FFCP PHASE1:Mm9::chr1:89700472..89700481,+: Difference between revisions
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{{FFCP|EntrezGene=20215|HGNC=|MCL_coexpression_id=16|UniProt=P20443,Q3UPX6,Q8BPV0,Q8C8Y8|association_with_transcript=217bp_to_ENSMUST00000077772,ENSMUST00000128761,ENSMUST00000130886,ENSMUST00000155393,ENSMUST00000156381,NM_009118,uc007bxp.1,uc007bxq.1,uc007bxr.1,uc007bxs.1_5end|description=CAGE_peak_4_at_Sag_5end|id=chr1:89700472..89700481,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!5.81e-30!9;UBERON:0000019!5.81e-30!9;UBERON:0000047!5.81e-30!9;UBERON:0004088!5.81e-30!9;UBERON:0002104!5.81e-30!9;UBERON:0001456!5.81e-30!9;UBERON:0003072!5.81e-30!9;UBERON:0003071!5.81e-30!9;UBERON:0004128!5.81e-30!9;UBERON:0001444!1.68e-24!11;UBERON:0000020!1.88e-22!12;UBERON:0001032!1.88e-22!12;UBERON:0004456!1.88e-22!12;UBERON:0005085!1.02e-20!13;UBERON:0003056!4.85e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.47e-48,9;UBERON:0000019,1.47e-48,9;UBERON:0000047,1.47e-48,9;UBERON:0010312,1.47e-48,9;UBERON:0004088,1.47e-48,9;UBERON:0002104,1.47e-48,9;UBERON:0001456,1.47e-48,9;UBERON:0003072,1.47e-48,9;UBERON:0004128,1.47e-48,9;UBERON:0003071,1.47e-48,9;UBERON:0001444,6.64e-40,11;UBERON:0000020,1.18e-36,12;UBERON:0001032,1.18e-36,12;UBERON:0004456,1.18e-36,12;UBERON:0000033,6.63e-34,13;UBERON:0005085,6.63e-34,13;UBERON:0007811,1.00e-12,36;UBERON:0000153,9.33e-11,43;UBERON:0003056,1.64e-09,49;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,45.0345571597054,0,0,0,0.30140963567143,1.2246569847239,4.99643509110914,5.34099829990454,113.05337301295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p4@Sag}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20215 | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=P20443,Q3UPX6,Q8BPV0,Q8C8Y8 | |||
|association_with_transcript=217bp_to_ENSMUST00000077772,ENSMUST00000128761,ENSMUST00000130886,ENSMUST00000155393,ENSMUST00000156381,NM_009118,uc007bxp.1,uc007bxq.1,uc007bxr.1,uc007bxs.1_5end | |||
|cluster_id=chr1:89700472..89700481,+ | |||
|description=CAGE_peak_4_at_Sag_5end | |||
|id=chr1:89700472..89700481,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!5.81e-30!9;UBERON:0000019!5.81e-30!9;UBERON:0000047!5.81e-30!9;UBERON:0004088!5.81e-30!9;UBERON:0002104!5.81e-30!9;UBERON:0001456!5.81e-30!9;UBERON:0003072!5.81e-30!9;UBERON:0003071!5.81e-30!9;UBERON:0004128!5.81e-30!9;UBERON:0001444!1.68e-24!11;UBERON:0000020!1.88e-22!12;UBERON:0001032!1.88e-22!12;UBERON:0004456!1.88e-22!12;UBERON:0005085!1.02e-20!13;UBERON:0003056!4.85e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.47e-48,9;UBERON:0000019,1.47e-48,9;UBERON:0000047,1.47e-48,9;UBERON:0010312,1.47e-48,9;UBERON:0004088,1.47e-48,9;UBERON:0002104,1.47e-48,9;UBERON:0001456,1.47e-48,9;UBERON:0003072,1.47e-48,9;UBERON:0004128,1.47e-48,9;UBERON:0003071,1.47e-48,9;UBERON:0001444,6.64e-40,11;UBERON:0000020,1.18e-36,12;UBERON:0001032,1.18e-36,12;UBERON:0004456,1.18e-36,12;UBERON:0000033,6.63e-34,13;UBERON:0005085,6.63e-34,13;UBERON:0007811,1.00e-12,36;UBERON:0000153,9.33e-11,43;UBERON:0003056,1.64e-09,49;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,45.0345571597054,0,0,0,0.30140963567143,1.2246569847239,4.99643509110914,5.34099829990454,113.05337301295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p4@Sag | |||
}} |
Latest revision as of 18:26, 1 October 2015
Short description: | p4@Sag |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sag_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 217bp_to_ENSMUST00000077772, ENSMUST00000128761, ENSMUST00000130886, ENSMUST00000155393, ENSMUST00000156381, NM_009118, uc007bxp.1, uc007bxq.1, uc007bxr.1, uc007bxs.1_5end |
EntrezGene: | Sag |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.47e-48 | 9 |
camera-type eye | 1.47e-48 | 9 |
simple eye | 1.47e-48 | 9 |
immature eye | 1.47e-48 | 9 |
ocular region | 1.47e-48 | 9 |
visual system | 1.47e-48 | 9 |
face | 1.47e-48 | 9 |
optic cup | 1.47e-48 | 9 |
optic vesicle | 1.47e-48 | 9 |
eye primordium | 1.47e-48 | 9 |
subdivision of head | 6.64e-40 | 11 |
sense organ | 1.18e-36 | 12 |
sensory system | 1.18e-36 | 12 |
entire sense organ system | 1.18e-36 | 12 |
head | 6.63e-34 | 13 |
ectodermal placode | 6.63e-34 | 13 |
craniocervical region | 1.00e-12 | 36 |
anterior region of body | 9.33e-11 | 43 |
pre-chordal neural plate | 1.64e-09 | 49 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |