FFCP PHASE1:Mm9::chr5:117041867..117041874,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68955 | |EntrezGene=68955 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1137 | |MCL_coexpression_id=1137 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BKA3 | |UniProt=Q8BKA3 | ||
|association_with_transcript=-41bp_to_ENSMUST00000076124,NM_026886,uc008zfc.1,uc008zfd.1_5end | |association_with_transcript=-41bp_to_ENSMUST00000076124,NM_026886,uc008zfc.1,uc008zfd.1_5end | ||
|cluster_id=chr5:117041867..117041874,- | |||
|description=CAGE_peak_3_at_Srrm4_5end | |description=CAGE_peak_3_at_Srrm4_5end | ||
|id=chr5:117041867..117041874,- | |id=chr5:117041867..117041874,- | ||
|ontology_enrichment_celltype=CL:0000540!1.90e-22!33;CL:0000047!1.90e-22!33;CL:0000031!1.90e-22!33;CL:0000404!1.90e-22!33;CL:0000393!8.16e-17!39;CL:0000211!8.16e-17!39;CL:0000117!1.31e-16!23;CL:0000337!1.31e-16!23;CL:0000221!1.57e-16!44;CL:0000133!1.57e-16!44;CL:0002319!2.65e-16!43;CL:0000055!4.30e-12!50 | |ontology_enrichment_celltype=CL:0000540!1.90e-22!33;CL:0000047!1.90e-22!33;CL:0000031!1.90e-22!33;CL:0000404!1.90e-22!33;CL:0000393!8.16e-17!39;CL:0000211!8.16e-17!39;CL:0000117!1.31e-16!23;CL:0000337!1.31e-16!23;CL:0000221!1.57e-16!44;CL:0000133!1.57e-16!44;CL:0002319!2.65e-16!43;CL:0000055!4.30e-12!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.40e-28,33;CL:0000047,9.40e-28,33;CL:0000031,9.40e-28,33;CL:0000404,9.40e-28,33;CL:0000117,2.75e-22,23;CL:0000337,2.75e-22,23;CL:0000393,5.64e-22,39;CL:0000211,5.64e-22,39;CL:0002319,4.88e-19,43;CL:0000221,2.17e-18,44;CL:0000133,2.17e-18,44;CL:0002609,3.47e-09,6;CL:0002321,2.78e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.48e-37!102;UBERON:0000924!1.48e-37!102;UBERON:0006601!1.48e-37!102;UBERON:0001017!4.75e-37!73;UBERON:0005743!4.75e-37!73;UBERON:0002346!7.68e-37!71;UBERON:0003075!7.68e-37!71;UBERON:0007284!7.68e-37!71;UBERON:0000073!2.76e-36!75;UBERON:0001016!2.76e-36!75;UBERON:0000033!9.90e-33!63;UBERON:0003056!1.35e-28!49;UBERON:0001049!2.80e-27!52;UBERON:0005068!2.80e-27!52;UBERON:0006241!2.80e-27!52;UBERON:0007135!2.80e-27!52;UBERON:0000955!1.07e-26!50;UBERON:0006238!1.07e-26!50;UBERON:0002616!8.78e-26!49;UBERON:0003080!4.81e-22!40;UBERON:0002780!1.86e-21!39;UBERON:0001890!1.86e-21!39;UBERON:0006240!1.86e-21!39;UBERON:0002020!9.82e-19!34;UBERON:0007811!9.50e-18!86;UBERON:0002791!2.88e-16!29;UBERON:0003528!2.88e-16!29;UBERON:0001893!2.88e-16!29;UBERON:0000153!2.07e-14!94;UBERON:0000956!2.48e-11!21;UBERON:0001869!2.48e-11!21;UBERON:0000203!2.48e-11!21;UBERON:0002619!3.75e-08!17;UBERON:0000970!3.04e-07!9;UBERON:0000019!3.04e-07!9;UBERON:0000047!3.04e-07!9;UBERON:0004088!3.04e-07!9;UBERON:0002104!3.04e-07!9;UBERON:0001456!3.04e-07!9;UBERON:0003072!3.04e-07!9;UBERON:0003071!3.04e-07!9;UBERON:0004128!3.04e-07!9;UBERON:0000020!4.89e-07!12;UBERON:0001032!4.89e-07!12;UBERON:0004456!4.89e-07!12 | |ontology_enrichment_uberon=UBERON:0004121!1.48e-37!102;UBERON:0000924!1.48e-37!102;UBERON:0006601!1.48e-37!102;UBERON:0001017!4.75e-37!73;UBERON:0005743!4.75e-37!73;UBERON:0002346!7.68e-37!71;UBERON:0003075!7.68e-37!71;UBERON:0007284!7.68e-37!71;UBERON:0000073!2.76e-36!75;UBERON:0001016!2.76e-36!75;UBERON:0000033!9.90e-33!63;UBERON:0003056!1.35e-28!49;UBERON:0001049!2.80e-27!52;UBERON:0005068!2.80e-27!52;UBERON:0006241!2.80e-27!52;UBERON:0007135!2.80e-27!52;UBERON:0000955!1.07e-26!50;UBERON:0006238!1.07e-26!50;UBERON:0002616!8.78e-26!49;UBERON:0003080!4.81e-22!40;UBERON:0002780!1.86e-21!39;UBERON:0001890!1.86e-21!39;UBERON:0006240!1.86e-21!39;UBERON:0002020!9.82e-19!34;UBERON:0007811!9.50e-18!86;UBERON:0002791!2.88e-16!29;UBERON:0003528!2.88e-16!29;UBERON:0001893!2.88e-16!29;UBERON:0000153!2.07e-14!94;UBERON:0000956!2.48e-11!21;UBERON:0001869!2.48e-11!21;UBERON:0000203!2.48e-11!21;UBERON:0002619!3.75e-08!17;UBERON:0000