_5end | |||
|id=chr5:120121262..120121282,+ | |||
|ontology_enrichment_celltype=CL:0000107!1.62e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.97e-12,9;CL:0000239,4.49e-09,6;CL:0000677,4.49e-09,6;CL:0000584,4.49e-09,6;CL:0000075,1.17e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!2.37e-13!27;UBERON:0002048!1.04e-08!14;UBERON:0000117!1.04e-08!14;UBERON:0000171!1.04e-08!14;UBERON:0000170!1.04e-08!14;UBERON:0005597!1.04e-08!14;UBERON:0000118!1.04e-08!14;UBERON:0002410!1.62e-07!9;UBERON:0005153!1.86e-07!17;UBERON:0002342!2.24e-07!10;UBERON:0005062!2.24e-07!10;UBERON:0003064!9.58e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005157,4.65e-16,20;UBERON:0002410,1.97e-12,9;UBERON:0002048,4.94e-12,14;UBERON:0000117,4.94e-12,14;UBERON:0000171,4.94e-12,14;UBERON:0000170,4.94e-12,14;UBERON:0005597,4.94e-12,14;UBERON:0000118,4.94e-12,14;UBERON:0005153,1.35e-11,17;UBERON:0001242,6.46e-11,13;UBERON:0001262,6.46e-11,13;UBERON:0004786,6.46e-11,13;UBERON:0000010,7.76e-10,11;UBERON:0005178,1.89e-09,17;UBERON:0005181,1.89e-09,17;UBERON:0002224,1.89e-09,17;UBERON:0000915,1.89e-09,17;UBERON:0008947,1.89e-09,17;UBERON:0003258,1.89e-09,17;UBERON:0000160,3.15e-09,31;UBERON:0000344,3.71e-09,15;UBERON:0003064,1.49e-08,14;UBERON:0002108,8.19e-07,4 | |||
|phase1_expression=0,1.39590163055744,3.63999391511629,3.0246421130683,2.50447864973174,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.47997726838022,0.68822784320151,1.14846392823004,3.4460959692726,2.37018355954478,9.88121781173144,2.52030129759931,1.77384408524244,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.629484089877886,0.304130793658544,0.550640256485045,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0,0,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,4.00793775475027,0.520455980298408,1.82679286987285,0.922461989024234,2.11011696773672,2.82212897125692,4.27266410520897,0,0.144599356919912,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,2.24046600470696,0.497627882440372,0,0,0.260240885925407,0,0,0,0.136072998302656,0.12811372028485,0.468508622798644,0,0,0,0,0.657587197282725,0.556094498451196,0,0,1.39323986772945,0,0,0,0,0.234526059981096,0,0,0,0,0.465067889500816,0.268273401399619,0.350296027101508,0,0.32833492815819,0.324275238183423,0.146199987425332,0.439100230582101,0.134206418760372,0,0.205809224758569,4.29544417878937,0.528901133327089,0,0.464473343720877,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,2.37264530772256,0.658795818896044,0.502670417600539,0.397912944082302,0.38992817423824,1.79763881730844,1.08069024937347,1.99141273254367,0.569003702859245,1.25673363870702,0,0.407302655690628,0.775809948670503,1.1221731182451,1.26473074248515,0.442830443938806,0.31399745568275,0.493588655687202,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,2.58654466233247,0.37898282354097,0.977789858652155,0.848725428875941,1.87752198630802,1.00503754465089,2.38043640886014,3.12213836572478,3.15270288212382,3.76489972402917,3.6674596791222,2.45794972073607,1.20879487306127,3.03763023021174,0,0,0,0,0,0.117211686592203,0,0.252470927204373,5.36363973007636,5.0757036758563,5.38558494331997,0.955875191810208,3.11918143715352,1.69845918473299,6.8817819284732,6.42962887404886,4.34816555741176,0,0.425820255624806,2.67098405500883,2.76907830901079,0.659880491890142,0,0.485561272309963,0,0,0.295301892880773,0,0.258428293168221,0,0,0,1.05418608574999,0,0,0.540183282093931,0.517434735131018,0.643011105094777,0.177340233642274,0.891844088010353,0.493647061806363,0.304464949114599,2.3467170806371,0.63549621259146,4.6310963591542,0,0.322928853391811,0.180938774784468,0,0,1.45740418314925,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.627264888043406,0.436725127492355,0.269728692769641,0.578574190077352,0.26175594198403,0.90730481304255,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0,0.117357238645754,0.39061315453185,0,0,0.288030006257865,0,0,0,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,2.51146472241848,0.563047426353546,0.73260649706906,0.214368379079066,7.02200945649509,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0.798049746802062,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0,0.758091635291392,0.50695859978048,0.377252682772152,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.354951612318675,0,0.290692833264657,0.188218760830661,0.423073039458382,0.182927972872773,0.263069711437843,0,1.68342681497322,0.355905054372522,0.492522411877817,0.409231043169689,0.154936841185966,0,0.499621155875892,0.467863216890817,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p6@Tbx3 | |||
}} |
Latest revision as of 18:36, 1 October 2015
Short description: | p6@Tbx3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tbx3_5end |
Coexpression cluster: | MCL_coexpression_mm9:994 |
Association with transcript: | 235bp_to_ENSMUST00000018748_5end |
EntrezGene: | Tbx3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.97e-12 | 9 |
brush border epithelial cell | 4.49e-09 | 6 |
gut absorptive cell | 4.49e-09 | 6 |
enterocyte | 4.49e-09 | 6 |
columnar/cuboidal epithelial cell | 1.17e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelial fold | 4.65e-16 | 20 |
autonomic nervous system | 1.97e-12 | 9 |
lung | 4.94e-12 | 14 |
respiratory tube | 4.94e-12 | 14 |
respiration organ | 4.94e-12 | 14 |
pair of lungs | 4.94e-12 | 14 |
lung primordium | 4.94e-12 | 14 |
lung bud | 4.94e-12 | 14 |
epithelial bud | 1.35e-11 | 17 |
intestinal mucosa | 6.46e-11 | 13 |
wall of intestine | 6.46e-11 | 13 |
gastrointestinal system mucosa | 6.46e-11 | 13 |
peripheral nervous system | 7.76e-10 | 11 |
thoracic cavity element | 1.89e-09 | 17 |
thoracic segment organ | 1.89e-09 | 17 |
thoracic cavity | 1.89e-09 | 17 |
thoracic segment of trunk | 1.89e-09 | 17 |
respiratory primordium | 1.89e-09 | 17 |
endoderm of foregut | 1.89e-09 | 17 |
intestine | 3.15e-09 | 31 |
mucosa | 3.71e-09 | 15 |
intermediate mesoderm | 1.49e-08 | 14 |
small intestine | 8.19e-07 | 4 |