970!3.04e-07!9;UBERON:0000019!3.04e-07!9;UBERON:0000047!3.04e-07!9;UBERON:0004088!3.04e-07!9;UBERON:0002104!3.04e-07!9;UBERON:0001456!3.04e-07!9;UBERON:0003072!3.04e-07!9;UBERON:0003071!3.04e-07!9;UBERON:0004128!3.04e-07!9;UBERON:0000020!4.89e-07!12;UBERON:0001032!4.89e-07!12;UBERON:0004456!4.89e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.03e-44,73;UBERON:0002346,2.25e-42,64;UBERON:0003075,2.25e-42,64;UBERON:0007284,2.25e-42,64;UBERON:0001016,2.94e-42,75;UBERON:0004121,5.68e-42,95;UBERON:0000924,5.68e-42,95;UBERON:0006601,5.68e-42,95;UBERON:0010371,4.95e-37,73;UBERON:0003056,7.34e-35,49;UBERON:0000073,2.17e-34,54;UBERON:0001049,1.33e-32,52;UBERON:0005068,1.33e-32,52;UBERON:0006241,1.33e-32,52;UBERON:0007135,1.33e-32,52;UBERON:0000955,3.49e-30,47;UBERON:0006238,3.49e-30,47;UBERON:0002616,6.43e-29,46;UBERON:0003080,2.51e-28,40;UBERON:0002780,1.80e-27,39;UBERON:0001890,1.80e-27,39;UBERON:0006240,1.80e-27,39;UBERON:0010314,4.38e-26,92;UBERON:0002020,5.87e-25,34;UBERON:0003528,1.23e-22,29;UBERON:0002791,1.23e-22,29;UBERON:0001893,1.23e-22,29;UBERON:0000956,6.66e-17,21;UBERON:0001869,6.66e-17,21;UBERON:0000203,6.66e-17,21;UBERON:0002619,3.90e-12,17;UBERON:0002021,8.33e-09,10;UBERON:0000411,8.33e-09,10;UBERON:0001950,8.33e-09,10;UBERON:0000025,3.44e-08,114;UBERON:0004111,1.38e-07,122;UBERON:0000970,5.18e-07,9;UBERON:0000019,5.18e-07,9;UBERON:0000047,5.18e-07,9;UBERON:0010312,5.18e-07,9;UBERON:0004088,5.18e-07,9;UBERON:0002104,5.18e-07,9;UBERON:0001456,5.18e-07,9;UBERON:0003072,5.18e-07,9;UBERON:0004128,5.18e-07,9;UBERON:0003071,5.18e-07,9;UBERON:0002420,7.20e-07,8;UBERON:0007245,7.20e-07,8;UBERON:0010009,7.20e-07,8;UBERON:0010011,7.20e-07,8;UBERON:0000454,7.20e-07,8;UBERON:0000483,8.22e-07,174 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,2.83243045203437,3.1739458756322,3.80298842103708,0,0,0,0,0,0,0,8.8136170462206,9.58542162155004,8.62332341540666,1.99955689082663,1.10434270475807,3.55223317723367,4.69642807989358,6.43453150627015,1.10115880999389,3.19218345212969,2.30409799884365,4.2203612073662,2.74462930807229,4.68822033501084,1.95428099300967,1.68828783009504,2.13917546887534,0.589257170947335,2.56269025438385,2.23679334990361,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0.867426633830679,0.608930956624282,0.691846491768175,0.301445281105245,0.823120949949934,0.125666591329675,0,0,0,0,0,0,0,5.85561594023094,9.21565509979202,0,0,0,0,1.9472783122627,0.915001205637253,2.63874139437015,2.60736480288415,2.30143911597297,2.49345653471472,1.78465389374533,0.101839363850316,0,0,1.26265113531884,0.910843100738926,0.689706313300419,2.88099407688559,4.52114453507145,5.51095643125756,7.55870949680614,10.2134879770104,6.98499100995342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,3.70456604565424,0,0,0.426576501070468,0.696710015581316,0.257734922644187,0.403367049246685,0.444756087689741,0,0,0,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.40654023910644,0,0,1.26203287766503,2.34263246577983,2.36965737506079,0.955875191810208,1.78238939265915,0.566153061577665,6.8817819284732,4.9683495844923,1.97643888973262,5.14114106274891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74483566329167,0.540183282093931,1.29358683782755,1.50035924522115,2.12808280370728,1.60531935841864,1.81003922662333,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.324016022465404,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76195141904306,1.71868654031819,2.92150409984269,2.05524755931193,1.5107877947794,3.37511250115903,3.15224842256954,3.62513927187364,3.62432218226274,1.3492355185943,2.79317411380722,1.87806966329548,1.21553358534147,0.838452650511929,0.919217542250071,0.888986911206461,0.206035057238894,1.28367683836726,0,0,0.754505365544305,0.842773567228942,0.768301828858431,1.14870937911227,1.42888107384922,0.927074607558844,1.35036454324594,0.412085900803307,0.883193520806384,1.02860775715625,1.06485483695602,0.238436189947321,1.0174249164263,1.31753132581463,0.846146078916765,0.914639864363863,0.789209134313529,0.271608227691724,0.561142271657738,1.06771516311757,0.689531376628944,0,0.464810523557898,0.385813221962283,2.24829520144151,0.467863216890817,0.859484216193193,0,0,0 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|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,2.83243045203437,3.1739458756322,3.80298842103708,0,0,0,0,0,0,0,8.8136170462206,9.58542162155004,8.62332341540666,1.99955689082663,1.10434270475807,3.55223317723367,4.69642807989358,6.43453150627015,1.10115880999389,3.19218345212969,2.30409799884365,4.2203612073662,2.74462930807229,4.68822033501084,1.95428099300967,1.68828783009504,2.13917546887534,0.589257170947335,2.56269025438385,2.23679334990361,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0.867426633830679,0.608930956624282,0.691846491768175,0.301445281105245,0.823120949949934,0.125666591329675,0,0,0,0,0,0,0,5.85561594023094,9.21565509979202,0,0,0,0,1.9472783122627,0.915001205637253,2.63874139437015,2.60736480288415,2.30143911597297,2.49345653471472,1.78465389374533,0.101839363850316,0,0,1.26265113531884,0.910843100738926,0.689706313300419,2.88099407688559,4.52114453507145,5.51095643125756,7.55870949680614,10.2134879770104,6.98499100995342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,3.70456604565424,0,0,0.426576501070468,0.696710015581316,0.257734922644187,0.403367049246685,0.444756087689741,0,0,0,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.40654023910644,0,0,1.26203287766503,2.34263246577983,2.36965737506079,0.955875191810208,1.78238939265915,0.566153061577665,6.8817819284732,4.9683495844923,1.97643888973262,5.14114106274891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74483566329167,0.540183282093931,1.29358683782755,1.50035924522115,2.12808280370728,1.60531935841864,1.81003922662333,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.324016022465404,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76195141904306,1.71868654031819,2.92150409984269,2.05524755931193,1.5107877947794,3.37511250115903,3.15224842256954,3.62513927187364,3.62432218226274,1.3492355185943,2.79317411380722,1.87806966329548,1.21553358534147,0.838452650511929,0.919217542250071,0.888986911206461,0.206035057238894,1.28367683836726,0,0,0.754505365544305,0.842773567228942,0.768301828858431,1.14870937911227,1.42888107384922,0.927074607558844,1.35036454324594,0.412085900803307,0.883193520806384,1.02860775715625,1.06485483695602,0.238436189947321,1.0174249164263,1.31753132581463,0.846146078916765,0.914639864363863,0.789209134313529,0.271608227691724,0.561142271657738,1.06771516311757,0.689531376628944,0,0.464810523557898,0.385813221962283,2.24829520144151,0.467863216890817,0.859484216193193,0,0,0 | ||
|short_description=p3@Srrm4 | |short_description=p3@Srrm4 | ||
}} | }} |
Latest revision as of 18:02, 1 October 2015
Short description: | p3@Srrm4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Srrm4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1137 |
Association with transcript: | -41bp_to_ENSMUST00000076124, NM_026886, uc008zfc.1, uc008zfd.1_5end |
EntrezGene: | Srrm4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.40e-28 | 33 |
neuronal stem cell | 9.40e-28 | 33 |
neuroblast | 9.40e-28 | 33 |
electrically signaling cell | 9.40e-28 | 33 |
CNS neuron (sensu Vertebrata) | 2.75e-22 | 23 |
neuroblast (sensu Vertebrata) | 2.75e-22 | 23 |
electrically responsive cell | 5.64e-22 | 39 |
electrically active cell | 5.64e-22 | 39 |
neural cell | 4.88e-19 | 43 |
ectodermal cell | 2.17e-18 | 44 |
neurectodermal cell | 2.17e-18 | 44 |
neuron of cerebral cortex | 3.47e-09 | 6 |
embryonic cell | 2.78e-08 | 70 |